; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G09760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G09760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNADH-ubiquinone oxidoreductase chain 1
Genome locationClcChr10:22038556..22039539
RNA-Seq ExpressionClc10G09760
SyntenyClc10G09760
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0009060 - aerobic respiration (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
InterPro domainsIPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
IPR018086 - NADH:ubiquinone oxidoreductase, subunit 1, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8477452.1 hypothetical protein FH972_025318 [Carpinus fangiana]7.7e-6262.82Show/hide
Query:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV
        +LLTK PSL WGNTAMSSS QDSTPSRAGCRPRWSWKPTYTFLGLA     N  +A K   P+  +K    LG    +T                     
Subjt:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV

Query:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGVDACRGRALFILH
           +        + + +G P              ETNRAPFDLPEAEAE VAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGV AC G ALFILH
Subjt:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGVDACRGRALFILH

Query:  SKLMNVGSGGSALLSKRELGKANSLLGRARGLVK
        SKLMNVGSG SALLSKRELGKANSLLGRARGLVK
Subjt:  SKLMNVGSGGSALLSKRELGKANSLLGRARGLVK

KAF4349930.1 hypothetical protein G4B88_002352 [Cannabis sativa]7.7e-7097.84Show/hide
Query:  RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLA
        RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLA
Subjt:  RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLA

Query:  EANVPGSRGLILTETRGVDACRGRALFILHSKLMNVGSG
        EANVPGSRGLILTETRGV AC GRALFILH KLMNVGSG
Subjt:  EANVPGSRGLILTETRGVDACRGRALFILHSKLMNVGSG

KAG4906012.1 hypothetical protein JHK86_057259 [Glycine max]2.9e-7774.64Show/hide
Query:  SLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCV-----------------------------RLGKHGRA
        +L WG TAMSSS+QDSTPSRAGCRPRWSW+PTYTFLGLA     N  RA K   P+  +K  +                             RLGK GRA
Subjt:  SLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCV-----------------------------RLGKHGRA

Query:  TCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSR
        TCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSR
Subjt:  TCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSR

Query:  GLILTETRG
        GLILTETRG
Subjt:  GLILTETRG

THG18279.1 hypothetical protein TEA_023049 [Camellia sinensis var. sinensis]8.0e-7580.21Show/hide
Query:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV
        MLLTK PSL WGNTAMSSSLQD TPSRA CRPRWSW+PTYTFLGLA          ++   P        RLGKHG+ATCRET TCGSGRGP+YTVLICV
Subjt:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV

Query:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRG
        GPRNSSEIVMAQKQI SGIPLF VLVMFFIS LAETNRAPFDLPEAE ESVAGYNVEYARDAILNS LLAEANV GSRGLILTETRG
Subjt:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRG

TXG46235.1 hypothetical protein EZV62_028266 [Acer yangbiense]6.1e-7583.43Show/hide
Query:  AMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGT---------SPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS
        AMSSSLQDSTPSRAGCRPRWSW+PTYTFLGLA     N  RA K           +P        RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS
Subjt:  AMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGT---------SPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS

Query:  SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR
        SEIVMAQKQIWSGIPLFPVLVMF ISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR
Subjt:  SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR

TrEMBL top hitse value%identityAlignment
A0A4S4ENK5 Uncharacterized protein3.9e-7580.21Show/hide
Query:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV
        MLLTK PSL WGNTAMSSSLQD TPSRA CRPRWSW+PTYTFLGLA          ++   P        RLGKHG+ATCRET TCGSGRGP+YTVLICV
Subjt:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV

Query:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRG
        GPRNSSEIVMAQKQI SGIPLF VLVMFFIS LAETNRAPFDLPEAE ESVAGYNVEYARDAILNS LLAEANV GSRGLILTETRG
Subjt:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRG

A0A5C7GNZ1 Uncharacterized protein3.0e-7583.43Show/hide
Query:  AMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGT---------SPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS
        AMSSSLQDSTPSRAGCRPRWSW+PTYTFLGLA     N  RA K           +P        RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS
Subjt:  AMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGT---------SPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS

Query:  SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR
        SEIVMAQKQIWSGIPLFPVLVMF ISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR
Subjt:  SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR

A0A5C7GPI4 NADH-ubiquinone oxidoreductase chain 13.0e-7583.43Show/hide
Query:  AMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGT---------SPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS
        AMSSSLQDSTPSRAGCRPRWSW+PTYTFLGLA     N  RA K           +P        RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS
Subjt:  AMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGT---------SPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS

Query:  SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR
        SEIVMAQKQIWSGIPLFPVLVMF ISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR
Subjt:  SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETR

A0A5N6L392 Uncharacterized protein3.8e-6262.82Show/hide
Query:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV
        +LLTK PSL WGNTAMSSS QDSTPSRAGCRPRWSWKPTYTFLGLA     N  +A K   P+  +K    LG    +T                     
Subjt:  MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICV

Query:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGVDACRGRALFILH
           +        + + +G P              ETNRAPFDLPEAEAE VAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGV AC G ALFILH
Subjt:  GPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGVDACRGRALFILH

Query:  SKLMNVGSGGSALLSKRELGKANSLLGRARGLVK
        SKLMNVGSG SALLSKRELGKANSLLGRARGLVK
Subjt:  SKLMNVGSGGSALLSKRELGKANSLLGRARGLVK

A0A7J6DW66 NADH-ubiquinone oxidoreductase chain 13.7e-7097.84Show/hide
Query:  RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLA
        RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLA
Subjt:  RLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLA

Query:  EANVPGSRGLILTETRGVDACRGRALFILHSKLMNVGSG
        EANVPGSRGLILTETRGV AC GRALFILH KLMNVGSG
Subjt:  EANVPGSRGLILTETRGVDACRGRALFILHSKLMNVGSG

SwissProt top hitse value%identityAlignment
P08834 NADH-ubiquinone oxidoreductase chain 15.1e-4886.32Show/hide
Query:  LICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRG------LILTETRGVDA
        LICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA DAILNSPLLAEANVPG  G      + L    GVDA
Subjt:  LICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRG------LILTETRGVDA

Query:  CRGRALFILHSKLMNVG
        CRGR LFILHSKLMNVG
Subjt:  CRGRALFILHSKLMNVG

P31839 NADH-ubiquinone oxidoreductase chain 16.0e-2589.23Show/hide
Query:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        TVLICVG  N SEIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAE VAGYNVEY+
Subjt:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA

P92558 NADH-ubiquinone oxidoreductase chain 16.0e-2589.23Show/hide
Query:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        TVLICVG  N SEIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAE VAGYNVEY+
Subjt:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA

Q01148 NADH-ubiquinone oxidoreductase chain 16.0e-2589.23Show/hide
Query:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        TVLICVG  N SEIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAE VAGYNVEY+
Subjt:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA

Q01300 NADH-ubiquinone oxidoreductase chain 16.9e-2996.92Show/hide
Query:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        TVLICVG RNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEY+
Subjt:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA

Arabidopsis top hitse value%identityAlignment
ATCG01100.1 NADH dehydrogenase family protein1.4e-0561.76Show/hide
Query:  VMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        ++F IS LAE  R PFDLPEAE E +AGY  EY+
Subjt:  VMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA

ATMG00516.1 NADH dehydrogenase 1C2.9e-3096.92Show/hide
Query:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMF ISRLAETNRAPFDLPEAEAESVAGYNVEY+
Subjt:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA

ATMG01120.1 NADH dehydrogenase 1B2.9e-3096.92Show/hide
Query:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMF ISRLAETNRAPFDLPEAEAESVAGYNVEY+
Subjt:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA

ATMG01275.1 NADH dehydrogenase 1A2.9e-3096.92Show/hide
Query:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA
        TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMF ISRLAETNRAPFDLPEAEAESVAGYNVEY+
Subjt:  TVLICVGPRNSSEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTCACCAAAAGCCCTTCCTTGGATTGGGGCAACACAGCAATGAGTAGTTCGCTCCAGGACTCCACCCCCTCGAGAGCAGGATGCCGGCCGAGATGGAGC
TGGAAGCCAACCTATACTTTCCTGGGGCTTGCCCCAACATCTAAATCAAATTGTTGGCGGGCTAGAAAAGGAACCAGCCCAGCCTCTTCAAGAAAGCTTTGCGTG
CGCCTCGGAAAGCACGGACGAGCCACATGCAGGGAAACTTGCACGTGTGGTTCTGGCCGCGGACCCCGGTATACTGTACTAATATGTGTAGGTCCCCGTAATTCG
AGTGAGATTGTCATGGCGCAAAAGCAGATATGGTCCGGTATTCCCTTGTTCCCTGTATTGGTTATGTTCTTTATTTCTCGTCTAGCAGAAACTAATCGAGCTCCG
TTTGATCTCCCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCGCGGGATGCGATCCTTAATAGTCCACTGTTGGCGGAAGCCAATGTCCCG
GGGTCCCGGGGACTCATTCTGACTGAAACAAGGGGAGTAGATGCTTGCAGGGGCAGGGCACTCTTCATTCTTCATTCGAAACTAATGAATGTTGGGTCGGGGGGT
TCTGCCTTGTTATCAAAAAGAGAGTTGGGTAAAGCAAACTCCCTCCTTGGACGAGCACGGGGCTTAGTCAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCCTCACCAAAAGCCCTTCCTTGGATTGGGGCAACACAGCAATGAGTAGTTCGCTCCAGGACTCCACCCCCTCGAGAGCAGGATGCCGGCCGAGATGGAGC
TGGAAGCCAACCTATACTTTCCTGGGGCTTGCCCCAACATCTAAATCAAATTGTTGGCGGGCTAGAAAAGGAACCAGCCCAGCCTCTTCAAGAAAGCTTTGCGTG
CGCCTCGGAAAGCACGGACGAGCCACATGCAGGGAAACTTGCACGTGTGGTTCTGGCCGCGGACCCCGGTATACTGTACTAATATGTGTAGGTCCCCGTAATTCG
AGTGAGATTGTCATGGCGCAAAAGCAGATATGGTCCGGTATTCCCTTGTTCCCTGTATTGGTTATGTTCTTTATTTCTCGTCTAGCAGAAACTAATCGAGCTCCG
TTTGATCTCCCAGAAGCGGAAGCTGAATCAGTTGCAGGCTATAATGTAGAATATGCGCGGGATGCGATCCTTAATAGTCCACTGTTGGCGGAAGCCAATGTCCCG
GGGTCCCGGGGACTCATTCTGACTGAAACAAGGGGAGTAGATGCTTGCAGGGGCAGGGCACTCTTCATTCTTCATTCGAAACTAATGAATGTTGGGTCGGGGGGT
TCTGCCTTGTTATCAAAAAGAGAGTTGGGTAAAGCAAACTCCCTCCTTGGACGAGCACGGGGCTTAGTCAAGTAG
Protein sequenceShow/hide protein sequence
MLLTKSPSLDWGNTAMSSSLQDSTPSRAGCRPRWSWKPTYTFLGLAPTSKSNCWRARKGTSPASSRKLCVRLGKHGRATCRETCTCGSGRGPRYTVLICVGPRNS
SEIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNSPLLAEANVPGSRGLILTETRGVDACRGRALFILHSKLMNVGSGG
SALLSKRELGKANSLLGRARGLVK