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Clc10G10310 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G10310
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionindole-3-acetic acid-induced protein ARG2-like
Genome locationClcChr10:23111976..23112525
RNA-Seq ExpressionClc10G10310
SyntenyClc10G10310
Gene Ontology termsNA
InterPro domainsIPR004926 - Late embryogenesis abundant protein, LEA_3 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606955.1 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]7.5e-2263Show/hide
Query:  MPRFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNIIN
        M R  S ++      +LI RGY A + AASQRVAS  AAE V AR+  M+KKEE E STE AAWVPDPVTGYYRPENY D ID VDLRA LLKP  N++N
Subjt:  MPRFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNIIN

KAG7018001.1 Indole-3-acetic acid-induced protein ARG2, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-2161.32Show/hide
Query:  MPRFF------SGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKK-EEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK
        M RFF      SGL+  G  NALI RGYTAE+MAAS+R           AR   MMKK E+AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+
Subjt:  MPRFF------SGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKK-EEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK

Query:  PRGNII
        PR   I
Subjt:  PRGNII

XP_022949042.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita moschata]8.2e-2160Show/hide
Query:  MPRFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNIIN
        M R  S ++      +LI RGY A + AASQRVAS  AAE V AR+  M+KKEE E  TE AAW+PDPVTGYYRPENY + ID VDLRA LLKP+ N++N
Subjt:  MPRFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNIIN

XP_023528769.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Cucurbita pepo subsp. pepo]2.8e-2164.29Show/hide
Query:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEE-AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNII
        +  SGL+  G  NALI RGYTAE+MAASQR           AR   MMKKEE AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+PR   I
Subjt:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEE-AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNII

XP_038903721.1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like [Benincasa hispida]6.5e-3477.14Show/hide
Query:  MPRFFSG-----LLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR
        M  FFSG     L+PHG F+AL  RGYTAE+MAASQRVAS++AAE +PAR++ MMKKEE+E STEKAAWVPDPVTGYYRPENYAD IDAVDLRAKLLKPR
Subjt:  MPRFFSG-----LLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR

Query:  GNIIN
         NIIN
Subjt:  GNIIN

TrEMBL top hitse value%identityAlignment
A0A0A0KV78 Uncharacterized protein5.8e-2058.93Show/hide
Query:  PRFFSG--LLP----HGFFNALIGRGYTAE--SMAASQRVASS--AAAEVVPARTH--IMMKKEEAEISTEKAA-WVPDPVTGYYRPENYADEIDAVDLR
        PRF SG  +LP     GF NA++ RGYTAE  +MAAS+R  +S  AA  V+PA     ++++KEE+E STEKAA W+PDPVTG YRPE+  DE+DAVDLR
Subjt:  PRFFSG--LLP----HGFFNALIGRGYTAE--SMAASQRVASS--AAAEVVPARTH--IMMKKEEAEISTEKAA-WVPDPVTGYYRPENYADEIDAVDLR

Query:  AKLLKPRGNIIN
        AKLLKPR N +N
Subjt:  AKLLKPRGNIIN

A0A1S4DZQ1 indole-3-acetic acid-induced protein ARG2-like3.4e-2060.71Show/hide
Query:  PRFFS------GLLPHGFFNALIGRGYTAE--SMAASQRVAS-SAAAEVVPAR-THIMMKKEEAEISTEK---AAWVPDPVTGYYRPENYADEIDAVDLR
        PRF S      GL+  GF NA+I RGYTAE  +MAAS+RV S SA   V+PA  +  +MKKEE+E ST +   AAW+PDPVTGYYRPENY DE+D VDLR
Subjt:  PRFFS------GLLPHGFFNALIGRGYTAE--SMAASQRVAS-SAAAEVVPAR-THIMMKKEEAEISTEK---AAWVPDPVTGYYRPENYADEIDAVDLR

Query:  AKLLKPRGNIIN
         KLLK R N IN
Subjt:  AKLLKPRGNIIN

A0A6J1F2C1 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like2.0e-2060.38Show/hide
Query:  MPRFF------SGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKK-EEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK
        M RFF      SGL+  G   ALI RGYTAE+MAAS+R           AR   MMKK E+AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA +L+
Subjt:  MPRFF------SGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKK-EEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK

Query:  PRGNII
        PR   I
Subjt:  PRGNII

A0A6J1GAX2 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like4.0e-2160Show/hide
Query:  MPRFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNIIN
        M R  S ++      +LI RGY A + AASQRVAS  AAE V AR+  M+KKEE E  TE AAW+PDPVTGYYRPENY + ID VDLRA LLKP+ N++N
Subjt:  MPRFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNIIN

A0A6J1J9I8 protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial-like3.4e-2062.75Show/hide
Query:  MPRFF------SGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEE-AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK
        M RFF      SGL+  G  NALI RGYTAE+MAASQR           AR   MMKKEE AE S EK AWVPDPVTGYYRPENY+DEIDAVDLRA ++ 
Subjt:  MPRFF------SGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEE-AEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK

Query:  PR
         R
Subjt:  PR

SwissProt top hitse value%identityAlignment
P32292 Indole-3-acetic acid-induced protein ARG22.2e-0839.18Show/hide
Query:  RFFSGLLPHGFFNALIGRGYTAESMA--ASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGN
        +  S L+  GF N     G+ A + A  ++ R  +S    +VP         EE     EK +WVPDPVTGYYRPEN  +EID  D+RA +L  + N
Subjt:  RFFSGLLPHGFFNALIGRGYTAESMA--ASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGN

P46521 Late embryogenesis abundant protein Lea5-A8.3e-0835.48Show/hide
Query:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR
        +F    +    + ++  RGY+    AA         A     R + M +   +E     +AW PDPVTGYYRPEN   EIDA DLR  +L  R
Subjt:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR

P46522 Late embryogenesis abundant protein Lea5-D1.1e-0739.29Show/hide
Query:  GFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR
        G + ++  RGY+    AA         A     R   M +   +E     +AW PDPVTGYYRPEN   EIDA +LR  LL  R
Subjt:  GFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPR

Q93WF6 Protein SENESCENCE-ASSOCIATED GENE 21, mitochondrial1.8e-1044.44Show/hide
Query:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL
        +  S  +     NA+  RGY A   AA   V+S   +  V +    +MKK+  E ST+K +WVPDP TGYYRPE  ++EIDA +LRA LL
Subjt:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL

Q9SRX6 Late embryogenis abundant protein 21.2e-0946.15Show/hide
Query:  NALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL
        NA+  RG+ A +  A     S+A            MKK   E S+EKA WVPDP TGYYRPE  ++EID  +LRA LL
Subjt:  NALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL

Arabidopsis top hitse value%identityAlignment
AT1G02820.1 Late embryogenesis abundant 3 (LEA3) family protein8.2e-1146.15Show/hide
Query:  NALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL
        NA+  RG+ A +  A     S+A            MKK   E S+EKA WVPDP TGYYRPE  ++EID  +LRA LL
Subjt:  NALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL

AT3G53770.1 late embryogenesis abundant 3 (LEA3) family protein2.1e-0663.33Show/hide
Query:  EKAAWVPDPVTGYYRPENYADEIDAVDLRA
        E+  W+PDP TGYYRP+N+A E+DAV+LR+
Subjt:  EKAAWVPDPVTGYYRPENYADEIDAVDLRA

AT4G02380.1 senescence-associated gene 211.3e-1144.44Show/hide
Query:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL
        +  S  +     NA+  RGY A   AA   V+S   +  V +    +MKK+  E ST+K +WVPDP TGYYRPE  ++EIDA +LRA LL
Subjt:  RFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL

AT4G02380.2 senescence-associated gene 211.8e-1050.68Show/hide
Query:  RGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL
        RGY A   AA   V+S   +  V +    +MKK+  E ST+K +WVPDP TGYYRPE  ++EIDA +LRA LL
Subjt:  RGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLL

AT4G15910.1 drought-induced 215.5e-0740.3Show/hide
Query:  MAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK
        +A SQ V ++  ++    R  +   ++       ++AW PDPVTGYYRP N A EID  +LR  LLK
Subjt:  MAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCTTCTTCTCCGGTCTCCTTCCCCATGGATTTTTTAACGCTCTCATCGGGCGTGGATATACGGCGGAATCAATGGCGGCATCACAAAGAGTGGCGTCTAGCGC
GGCGGCGGAAGTAGTTCCGGCACGAACCCACATAATGATGAAGAAAGAAGAAGCAGAAATAAGTACGGAGAAGGCGGCGTGGGTACCAGACCCTGTCACCGGCTACTACC
GGCCGGAGAATTACGCCGATGAGATCGACGCCGTGGATCTTCGTGCTAAGCTATTGAAGCCGAGAGGAAATATAATCAATTAA
mRNA sequenceShow/hide mRNA sequence
GAAAAAATAAGGCTTTCCTTTTTCCCTCTCTTTTTACTCAAAATTTTCCCCAGAAACAAACAGAAAATTTCTTCTGTACAACCCATTCACCATGCCTCGCTTCTTCTCCG
GTCTCCTTCCCCATGGATTTTTTAACGCTCTCATCGGGCGTGGATATACGGCGGAATCAATGGCGGCATCACAAAGAGTGGCGTCTAGCGCGGCGGCGGAAGTAGTTCCG
GCACGAACCCACATAATGATGAAGAAAGAAGAAGCAGAAATAAGTACGGAGAAGGCGGCGTGGGTACCAGACCCTGTCACCGGCTACTACCGGCCGGAGAATTACGCCGA
TGAGATCGACGCCGTGGATCTTCGTGCTAAGCTATTGAAGCCGAGAGGAAATATAATCAATTAAATTAAAGGAATAAAAAAGCAAAAGTTTGGATGCGTC
Protein sequenceShow/hide protein sequence
MPRFFSGLLPHGFFNALIGRGYTAESMAASQRVASSAAAEVVPARTHIMMKKEEAEISTEKAAWVPDPVTGYYRPENYADEIDAVDLRAKLLKPRGNIIN