; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G10530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G10530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:23630059..23633671
RNA-Seq ExpressionClc10G10530
SyntenyClc10G10530
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041004.1 hypothetical protein E6C27_scaffold125G002220 [Cucumis melo var. makuwa]1.5e-2143.5Show/hide
Query:  MESSFTTELKAIKDMLMLIMKA--KSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSGGEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRA
        MESSFT EL AIK++LM ++K        DQ+VDD +    T I  +S+D        +IP+++S G                   EV+ KE  TRK+  
Subjt:  MESSFTTELKAIKDMLMLIMKA--KSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSGGEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRA

Query:  LWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDIFIDDN
        L KL+S ++ Q   KKR KKV+PYNP  KIL KF+KQFFAYL +PRR  E R  V  ++ L WF +LLTP  F +DN
Subjt:  LWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDIFIDDN

KAA0051324.1 hypothetical protein E6C27_scaffold55G00410 [Cucumis melo var. makuwa]7.4e-0828.28Show/hide
Query:  LESKLDRMESSFTTELKAIKDMLMLIMKAKSVAKDQS-----------------VDDPLAHDPTPIDSNSDDGEDTAGPLV------IPINVSSGGEDMP
        +++ + RM+S  + +L  IK +LM ++K K+V   Q                  VDD   + P PI       E+    +       + I+V S GED+ 
Subjt:  LESKLDRMESSFTTELKAIKDMLMLIMKAKSVAKDQS-----------------VDDPLAHDPTPIDSNSDDGEDTAGPLV------IPINVSSGGEDMP

Query:  LENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDI
              ++ L   P     E+     +  +    ++  + T +KRD + K   PM     KF+KQF AYL++PR+  E +  V S + L WFM+LL+P  
Subjt:  LENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDI

Query:  FIDDN----------------------KFRRHSPRLYEEIKRGN
        F+D++                       F R S  LYEEIKRGN
Subjt:  FIDDN----------------------KFRRHSPRLYEEIKRGN

KAA0063468.1 hypothetical protein E6C27_scaffold977G00560 [Cucumis melo var. makuwa]5.8e-0527.34Show/hide
Query:  PAMTTSPGSRSTCDCSQHLQRLESKLD-------RMESSFTTELKAIKDMLMLIMKAKSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSG
        P  T  P   +TCDCSQ++ RLE +LD       R+ESS + EL AIK +LM ++K + +  + ++    + D     S S+D  D     +I I+V S 
Subjt:  PAMTTSPGSRSTCDCSQHLQRLESKLD-------RMESSFTTELKAIKDMLMLIMKAKSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSG

Query:  GEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNL
        G+D+P            PP+ + K  P  +K    K   L    P    +DK+++                      P+   E    + S   L WF++L
Subjt:  GEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNL

Query:  LTPDIFIDDN------------------------------KFRRHSPRLYEEIKRG
        LTP  F DD+                               F R +P LYEE++RG
Subjt:  LTPDIFIDDN------------------------------KFRRHSPRLYEEIKRG

TrEMBL top hitse value%identityAlignment
A0A5A7U7N5 Uncharacterized protein3.6e-0828.28Show/hide
Query:  LESKLDRMESSFTTELKAIKDMLMLIMKAKSVAKDQS-----------------VDDPLAHDPTPIDSNSDDGEDTAGPLV------IPINVSSGGEDMP
        +++ + RM+S  + +L  IK +LM ++K K+V   Q                  VDD   + P PI       E+    +       + I+V S GED+ 
Subjt:  LESKLDRMESSFTTELKAIKDMLMLIMKAKSVAKDQS-----------------VDDPLAHDPTPIDSNSDDGEDTAGPLV------IPINVSSGGEDMP

Query:  LENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDI
              ++ L   P     E+     +  +    ++  + T +KRD + K   PM     KF+KQF AYL++PR+  E +  V S + L WFM+LL+P  
Subjt:  LENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDI

Query:  FIDDN----------------------KFRRHSPRLYEEIKRGN
        F+D++                       F R S  LYEEIKRGN
Subjt:  FIDDN----------------------KFRRHSPRLYEEIKRGN

A0A5D3BBM3 Uncharacterized protein2.8e-0527.34Show/hide
Query:  PAMTTSPGSRSTCDCSQHLQRLESKLD-------RMESSFTTELKAIKDMLMLIMKAKSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSG
        P  T  P   +TCDCSQ++ RLE +LD       R+ESS + EL AIK +LM ++K + +  + ++    + D     S S+D  D     +I I+V S 
Subjt:  PAMTTSPGSRSTCDCSQHLQRLESKLD-------RMESSFTTELKAIKDMLMLIMKAKSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSG

Query:  GEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNL
        G+D+P            PP+ + K  P  +K    K   L    P    +DK+++                      P+   E    + S   L WF++L
Subjt:  GEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNL

Query:  LTPDIFIDDN------------------------------KFRRHSPRLYEEIKRG
        LTP  F DD+                               F R +P LYEE++RG
Subjt:  LTPDIFIDDN------------------------------KFRRHSPRLYEEIKRG

A0A5D3DA67 Uncharacterized protein7.4e-2243.5Show/hide
Query:  MESSFTTELKAIKDMLMLIMKA--KSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSGGEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRA
        MESSFT EL AIK++LM ++K        DQ+VDD +    T I  +S+D        +IP+++S G                   EV+ KE  TRK+  
Subjt:  MESSFTTELKAIKDMLMLIMKA--KSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSGGEDMPLENDSNVIPLSQPPEVVHKEMPTRKKRA

Query:  LWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDIFIDDN
        L KL+S ++ Q   KKR KKV+PYNP  KIL KF+KQFFAYL +PRR  E R  V  ++ L WF +LLTP  F +DN
Subjt:  LWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDIFIDDN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACACGCCCACCCGAGATTGCCCCACCTGCGATGACGACATCTCCTGGTTCTCGTTCGACGTGTGATTGTAGTCAACACTTACAACGATTGGAAAGTAAATTGGATCG
AATGGAGTCCTCATTTACAACTGAGCTGAAGGCCATAAAGGACATGTTGATGCTGATAATGAAGGCAAAATCGGTTGCCAAAGATCAATCTGTTGATGATCCACTTGCTC
ATGATCCCACTCCCATAGACTCAAACTCGGACGATGGCGAAGATACAGCTGGTCCATTAGTCATCCCTATAAATGTATCATCAGGTGGTGAAGATATGCCCTTGGAGAAT
GACAGCAACGTCATTCCGTTGTCTCAGCCACCAGAAGTGGTTCATAAGGAAATGCCCACGAGAAAGAAAAGAGCTTTATGGAAGCTCCGTAGTCTAATGATGGATCAACC
GACTAATAAGAAGAGGGATAAAAAAGTGAAACCATATAATCCGATGGCTAAGATACTAACCAAGTTTGAGAAGCAGTTTTTTGCATATCTTGCAAACCCTAGACGGGTCA
ATGAGACTCGTGGGATTGTTATGAGCATACAGAAGCTGTTATGGTTTATGAACTTGCTGACACCGGACATTTTCATCGATGACAATAAGTTTCGAAGGCATAGCCCCAGG
TTGTATGAAGAGATTAAGAGGGGTAATGCCTTTGGAGAGGCAGTTGTTGGTATGGGATTCTATGATATCTTTGGCCTCGGATGCGGAACTGTCGAAGGAACTGATAACAT
GCAGACACTACTTCCAGCTCTACTGGATAGGGTCGGGATCATAGTAGCAAAGCCTACCCTGCCTGTGACACCATGGAGATTGTATCGAATGAAGACAACACCACAACAAT
CTACAAGGGATGACTTGAATCCATCTAACTGCTCTCTACAAGCTAAGCTCGACATGTCTTCCGATTATGCCCAACATTACGACATTGACTACACTTGTGAACCTGTTTCT
GTATTTCACCGTTTGATGGGATTCATACAGTTGGATGACAACCGACTGTTCCAACGAGCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACACGCCCACCCGAGATTGCCCCACCTGCGATGACGACATCTCCTGGTTCTCGTTCGACGTGTGATTGTAGTCAACACTTACAACGATTGGAAAGTAAATTGGATCG
AATGGAGTCCTCATTTACAACTGAGCTGAAGGCCATAAAGGACATGTTGATGCTGATAATGAAGGCAAAATCGGTTGCCAAAGATCAATCTGTTGATGATCCACTTGCTC
ATGATCCCACTCCCATAGACTCAAACTCGGACGATGGCGAAGATACAGCTGGTCCATTAGTCATCCCTATAAATGTATCATCAGGTGGTGAAGATATGCCCTTGGAGAAT
GACAGCAACGTCATTCCGTTGTCTCAGCCACCAGAAGTGGTTCATAAGGAAATGCCCACGAGAAAGAAAAGAGCTTTATGGAAGCTCCGTAGTCTAATGATGGATCAACC
GACTAATAAGAAGAGGGATAAAAAAGTGAAACCATATAATCCGATGGCTAAGATACTAACCAAGTTTGAGAAGCAGTTTTTTGCATATCTTGCAAACCCTAGACGGGTCA
ATGAGACTCGTGGGATTGTTATGAGCATACAGAAGCTGTTATGGTTTATGAACTTGCTGACACCGGACATTTTCATCGATGACAATAAGTTTCGAAGGCATAGCCCCAGG
TTGTATGAAGAGATTAAGAGGGGTAATGCCTTTGGAGAGGCAGTTGTTGGTATGGGATTCTATGATATCTTTGGCCTCGGATGCGGAACTGTCGAAGGAACTGATAACAT
GCAGACACTACTTCCAGCTCTACTGGATAGGGTCGGGATCATAGTAGCAAAGCCTACCCTGCCTGTGACACCATGGAGATTGTATCGAATGAAGACAACACCACAACAAT
CTACAAGGGATGACTTGAATCCATCTAACTGCTCTCTACAAGCTAAGCTCGACATGTCTTCCGATTATGCCCAACATTACGACATTGACTACACTTGTGAACCTGTTTCT
GTATTTCACCGTTTGATGGGATTCATACAGTTGGATGACAACCGACTGTTCCAACGAGCGTAG
Protein sequenceShow/hide protein sequence
MTRPPEIAPPAMTTSPGSRSTCDCSQHLQRLESKLDRMESSFTTELKAIKDMLMLIMKAKSVAKDQSVDDPLAHDPTPIDSNSDDGEDTAGPLVIPINVSSGGEDMPLEN
DSNVIPLSQPPEVVHKEMPTRKKRALWKLRSLMMDQPTNKKRDKKVKPYNPMAKILTKFEKQFFAYLANPRRVNETRGIVMSIQKLLWFMNLLTPDIFIDDNKFRRHSPR
LYEEIKRGNAFGEAVVGMGFYDIFGLGCGTVEGTDNMQTLLPALLDRVGIIVAKPTLPVTPWRLYRMKTTPQQSTRDDLNPSNCSLQAKLDMSSDYAQHYDIDYTCEPVS
VFHRLMGFIQLDDNRLFQRA