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Clc10G10880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G10880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDihydroorotate dehydrogenase, putative
Genome locationClcChr10:24150709..24154148
RNA-Seq ExpressionClc10G10880
SyntenyClc10G10880
Gene Ontology termsNA
InterPro domainsIPR009297 - Protein of unknown function DUF952


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606920.1 hypothetical protein SDJN03_00262, partial [Cucurbita argyrosperma subsp. sororia]5.3e-5079.84Show/hide
Query:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF
        MAG++EQ  S  A  EEFVYRIS SKEW+ SQ +G+++GG+ D SSGFIHLSNLNQVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVD SNSFPHF
Subjt:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF

Query:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA
        YG SRSFSPIP++AVTKAEKLTFSDGRFA
Subjt:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA

XP_004150836.1 uncharacterized protein LOC101207691 [Cucumis sativus]6.0e-5483.97Show/hide
Query:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG
        MA QNE+  SA TEEFVYRISTSKEWDES R+GHI GG LDKSSGFIHLSNL+QVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVD  NSFPHFYG
Subjt:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG

Query:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI
         SRSFSPIPM+AVT ++K+TFSDGRFA  L+
Subjt:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI

XP_008447457.1 PREDICTED: uncharacterized protein LOC103489901 [Cucumis melo]1.7e-5686.26Show/hide
Query:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG
        MA QNE   SAATEEFVYRISTSKEWDESQR+GHIYGG LDKSSGFIHLSNLNQVQSTLQNFFLN+KD+LYLLQIEAKKLGDGLIYELVD  NSFPHFYG
Subjt:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG

Query:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI
         SRSFSPIPM+AVTKA+K+TFSDGRF+  L+
Subjt:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI

XP_022998502.1 uncharacterized protein LOC111493116 [Cucurbita maxima]6.9e-5079.84Show/hide
Query:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF
        MAGQ+EQ  S  A  EEFVYRIS SKEW+ SQ +G+++GG+ D SSGFIHLSNLNQVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVD SNSFPHF
Subjt:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF

Query:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA
        YG SRSFSPIP++AVTKAEKLTFSDG+FA
Subjt:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA

XP_038905017.1 uncharacterized protein LOC120091189 [Benincasa hispida]1.1e-5892.06Show/hide
Query:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG
        MAGQNE+ KSAATE+FVYRISTSKEWDESQR+GHIYGG+ DKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVD SNSFPHFYG
Subjt:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG

Query:  SSRSFSPIPMEAVTKAEKLTFSDGRF
         SRSF PIPM+AVTKAEKLTFSDGRF
Subjt:  SSRSFSPIPMEAVTKAEKLTFSDGRF

TrEMBL top hitse value%identityAlignment
A0A0A0LER0 Uncharacterized protein2.9e-5483.97Show/hide
Query:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG
        MA QNE+  SA TEEFVYRISTSKEWDES R+GHI GG LDKSSGFIHLSNL+QVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVD  NSFPHFYG
Subjt:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG

Query:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI
         SRSFSPIPM+AVT ++K+TFSDGRFA  L+
Subjt:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI

A0A1S3BHG9 uncharacterized protein LOC1034899018.2e-5786.26Show/hide
Query:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG
        MA QNE   SAATEEFVYRISTSKEWDESQR+GHIYGG LDKSSGFIHLSNLNQVQSTLQNFFLN+KD+LYLLQIEAKKLGDGLIYELVD  NSFPHFYG
Subjt:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG

Query:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI
         SRSFSPIPM+AVTKA+K+TFSDGRF+  L+
Subjt:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI

A0A5D3DA97 Uncharacterized protein8.2e-5786.26Show/hide
Query:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG
        MA QNE   SAATEEFVYRISTSKEWDESQR+GHIYGG LDKSSGFIHLSNLNQVQSTLQNFFLN+KD+LYLLQIEAKKLGDGLIYELVD  NSFPHFYG
Subjt:  MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYG

Query:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI
         SRSFSPIPM+AVTKA+K+TFSDGRF+  L+
Subjt:  SSRSFSPIPMEAVTKAEKLTFSDGRFAFFLI

A0A6J1GAQ2 uncharacterized protein LOC1114524433.3e-5079.84Show/hide
Query:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF
        MAG++EQ  S  A  EEFVYRIS SKEW+ SQ +G+++GG+ D SSGFIHLSNLNQVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVD SNSFPHF
Subjt:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF

Query:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA
        YG SRSFSPIP++AVTKAEKLTFSDGRFA
Subjt:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA

A0A6J1K865 uncharacterized protein LOC1114931163.3e-5079.84Show/hide
Query:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF
        MAGQ+EQ  S  A  EEFVYRIS SKEW+ SQ +G+++GG+ D SSGFIHLSNLNQVQSTLQNFFLN K+ELYLLQIEAKKLGDGL+YELVD SNSFPHF
Subjt:  MAGQNEQAKS--AATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHF

Query:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA
        YG SRSFSPIP++AVTKAEKLTFSDG+FA
Subjt:  YGSSRSFSPIPMEAVTKAEKLTFSDGRFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G01897.1 unknown protein2.9e-3860.87Show/hide
Query:  ATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYGSSRSFSPIPME
        A EEF+YRIST +EW+E ++ G  YG E+DKS+ + HLS L+QVQ TL+NFF+++K+ LYLLQ++ KKLGDGLIYE VD+ NSFPHFYG  ++F P+P++
Subjt:  ATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYGSSRSFSPIPME

Query:  AVTKAEKLTFSDGRF
        +V KAEKLTF +G F
Subjt:  AVTKAEKLTFSDGRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCCAGAATGAGCAAGCAAAATCTGCAGCTACGGAAGAGTTTGTATACAGAATCAGCACATCCAAGGAGTGGGATGAATCACAGCGCATTGGTCATATCTATGG
AGGAGAGCTCGACAAGTCGTCCGGTTTCATTCATCTCAGTAACCTCAATCAGGTCCAATCAACCTTGCAGAATTTCTTCCTGAATATCAAAGATGAATTGTATCTCCTTC
AAATTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGATTCCAATAGCTTCCCTCATTTCTATGGTTCGTCGCGAAGCTTCAGTCCTATCCCTATG
GAGGCAGTAACCAAAGCAGAGAAACTCACCTTTTCTGATGGTCGATTTGCTTTTTTTTTGATACTCAGGTTTCTCTCCACCATTCTGCTACAAGTTAAAGCAACTTACCA
CCAACTTGCATTTGAACTAGACAGAAATTTGAAATGGACAAATTTCCCCATAACGGACAGAAATTTTAGTTTCTTGGAAAGAGGCTTTGAGTGCTTTACTAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGCCAGAATGAGCAAGCAAAATCTGCAGCTACGGAAGAGTTTGTATACAGAATCAGCACATCCAAGGAGTGGGATGAATCACAGCGCATTGGTCATATCTATGG
AGGAGAGCTCGACAAGTCGTCCGGTTTCATTCATCTCAGTAACCTCAATCAGGTCCAATCAACCTTGCAGAATTTCTTCCTGAATATCAAAGATGAATTGTATCTCCTTC
AAATTGAGGCCAAAAAGCTTGGTGATGGATTGATTTATGAACTTGTGGATGATTCCAATAGCTTCCCTCATTTCTATGGTTCGTCGCGAAGCTTCAGTCCTATCCCTATG
GAGGCAGTAACCAAAGCAGAGAAACTCACCTTTTCTGATGGTCGATTTGCTTTTTTTTTGATACTCAGGTTTCTCTCCACCATTCTGCTACAAGTTAAAGCAACTTACCA
CCAACTTGCATTTGAACTAGACAGAAATTTGAAATGGACAAATTTCCCCATAACGGACAGAAATTTTAGTTTCTTGGAAAGAGGCTTTGAGTGCTTTACTAGCTGA
Protein sequenceShow/hide protein sequence
MAGQNEQAKSAATEEFVYRISTSKEWDESQRIGHIYGGELDKSSGFIHLSNLNQVQSTLQNFFLNIKDELYLLQIEAKKLGDGLIYELVDDSNSFPHFYGSSRSFSPIPM
EAVTKAEKLTFSDGRFAFFLILRFLSTILLQVKATYHQLAFELDRNLKWTNFPITDRNFSFLERGFECFTS