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Clc10G11480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G11480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPeptidylprolyl isomerase
Genome locationClcChr10:24903796..24904651
RNA-Seq ExpressionClc10G11480
SyntenyClc10G11480
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat
IPR039663 - AIP/AIPL1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048366.1 peptidyl-prolyl cis-trans isomerase FKBP42 [Cucumis melo var. makuwa]4.7e-4991.96Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDE+NAKALFRRGKARAELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQ LIS  
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRL KREKHHGD
Subjt:  YRLFKREKHHGD

XP_004149717.1 peptidyl-prolyl cis-trans isomerase FKBP42 [Cucumis sativus]3.3e-5093.81Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQWLIS  
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKR-EKHHGD
        YRLFKR EKHHGD
Subjt:  YRLFKR-EKHHGD

XP_008461808.1 PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP42 [Cucumis melo]4.7e-4991.96Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDE+NAKALFRRGKARAELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQ LIS  
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRL KREKHHGD
Subjt:  YRLFKREKHHGD

XP_022949014.1 peptidyl-prolyl cis-trans isomerase FKBP42 [Cucurbita moschata]1.0e-4890.18Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVL EDE+N KALFRRGKAR ELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQWLISL 
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRLFKREK H D
Subjt:  YRLFKREKHHGD

XP_038905372.1 peptidyl-prolyl cis-trans isomerase FKBP42 [Benincasa hispida]5.0e-5193.75Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDE+N KALFRRGKARAELGQTDAAREDLLKARK  PEDKAIARELK LAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQWLISL 
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRLFKREKHHGD
Subjt:  YRLFKREKHHGD

TrEMBL top hitse value%identityAlignment
A0A0A0L9T6 Peptidylprolyl isomerase1.6e-5093.81Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQWLIS  
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKR-EKHHGD
        YRLFKR EKHHGD
Subjt:  YRLFKR-EKHHGD

A0A1S3CGW2 Peptidylprolyl isomerase2.3e-4991.96Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDE+NAKALFRRGKARAELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQ LIS  
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRL KREKHHGD
Subjt:  YRLFKREKHHGD

A0A5A7U2B0 Peptidylprolyl isomerase2.3e-4991.96Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDE+NAKALFRRGKARAELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQ LIS  
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRL KREKHHGD
Subjt:  YRLFKREKHHGD

A0A6J1DGV1 Peptidylprolyl isomerase1.5e-4887.5Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVLAEDE+NAKALFRRGKARAELGQTDAA+EDLLKARK  PEDKAI RELKLLAEH+KAVYQKQKEIYKGIFGPRP+PKPKHG+IVT+LIL+WQW+ISL 
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRLFKREKH  D
Subjt:  YRLFKREKHHGD

A0A6J1GBK8 Peptidylprolyl isomerase5.1e-4990.18Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        MVL EDE+N KALFRRGKAR ELGQTDAAREDLLKARK  PEDKAI RELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVT+LILIWQWLISL 
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
        YRLFKREK H D
Subjt:  YRLFKREKHHGD

SwissProt top hitse value%identityAlignment
Q08752 Peptidyl-prolyl cis-trans isomerase D1.6e-0443.28Show/hide
Query:  DESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIF
        D SN KAL+RR +    L + D A  DL KA+   PEDKAI  EL  + +  KA   K+K +Y  +F
Subjt:  DESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIF

Q9LDC0 Peptidyl-prolyl cis-trans isomerase FKBP424.0e-2756.25Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        +VL E+E N KALFRRGKA+AELGQ D+AR+D  KA+K  P+DKAI REL+ LAE +KA+YQKQKE+YKGIF  + E   K   +   LI++WQW +SL 
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
         R+F+R +   D
Subjt:  YRLFKREKHHGD

Arabidopsis top hitse value%identityAlignment
AT3G21640.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein2.9e-2856.25Show/hide
Query:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL
        +VL E+E N KALFRRGKA+AELGQ D+AR+D  KA+K  P+DKAI REL+ LAE +KA+YQKQKE+YKGIF  + E   K   +   LI++WQW +SL 
Subjt:  MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLL

Query:  YRLFKREKHHGD
         R+F+R +   D
Subjt:  YRLFKREKHHGD

AT3G25230.1 rotamase FKBP 16.4e-0435.21Show/hide
Query:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIF
        VL  + +N KAL+RR +A  EL   D A  D+ KA +  P ++ +  E K L E  K   +K+ + Y  +F
Subjt:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIF

AT3G25230.2 rotamase FKBP 16.4e-0435.21Show/hide
Query:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIF
        VL  + +N KAL+RR +A  EL   D A  D+ KA +  P ++ +  E K L E  K   +K+ + Y  +F
Subjt:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIF

AT5G21990.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.9e-0446.3Show/hide
Query:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAE
        VL  D  N KAL+RRG+A  +LG  + A  DL KA + +PED+ IA  L+ + E
Subjt:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAE

AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein4.9e-0433.77Show/hide
Query:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEP
        VL  D  N KA++RR  A  E    D A  D+ KA +  P++K +  E K L E  K   +K  + Y  +     EP
Subjt:  VLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTGGCAGAGGATGAAAGCAATGCCAAGGCCTTGTTCAGACGGGGTAAGGCTAGAGCAGAACTCGGGCAAACCGACGCAGCTCGGGAAGACTTACTAAAA
GCACGCAAATGCACACCTGAAGACAAGGCAATCGCAAGGGAGCTAAAATTGCTTGCTGAACATGACAAGGCTGTTTATCAAAAACAAAAGGAGATCTACAAAGGA
ATTTTTGGTCCGAGGCCCGAGCCAAAACCGAAGCATGGCGTAATTGTGACTCGGCTTATCCTTATTTGGCAATGGTTGATATCACTTTTGTACCGTCTCTTCAAG
CGTGAAAAACACCATGGTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTATTGGCAGAGGATGAAAGCAATGCCAAGGCCTTGTTCAGACGGGGTAAGGCTAGAGCAGAACTCGGGCAAACCGACGCAGCTCGGGAAGACTTACTAAAA
GCACGCAAATGCACACCTGAAGACAAGGCAATCGCAAGGGAGCTAAAATTGCTTGCTGAACATGACAAGGCTGTTTATCAAAAACAAAAGGAGATCTACAAAGGA
ATTTTTGGTCCGAGGCCCGAGCCAAAACCGAAGCATGGCGTAATTGTGACTCGGCTTATCCTTATTTGGCAATGGTTGATATCACTTTTGTACCGTCTCTTCAAG
CGTGAAAAACACCATGGTGACTAG
Protein sequenceShow/hide protein sequence
MVLAEDESNAKALFRRGKARAELGQTDAAREDLLKARKCTPEDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPKPKHGVIVTRLILIWQWLISLLYRLFK
REKHHGD