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Clc10G12090 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G12090
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:25509563..25514812
RNA-Seq ExpressionClc10G12090
SyntenyClc10G12090
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581619.1 hypothetical protein SDJN03_21621, partial [Cucurbita argyrosperma subsp. sororia]3.7e-1266.67Show/hide
Query:  MGVYACLLISLLLILQTVWISSLSNASNSFQYESLSNSNHSFNSLPPLQPHHHHHHQLLLV--NGGEENKTAESWVVLKAKGGRSGSAGA
        MGVYACLLISLLLI QT  ISSLSN        SL  SNHSFNS  PLQ    HHHQLL+   + GEEN T    VVLKAKGGRSGSAGA
Subjt:  MGVYACLLISLLLILQTVWISSLSNASNSFQYESLSNSNHSFNSLPPLQPHHHHHHQLLLV--NGGEENKTAESWVVLKAKGGRSGSAGA
KGN58897.2 hypothetical protein Csa_001334 [Cucumis sativus]2.1e-1568.48Show/hide
Query:  MGVYACLLISLLLILQTVWISSLSNAS-NSFQYESLSNSNHSFNSLPPLQPHHHHHHQLLLVNGGEENK--TAESWVVLKAK-GGRSGSAGA
        MGVYACLLISLLLILQTVWISSLSNAS NSF YESLSN        PPLQ HH H    L   G EEN    AESW V KAK GGRSG+ GA
Subjt:  MGVYACLLISLLLILQTVWISSLSNAS-NSFQYESLSNSNHSFNSLPPLQPHHHHHHQLLLVNGGEENK--TAESWVVLKAK-GGRSGSAGA
TrEMBL top hitse value%identityAlignment
A0A0A0LCI5 Uncharacterized protein2.1e-1669.15Show/hide
Query:  MGVYACLLISLLLILQTVWISSLSNAS-NSFQYESLSNSNHSFNSLPPLQPHHHHHHQLLLVNGG---EENKT-AESWVVLKAK-GGRSGSAGA
        MGVYACLLISLLLILQTVWISSLSNAS NSF YESLSN        PPLQ HH H    L+  GG   E NKT AESW V KAK GGRSG+ GA
Subjt:  MGVYACLLISLLLILQTVWISSLSNAS-NSFQYESLSNSNHSFNSLPPLQPHHHHHHQLLLVNGG---EENKT-AESWVVLKAK-GGRSGSAGA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTATATGCATGCCTCCTTATTTCCCTCTTATTAATCCTTCAAACTGTATGGATTTCATCCCTTTCCAATGCTTCTAATTCTTTTCAATATGAATCTCTTTCCAA
TTCCAACCACTCATTCAACTCTCTCCCTCCTCTTCAACCCCATCATCATCATCATCATCAACTACTTTTGGTGAACGGCGGAGAAGAGAATAAGACGGCGGAGAGTTGGG
TTGTTTTAAAAGCTAAAGGAGGAAGGTCCGGCAGCGCGGGGGCAGAGATTGGGCTTGATATTGATAGGAAAGAGGAGTTGCTTAGCCCTTTTAATGGTCCGAATTTCTGG
ATTATGTATGTCGATGCAGTTTGCCAGGTTAGGGAGGAAATAACAGGTTTTGGAGCAATCTTGTTAGATGAGAAGGCAACGATGAAAGGAGCGGAGTACTGTGAAGGCAA
CGATGAAAGGAGCGGAGTACTGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTATATGCATGCCTCCTTATTTCCCTCTTATTAATCCTTCAAACTGTATGGATTTCATCCCTTTCCAATGCTTCTAATTCTTTTCAATATGAATCTCTTTCCAA
TTCCAACCACTCATTCAACTCTCTCCCTCCTCTTCAACCCCATCATCATCATCATCATCAACTACTTTTGGTGAACGGCGGAGAAGAGAATAAGACGGCGGAGAGTTGGG
TTGTTTTAAAAGCTAAAGGAGGAAGGTCCGGCAGCGCGGGGGCAGAGATTGGGCTTGATATTGATAGGAAAGAGGAGTTGCTTAGCCCTTTTAATGGTCCGAATTTCTGG
ATTATGTATGTCGATGCAGTTTGCCAGGTTAGGGAGGAAATAACAGGTTTTGGAGCAATCTTGTTAGATGAGAAGGCAACGATGAAAGGAGCGGAGTACTGTGAAGGCAA
CGATGAAAGGAGCGGAGTACTGTTTTAG
Protein sequenceShow/hide protein sequence
MGVYACLLISLLLILQTVWISSLSNASNSFQYESLSNSNHSFNSLPPLQPHHHHHHQLLLVNGGEENKTAESWVVLKAKGGRSGSAGAEIGLDIDRKEELLSPFNGPNFW
IMYVDAVCQVREEITGFGAILLDEKATMKGAEYCEGNDERSGVLF