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Clc10G14550 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G14550
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:28210998..28211790
RNA-Seq ExpressionClc10G14550
SyntenyClc10G14550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588364.1 hypothetical protein SDJN03_16929, partial [Cucurbita argyrosperma subsp. sororia]8.3e-2273.81Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKW--RMMMMETMDYSDPEPNTNVK-GGYVSPPPP
        MGRS FLS LLLS++IA CF+NGFG  +RM+E VD+HHGS V L +ESG +   RMMMMETMDYSDPEPNTNVK GGYVSPPPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKW--RMMMMETMDYSDPEPNTNVK-GGYVSPPPP

OVA09827.1 hypothetical protein BVC80_1753g22 [Macleaya cordata]1.0e-1155.56Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP
        MGRSYFL FLL S V+ALC S GFGR L  +E  D    S VLLE+ +G+  +  M+E MDY+DPE NTN + GY+  PPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP

RXH69314.1 hypothetical protein DVH24_037098 [Malus domestica]2.5e-1049.38Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP
        MGR +FL FL++S ++ALCFS+GFGR  ++VE  +    S VL+ +E+  K R  M+  MDY+DPEPN N + GY+  PPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP

XP_011652234.1 uncharacterized protein LOC105435001 [Cucumis sativus]4.1e-2983.91Show/hide
Query:  MGRSYFLS-FLLLSIVIALCFSNGFGRNLRM-VEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPPPNRG
        MGRS FLS  LLLS +I LCFSNGFGRNLRM VE +DSHH SRVLLE ESGRKWRMM METMDY+DPEPNTNVKGGYVSPPPPPN G
Subjt:  MGRSYFLS-FLLLSIVIALCFSNGFGRNLRM-VEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPPPNRG

XP_041004488.1 uncharacterized protein LOC121249761 isoform X2 [Juglans microcarpa x Juglans regia]4.3e-1051.85Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP
        MGRS FL+ LL+S ++ LCFS+GFGR  +++E V+ H  S   +E+ +  K R MM+E MDYSDP PNTN + GY+  PPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP

TrEMBL top hitse value%identityAlignment
A0A0A0LCS0 Uncharacterized protein2.0e-2983.91Show/hide
Query:  MGRSYFLS-FLLLSIVIALCFSNGFGRNLRM-VEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPPPNRG
        MGRS FLS  LLLS +I LCFSNGFGRNLRM VE +DSHH SRVLLE ESGRKWRMM METMDY+DPEPNTNVKGGYVSPPPPPN G
Subjt:  MGRSYFLS-FLLLSIVIALCFSNGFGRNLRM-VEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPPPNRG

A0A200QHE3 Uncharacterized protein4.9e-1255.56Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP
        MGRSYFL FLL S V+ALC S GFGR L  +E  D    S VLLE+ +G+  +  M+E MDY+DPE NTN + GY+  PPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP

A0A498HG62 Uncharacterized protein1.2e-1049.38Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP
        MGR +FL FL++S ++ALCFS+GFGR  ++VE  +    S VL+ +E+  K R  M+  MDY+DPEPN N + GY+  PPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP

A0A540L840 Uncharacterized protein1.7e-0948.15Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP
        MGR +FL FL++S ++ALCFS+G GR  ++VE  +    S VL+ +E+  K R  M   MDY+DPEPN N + GY+  PPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP

A0A540M3Y6 Uncharacterized protein3.5e-1049.38Show/hide
Query:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP
        MGR +FL FL++S ++ALCFS+GFGR  ++VE  +    S VL+ +E+  K R  M   MDY+DPEPN N + GY+  PPP
Subjt:  MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCGCTCTTATTTTCTCTCGTTTCTTCTTCTTTCTATCGTTATCGCTCTCTGTTTCTCTAATGGATTTGGAAGGAATTTGAGGATGGTGGAGGCTGTTGATTCACA
TCATGGCTCTAGAGTTCTACTAGAGCAGGAAAGTGGAAGAAAATGGAGGATGATGATGATGGAGACAATGGATTATTCAGATCCAGAACCAAATACCAACGTAAAAGGTG
GCTATGTTTCTCCACCCCCTCCTCCAAATCGTGGATGA
mRNA sequenceShow/hide mRNA sequence
AGAAAAAAAAAACTCAAACTTCTTCTAGTAATTACTCGTCACTTACTCATTCATTCATAAATCTGAAAACAACCCAGTTCTCAAATCCTCTTCACAATAATGGGTCGCTC
TTATTTTCTCTCGTTTCTTCTTCTTTCTATCGTTATCGCTCTCTGTTTCTCTAATGGATTTGGAAGGAATTTGAGGATGGTGGAGGCTGTTGATTCACATCATGGCTCTA
GAGTTCTACTAGAGCAGGAAAGTGGAAGAAAATGGAGGATGATGATGATGGAGACAATGGATTATTCAGATCCAGAACCAAATACCAACGTAAAAGGTGGCTATGTTTCT
CCACCCCCTCCTCCAAATCGTGGATGAATTTTTATTCCATTCTCAAGAAATCAACAAGGGCTTTCTTTAGTTTTCCTTTTTTTTTTTTTGGTGGTGTGTGTGGGAATGTT
ATTTGTTCATAGTATTTGTTTGGGACAGGTAGGGGAAAGAAGCAGTTCATTGATGTGAAATTACCTATTTTATTTCGTTTTTGTAAAGAGATTTGTTTGTGGTTTGGATG
TGGATCAATAAATCGTGTGCATTTTATTAGAGTT
Protein sequenceShow/hide protein sequence
MGRSYFLSFLLLSIVIALCFSNGFGRNLRMVEAVDSHHGSRVLLEQESGRKWRMMMMETMDYSDPEPNTNVKGGYVSPPPPPNRG