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Clc10G14760 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G14760
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionVesicle transport v-SNARE family protein
Genome locationClcChr10:28436095..28436878
RNA-Seq ExpressionClc10G14760
SyntenyClc10G14760
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006906 - vesicle fusion (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0012507 - ER to Golgi transport vesicle membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031201 - SNARE complex (cellular component)
GO:0031902 - late endosome membrane (cellular component)
GO:0000149 - SNARE binding (molecular function)
GO:0005484 - SNAP receptor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580954.1 Dihydroorotase, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]7.2e-3889.69Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        M+TTERLG  SDRIKDS+RTMLETEDLGVSILEDLHSQRQ LLRAHDTLHGVDDN+GRSKRILTNM+RRMNKNKWTI CI +VLVIAIIVILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

XP_004136695.1 vesicle transport v-SNARE 13 [Cucumis sativus]5.0e-3992.78Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        MTTTERLGNMS RIKDS+R MLETEDLGVSILEDLHSQRQSLL AHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTI CI++VLVIAIIVILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

XP_008443391.1 PREDICTED: vesicle transport v-SNARE 13-like [Cucumis melo]1.3e-3992.78Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        MTTTERLGNMSDRIKDS+RTMLETEDLGVSILEDLHSQRQSLL AHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTI C+++VLVIAII ILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

XP_022144558.1 vesicle transport v-SNARE 11-like [Momordica charantia]1.9e-3889.69Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        MTTTERLG  SDRIKDSRRTMLETEDLGVSIL+DLHSQRQSLL AHDTLHGVDDN+G+SKRILTN++RRMNKNKWTI CIV+VLVIAIIVILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

XP_038905553.1 vesicle transport v-SNARE 13-like isoform X1 [Benincasa hispida]5.0e-3990.72Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        MTTTERLGNMS+RIKDS+RTMLETEDLGVSILEDLHSQRQSLL AHDTLHGVDDN+GRSKRILTNMTRRMNKNKWTI CIV+ LV AII+ILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

TrEMBL top hitse value%identityAlignment
A0A0A0LC29 V-SNARE domain-containing protein2.4e-3992.78Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        MTTTERLGNMS RIKDS+R MLETEDLGVSILEDLHSQRQSLL AHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTI CI++VLVIAIIVILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

A0A1S3B8M5 vesicle transport v-SNARE 13-like6.4e-4092.78Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        MTTTERLGNMSDRIKDS+RTMLETEDLGVSILEDLHSQRQSLL AHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTI C+++VLVIAII ILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

A0A6J1CTL4 vesicle transport v-SNARE 11-like9.2e-3989.69Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        MTTTERLG  SDRIKDSRRTMLETEDLGVSIL+DLHSQRQSLL AHDTLHGVDDN+G+SKRILTN++RRMNKNKWTI CIV+VLVIAIIVILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

A0A6J1F9S4 vesicle transport v-SNARE 13-like3.0e-3788.66Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        M+TTERLG  SDRIKDS+RTMLETEDLGVSILEDLHSQRQ LLRAHDTLHGVDDN+GRSKRILTNM+RRMNK KWTI CI +VLVIAIIVILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

A0A6J1J747 vesicle transport v-SNARE 13-like7.8e-3888.66Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        M+TTERLG  SDRIKDS+RTMLETEDLGVSILEDLHSQRQ LLRAHDTLHGVDDN+GRSKRILTNM+RRMNKNKWTI CI ++LVIAIIVILYFKLK
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

SwissProt top hitse value%identityAlignment
P78768 Vesicle transport v-SNARE protein vti11.5e-0939.36Show/hide
Query:  TERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        T RL   S R+ +S+R   ETE +G SIL DLH QR  L  + + L     ++ RS R L  M RR+  N++    I+++LVI I+++LY K +
Subjt:  TERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

Q04338 t-SNARE VTI18.6e-1040.66Show/hide
Query:  LGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        L    DR+KD+ R   ETE +G  I+ DL SQR++L  A  TL   D  V +S + L  MTRR+  NK+    I++VL++ I+++L+ K K
Subjt:  LGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK

Q9LVP9 Vesicle transport v-SNARE 132.9e-3477.08Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL
        M +T+ LG  +DRIKDSRRT+LETE+LGVSIL+DLH QRQSLLRAH+TLHGVDDNVG+SK+ILT MTRRMN+NKWTI  I++VLV+AII ILYFKL
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL

Q9SEL5 Vesicle transport v-SNARE 128.9e-2356.38Show/hide
Query:  TTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL
        + ERL   SDRI++SRR MLETE++G+SI++DL  QRQ+LL AH+ LHGVDD + +SK++LT M+RRM +NKW I  ++  LV+AII+I+ +KL
Subjt:  TTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL

Q9SEL6 Vesicle transport v-SNARE 113.8e-3473.96Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL
        M +TERLG  +DR+KDSRRTM+ETE++GVSIL+DLH QRQSLLRAH+TLHGVDDN+G+SK+ILT+MTRRMNKNKWTI  I+  L+ AI +ILYFKL
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL

Arabidopsis top hitse value%identityAlignment
AT1G26670.1 Vesicle transport v-SNARE family protein6.3e-2456.38Show/hide
Query:  TTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL
        + ERL   SDRI++SRR MLETE++G+SI++DL  QRQ+LL AH+ LHGVDD + +SK++LT M+RRM +NKW I  ++  LV+AII+I+ +KL
Subjt:  TTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL

AT3G29100.1 vesicle transport V-snare 132.1e-3577.08Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL
        M +T+ LG  +DRIKDSRRT+LETE+LGVSIL+DLH QRQSLLRAH+TLHGVDDNVG+SK+ILT MTRRMN+NKWTI  I++VLV+AII ILYFKL
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL

AT3G29100.2 vesicle transport V-snare 132.1e-3577.08Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL
        M +T+ LG  +DRIKDSRRT+LETE+LGVSIL+DLH QRQSLLRAH+TLHGVDDNVG+SK+ILT MTRRMN+NKWTI  I++VLV+AII ILYFKL
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL

AT5G39510.1 Vesicle transport v-SNARE family protein2.7e-3573.96Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL
        M +TERLG  +DR+KDSRRTM+ETE++GVSIL+DLH QRQSLLRAH+TLHGVDDN+G+SK+ILT+MTRRMNKNKWTI  I+  L+ AI +ILYFKL
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKL

AT5G39630.1 Vesicle transport v-SNARE family protein2.4e-0735.05Show/hide
Query:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK
        M +TE L    + IKDS+R +LETE++G+SILE+L  Q++SL  +   LH +DD V  S+ I+ ++             I     +   +I+YF  K
Subjt:  MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
atgaccacaacagagagattaggcaatatgagtgacaggattaaggatagtcgaagaactatgcttgaaactgaagaccttggtgtgtcaatcttagaagacttg
cattcacagagacaatcgcttttgcgtgcccatgacacgcttcatggtgtggatgataacgttggcagaagcaaaagaattttaaccaatatgacaaggaggatg
aacaaaaataagtggacaatttgctgcatcgttagtgtccttgttattgctatcattgtgatattatacttcaaacttaaatag
mRNA sequenceShow/hide mRNA sequence
atgaccacaacagagagattaggcaatatgagtgacaggattaaggatagtcgaagaactatgcttgaaactgaagaccttggtgtgtcaatcttagaagacttg
cattcacagagacaatcgcttttgcgtgcccatgacacgcttcatggtgtggatgataacgttggcagaagcaaaagaattttaaccaatatgacaaggaggatg
aacaaaaataagtggacaatttgctgcatcgttagtgtccttgttattgctatcattgtgatattatacttcaaacttaaataggtaaagacattcctggtacaa
agttgactttcatttttttttctttttctt
Protein sequenceShow/hide protein sequence
MTTTERLGNMSDRIKDSRRTMLETEDLGVSILEDLHSQRQSLLRAHDTLHGVDDNVGRSKRILTNMTRRMNKNKWTICCIVSVLVIAIIVILYFKLK