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Clc10G15550 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G15550
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:29234557..29235100
RNA-Seq ExpressionClc10G15550
SyntenyClc10G15550
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053873.1 hypothetical protein E6C27_scaffold135G002660 [Cucumis melo var. makuwa]3.2e-1456.84Show/hide
Query:  MAGMQYNFFPTDFYYPRPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ
        MAGM  NFFPTDFYYPR    + P+  QI+A+PL         KTVEDDRE +      +   +L  SS+AI+ K+VGASTSMAFLPPPSYILKQ
Subjt:  MAGMQYNFFPTDFYYPRPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ

KAG6580888.1 hypothetical protein SDJN03_20890, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1659.38Show/hide
Query:  MAGMQYNFFPTDFYYPR--PPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILK
        MAGMQYNFFPTDFYYPR  PP P PPNSV++           P R+TVED++  + S+D+PKASP    +SMA++  VVGAS S AFLPPPS+ILK
Subjt:  MAGMQYNFFPTDFYYPR--PPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILK

WP_217833416.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]8.1e-34100Show/hide
Query:  RPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ
        RPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ
Subjt:  RPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ

TrEMBL top hitse value%identityAlignment
A0A5A7UD60 Uncharacterized protein1.5e-1456.84Show/hide
Query:  MAGMQYNFFPTDFYYPRPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ
        MAGM  NFFPTDFYYPR    + P+  QI+A+PL         KTVEDDRE +      +   +L  SS+AI+ K+VGASTSMAFLPPPSYILKQ
Subjt:  MAGMQYNFFPTDFYYPRPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAATGCAATACAACTTCTTCCCTACAGACTTCTACTACCCTCGTCCACCGCTGCCGTCGCCGCCTAATTCCGTTCAAATCTCCGCTGAGCCTCTGCCATCTAC
GGTTGTTCCTCCGCCGAGAAAAACAGTTGAAGATGATCGAGAAGCCGATTGGTCACTCGATAAACCGAAAGCATCGCCGTCATTATTGTCGTCGTCCATGGCCATCGACA
CGAAGGTGGTTGGAGCTTCAACTTCCATGGCGTTTCTTCCTCCTCCCTCTTATATCCTCAAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATCTCTCTCTCTTTTACGTATACAGTACTGAATCCAGCAGCCATGGCGGGAATGCAATACAACTTCTTCCCTACAGACTTCTACTACCCTCGTCCACCGCTGCCGTCGCC
GCCTAATTCCGTTCAAATCTCCGCTGAGCCTCTGCCATCTACGGTTGTTCCTCCGCCGAGAAAAACAGTTGAAGATGATCGAGAAGCCGATTGGTCACTCGATAAACCGA
AAGCATCGCCGTCATTATTGTCGTCGTCCATGGCCATCGACACGAAGGTGGTTGGAGCTTCAACTTCCATGGCGTTTCTTCCTCCTCCCTCTTATATCCTCAAACAATGA
AACTCTCACCATTTTTTTCCTTTTCCCTTAGATTTGAATAAAGTATTGTCATATTGGAGATTTGCTTTTCATTTGTACTGAGTGAATTATATATAAACATAAGTTTCCAA
ATGAAAGTCATACGTGACATAAATTTCTTACGGCAGTTTGTTAATTATTTATTTATTTTTTTTTAATTTTTATTGGGTCTATAATTCTATGAGCAATATTTAGA
Protein sequenceShow/hide protein sequence
MAGMQYNFFPTDFYYPRPPLPSPPNSVQISAEPLPSTVVPPPRKTVEDDREADWSLDKPKASPSLLSSSMAIDTKVVGASTSMAFLPPPSYILKQ