CuGenDBv2

Gene ID	Clc10G16285
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	pleiotropic drug resistance 2
Genome location	ClcChr10:30069419..30069802
RNA-Seq Expression	Clc10G16285
Synteny	Clc10G16285
Gene Ontology terms	GO:0055085 - transmembrane transport (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009536 - plastid (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0005524 - ATP binding (molecular function) GO:0140359 - ABC-type transmembrane transporter activity (molecular function)
InterPro domains	IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0053948.1 pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo var. makuwa]

1.7e-32

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP V+GLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

XP_008443150.1 PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo]

1.7e-32

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP V+GLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

XP_008443151.1 PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo]

1.7e-32

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP V+GLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

XP_011652141.2 pleiotropic drug resistance protein 3 [Cucumis sativus]

1.7e-32

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP VSGLSTEQRK+LTI VELV+NPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

XP_031741892.1 pleiotropic drug resistance protein 3 isoform X2 [Cucumis sativus]

2.2e-32

76.64

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        LVGIP VSGLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
        KVIEYFE
Subjt:  KVIEYFE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPP7 ABC transporter domain-containing protein

1.1e-32

76.64

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        LVGIP VSGLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
        KVIEYFE
Subjt:  KVIEYFE

A0A0A0LBH1 Uncharacterized protein

8.1e-33

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP VSGLSTEQRK+LTI VELV+NPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

A0A1S3B6X0 pleiotropic drug resistance protein 3-like isoform X1

8.1e-33

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP V+GLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

A0A1S3B7C4 pleiotropic drug resistance protein 3-like isoform X2

8.1e-33

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP V+GLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

A0A5A7UFY6 Pleiotropic drug resistance protein 3-like isoform X1

8.1e-33

75.93

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T
        MLVGIP V+GLSTEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKNVVDTG+T+VCTIHQPSIDIFESFD LIL      +++       +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----T

Query:  KKVIEYFE
        +KVIEYFE
Subjt:  KKVIEYFE

SwissProt top hits

e value

%identity

Alignment

Q5W274 Pleiotropic drug resistance protein 3

2.7e-33

72.22

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Query:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL-----DDLLW---TAQT
        MLVG+P VSGLSTEQRK+LTI VELV+NPSII MDEPTTGLDAR+AAIVMRAVKNV DTG+T+VCTIHQPSIDIFE+FD LIL       + W      +
Subjt:  MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL-----DDLLW---TAQT

Query:  KKVIEYFE
         K+IEYFE
Subjt:  KKVIEYFE

Q5Z9S8 ABC transporter G family member 42

1.3e-32

68.22

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----TK
        LVG+P ++GLSTEQRK+LTI VELV+NPSII MDEPT+GLDARAAAIVMR V+N VDTG+TVVCTIHQPSIDIFE+FD L+L      ++++ Q    ++
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTAQ----TK

Query:  KVIEYFE
        K+IEYFE
Subjt:  KVIEYFE

Q7PC83 ABC transporter G family member 41

7.8e-33

71.03

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        +VG+P +SGLSTEQRK+LTI VELVSNPSII +DEPTTGLDARAAAIVMRAVKNV +TG+TVVCTIHQPSIDIFE+FD LIL      L++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
        KVI+YFE
Subjt:  KVIEYFE

Q8GZ52 ABC transporter G family member 30

1.7e-32

71.03

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        +VG+P +SGLS EQRK+LTI VELV+NPSII MDEPTTGLDARAAAIVMRAVKNV +TG+TVVCTIHQPSIDIFE+FD LIL      L++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
        KVIEYFE
Subjt:  KVIEYFE

Q9LFH0 ABC transporter G family member 37

6.0e-33

70.09

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        LVG+  VSGLSTEQRK+LTI VELV+NPSII MDEPTTGLDARAAAIVMRAVKNV DTG+T+VCTIHQPSIDIFE+FD L+L      +++T      ++
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
         +IEYFE
Subjt:  KVIEYFE

Arabidopsis top hits

e value

%identity

Alignment

AT3G53480.1 pleiotropic drug resistance 9

4.2e-34

70.09

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        LVG+  VSGLSTEQRK+LTI VELV+NPSII MDEPTTGLDARAAAIVMRAVKNV DTG+T+VCTIHQPSIDIFE+FD L+L      +++T      ++
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
         +IEYFE
Subjt:  KVIEYFE

AT4G15215.1 pleiotropic drug resistance 13

5.5e-34

71.03

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        +VG+P +SGLSTEQRK+LTI VELVSNPSII +DEPTTGLDARAAAIVMRAVKNV +TG+TVVCTIHQPSIDIFE+FD LIL      L++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
        KVI+YFE
Subjt:  KVIEYFE

AT4G15230.1 pleiotropic drug resistance 2

1.2e-33

71.03

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        +VG+P +SGLS EQRK+LTI VELV+NPSII MDEPTTGLDARAAAIVMRAVKNV +TG+TVVCTIHQPSIDIFE+FD LIL      L++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYFE
        KVIEYFE
Subjt:  KVIEYFE

AT4G15233.1 ABC-2 and Plant PDR ABC-type transporter family protein

1.2e-33

70.75

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        +VGIP +SGL+TEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKN+ +TG+TVVCTIHQPSIDIFE+FD LIL      +++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYF
        KVIEYF
Subjt:  KVIEYF

AT4G15233.2 ABC-2 and Plant PDR ABC-type transporter family protein

1.2e-33

70.75

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Query:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK
        +VGIP +SGL+TEQRK+LTI VELVSNPSII MDEPTTGLDARAAAIVMRAVKN+ +TG+TVVCTIHQPSIDIFE+FD LIL      +++       + 
Subjt:  LVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLIL----DDLLWTA----QTK

Query:  KVIEYF
        KVIEYF
Subjt:  KVIEYF

Sequences

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CDS sequence

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ATGTTGGTTGGCATACCCAATGTTAGTGGTCTATCGACCGAGCAACGTAAACAGTTAACCATTGTTGTAGAGCTTGTTTCCAATCCTTCTATCATCTTAATGGATGAGCC
TACCACTGGTTTGGATGCAAGAGCAGCTGCCATTGTCATGCGAGCGGTTAAGAATGTGGTTGATACTGGAAAAACAGTAGTTTGTACCATCCACCAGCCAAGTATCGACA
TCTTTGAATCGTTTGATGTGTTGATTCTTGATGATCTACTATGGACTGCTCAGACGAAAAAGGTTATAGAATATTTTGAGGTCACTCTGCTTTAA

mRNA sequence

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Protein sequence

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MLVGIPNVSGLSTEQRKQLTIVVELVSNPSIILMDEPTTGLDARAAAIVMRAVKNVVDTGKTVVCTIHQPSIDIFESFDVLILDDLLWTAQTKKVIEYFEVTLL

Clc10G16285 (gene) of Watermelon (cordophanus) v2 genome