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Clc10G16290 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G16290
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSerine-type D-Ala-D-Ala carboxypeptidase
Genome locationClcChr10:30069582..30072764
RNA-Seq ExpressionClc10G16290
SyntenyClc10G16290
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER36588.1 solute carrier family 2 [Striga asiatica]2.1e-0963.49Show/hide
Query:  MVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK
        MV TTV PVST FLT  +T+AAALAS P VGSS+ +IEGL T+ST +V+   CSV+ PLT GK
Subjt:  MVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK

KAF7817222.1 Coatomer subunit beta-1 [Senna tora]2.4e-1363.77Show/hide
Query:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG
        +SILGWW+VQTTV PVST FLT  +T+AAALAS+P VGSS+ +I+G  TSST +V+ LRCSV+ P++ G
Subjt:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG

PKA53769.1 hypothetical protein AXF42_Ash020690 [Apostasia shenzhenica]5.5e-1364.18Show/hide
Query:  ILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG
        +LGWW+V TTV PV T FLT  +T+AAALAS P VGSS+ +IEGL TSST +VN LRCS+D+P   G
Subjt:  ILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG

PKU67855.1 hypothetical protein MA16_Dca019381 [Dendrobium catenatum]2.1e-0961.9Show/hide
Query:  MVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK
        MV TTV PV T FLT R+T+AAALAS+P VGSS+KM++G  T+ST +V+   CSVDRP T G+
Subjt:  MVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK

PKU77890.1 hypothetical protein MA16_Dca005722 [Dendrobium catenatum]1.9e-1368.66Show/hide
Query:  ILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG
        +LGW +V TTV PVST FLT  +TMAAALAS P VGSSI +IEGL TSST +VN  RCSVD+P T G
Subjt:  ILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG

TrEMBL top hitse value%identityAlignment
A0A0A9IW72 PDR85.3e-1466.67Show/hide
Query:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG
        MS+LGWW+VQTTV PVST F T  MT+AAALAS+P VGSS+KMI+GL TSST +VN   CSV+ P+  G
Subjt:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG

A0A0A9J2I1 Similar to PDR8/PEN3 (PLEIOTROPIC DRUG RESISTANCE8)2.4e-1465.71Show/hide
Query:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK
        MS+LGWW+VQTTV PVST F T  MT+AAALAS+P VGSS+KMI+GL TSST +VN   CSV+ P+  G+
Subjt:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK

A0A0A9JC22 Similar to PDR8/PEN3 (PLEIOTROPIC DRUG RESISTANCE8)1.4e-1467.14Show/hide
Query:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK
        MS+LGWW+VQTTV PVST F T  MT+AAALAS+P VGSS+KMIEGL TSST +V+   CSVD P+  G+
Subjt:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGK

A0A0A9NJV1 Uncharacterized protein7.0e-1471.01Show/hide
Query:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG
        +S+LGW MVQTTV PVST FL A MTMAAA AS P VGSS+KMIEGL TSST +V+   CSVD PLT G
Subjt:  MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG

A0A2I0WQF4 Uncharacterized protein9.1e-1468.66Show/hide
Query:  ILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG
        +LGW +V TTV PVST FLT  +TMAAALAS P VGSSI +IEGL TSST +VN  RCSVD+P T G
Subjt:  ILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATACTTGGCTGGTGGATGGTACAAACTACTGTTTTTCCAGTATCAACCACATTCTTAACCGCTCGCATGACAATGGCAGCTGCTCTTGCATCCAAACCA
GTGGTAGGCTCATCCATTAAGATGATAGAAGGATTGGAAACAAGCTCTACAACAATGGTTAACTGTTTACGTTGCTCGGTCGATAGACCACTAACATTGGGGAAG
TTTGATTTTGAGGAAACAAAGACAAATGGAGTAGTTGATGTTGATGAATTGTCTGCTTGGCCGCTGGGATTTTCTCATATGATTCCAAGCCCAACGGTGAACGTA
AAATCGAATCAATTGGTCCTAGAATATAGAAGAACTCTGGTCTGTTCCTATTTCGATTTCACTGGAGTTCTTGAGAATGATCTTTTTGGTTCTATACTTGCTCTT
GCTAACATTCCTCTAGGGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGATACTTGGCTGGTGGATGGTACAAACTACTGTTTTTCCAGTATCAACCACATTCTTAACCGCTCGCATGACAATGGCAGCTGCTCTTGCATCCAAACCA
GTGGTAGGCTCATCCATTAAGATGATAGAAGGATTGGAAACAAGCTCTACAACAATGGTTAACTGTTTACGTTGCTCGGTCGATAGACCACTAACATTGGGGAAG
TTTGATTTTGAGGAAACAAAGACAAATGGAGTAGTTGATGTTGATGAATTGTCTGCTTGGCCGCTGGGATTTTCTCATATGATTCCAAGCCCAACGGTGAACGTA
AAATCGAATCAATTGGTCCTAGAATATAGAAGAACTCTGGTCTGTTCCTATTTCGATTTCACTGGAGTTCTTGAGAATGATCTTTTTGGTTCTATACTTGCTCTT
GCTAACATTCCTCTAGGGTCATAA
Protein sequenceShow/hide protein sequence
MSILGWWMVQTTVFPVSTTFLTARMTMAAALASKPVVGSSIKMIEGLETSSTTMVNCLRCSVDRPLTLGKFDFEETKTNGVVDVDELSAWPLGFSHMIPSPTVNV
KSNQLVLEYRRTLVCSYFDFTGVLENDLFGSILALANIPLGS