; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G16560 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G16560
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:30445456..30445794
RNA-Seq ExpressionClc10G16560
SyntenyClc10G16560
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN59339.1 hypothetical protein Csa_002297 [Cucumis sativus]2.5e-1853.85Show/hide
Query:  EKNANKGNVSNDGGDIHSPAVSLLSEE--ISRGENEVFLKMKKRKRSESEEESPR----FRKETKKIEKEENKSEME-------WVPGMNIPGPIPNLFA
        +K+AN GN+ ND GD++SP +S LSEE  +S GEN+V  KM+KR +SE ++ESPR      +  KK EKEE K  +E       W+PG+ IPGPIP++  
Subjt:  EKNANKGNVSNDGGDIHSPAVSLLSEE--ISRGENEVFLKMKKRKRSESEEESPR----FRKETKKIEKEENKSEME-------WVPGMNIPGPIPNLFA

Query:  IIQEQFNLHTILDDPRL
        IIQ+QFNLHTILDDP L
Subjt:  IIQEQFNLHTILDDPRL
TYK25435.1 hypothetical protein E5676_scaffold352G005790 [Cucumis melo var. makuwa]6.2e-1751.64Show/hide
Query:  MNENSSREKNANKGNVSNDGGDIHSPAVSLLSEE-ISRGENEVFLKMKKRKRSESEEESPR---FRKETKKIEKEENKSEME-------WVPGMNIPGPI
        + ++ +++ + NKG+VSND  D+ SP +S LSE  IS GEN+V  KM+KR  SE ++ESPR     +  KK EKEE K  +E       WVPG+ IPGPI
Subjt:  MNENSSREKNANKGNVSNDGGDIHSPAVSLLSEE-ISRGENEVFLKMKKRKRSESEEESPR---FRKETKKIEKEENKSEME-------WVPGMNIPGPI

Query:  PNLFAIIQEQFNLHTILDDPRL
        P+L  II +QFNLHTILDDP L
Subjt:  PNLFAIIQEQFNLHTILDDPRL
TrEMBL top hitse value%identityAlignment
A0A0A0LEJ7 Uncharacterized protein1.2e-1853.85Show/hide
Query:  EKNANKGNVSNDGGDIHSPAVSLLSEE--ISRGENEVFLKMKKRKRSESEEESPR----FRKETKKIEKEENKSEME-------WVPGMNIPGPIPNLFA
        +K+AN GN+ ND GD++SP +S LSEE  +S GEN+V  KM+KR +SE ++ESPR      +  KK EKEE K  +E       W+PG+ IPGPIP++  
Subjt:  EKNANKGNVSNDGGDIHSPAVSLLSEE--ISRGENEVFLKMKKRKRSESEEESPR----FRKETKKIEKEENKSEME-------WVPGMNIPGPIPNLFA

Query:  IIQEQFNLHTILDDPRL
        IIQ+QFNLHTILDDP L
Subjt:  IIQEQFNLHTILDDPRL
A0A5D3DPL9 Uncharacterized protein3.0e-1751.64Show/hide
Query:  MNENSSREKNANKGNVSNDGGDIHSPAVSLLSEE-ISRGENEVFLKMKKRKRSESEEESPR---FRKETKKIEKEENKSEME-------WVPGMNIPGPI
        + ++ +++ + NKG+VSND  D+ SP +S LSE  IS GEN+V  KM+KR  SE ++ESPR     +  KK EKEE K  +E       WVPG+ IPGPI
Subjt:  MNENSSREKNANKGNVSNDGGDIHSPAVSLLSEE-ISRGENEVFLKMKKRKRSESEEESPR---FRKETKKIEKEENKSEME-------WVPGMNIPGPI

Query:  PNLFAIIQEQFNLHTILDDPRL
        P+L  II +QFNLHTILDDP L
Subjt:  PNLFAIIQEQFNLHTILDDPRL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAGAACAGTAGTAGAGAGAAGAATGCAAACAAAGGCAATGTCAGCAACGACGGTGGCGACATACATTCTCCGGCGGTGTCGTTGCTGTCGGAGGAGATATCGAG
AGGGGAAAATGAAGTTTTTCTGAAGATGAAAAAGAGAAAGAGATCAGAGAGTGAAGAAGAAAGTCCAAGATTCAGAAAAGAAACCAAAAAGATTGAAAAAGAAGAAAATA
AATCAGAAATGGAGTGGGTCCCAGGGATGAACATTCCAGGACCAATACCTAATCTTTTTGCCATTATTCAAGAGCAATTCAATCTTCATACTATCTTGGATGATCCACGT
CTTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAGAACAGTAGTAGAGAGAAGAATGCAAACAAAGGCAATGTCAGCAACGACGGTGGCGACATACATTCTCCGGCGGTGTCGTTGCTGTCGGAGGAGATATCGAG
AGGGGAAAATGAAGTTTTTCTGAAGATGAAAAAGAGAAAGAGATCAGAGAGTGAAGAAGAAAGTCCAAGATTCAGAAAAGAAACCAAAAAGATTGAAAAAGAAGAAAATA
AATCAGAAATGGAGTGGGTCCCAGGGATGAACATTCCAGGACCAATACCTAATCTTTTTGCCATTATTCAAGAGCAATTCAATCTTCATACTATCTTGGATGATCCACGT
CTTCATTGA
Protein sequenceShow/hide protein sequence
MNENSSREKNANKGNVSNDGGDIHSPAVSLLSEEISRGENEVFLKMKKRKRSESEEESPRFRKETKKIEKEENKSEMEWVPGMNIPGPIPNLFAIIQEQFNLHTILDDPR
LH