; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G17890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G17890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein YLS9
Genome locationClcChr10:31789716..31790471
RNA-Seq ExpressionClc10G17890
SyntenyClc10G17890
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043818.1 protein YLS9 [Cucumis melo var. makuwa]5.9e-11687.6Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        MA+TVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN
        RERRRKV HDNE++YY SSATKT+TKT+Q  KKNPPENVMLLRRN GIE ELLSGF+SPVMDRYEYEERIRKLQ E+EKYL+S+++NNLTM GGGDGGRN
Subjt:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN

Query:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKE
         S RSET +CRDC+SAKE G+AAGFHCCANDAVTAGFRS AGPIARPV++
Subjt:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKE

KAG6580743.1 hypothetical protein SDJN03_20745, partial [Cucurbita argyrosperma subsp. sororia]5.9e-10882.54Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        M ET  GVSFPIVFHDGE+D  IGSVIVSSST+FKNFQS LSKMIGISSHQFTVYLAEYKISLD STKIRRRIPITGKVNF AIS EKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN
        RERRRKV  +NEDEYYL SATKTK KT+Q +KKNPPENVMLLRRN GIE ++LSGFISP MDRY+YEERIRKLQ E+E Y  S+ L NLT GG GDGG N
Subjt:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN

Query:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD
        GS +S+TT CRDCLSAKETG A GFHCCANDAVTAGFRSHAGPIARP+KES+
Subjt:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

KAG6596614.1 hypothetical protein SDJN03_09794, partial [Cucurbita argyrosperma subsp. sororia]3.3e-9575.4Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        M ET   VSFP+VFHDGERD ++GSV VSSSTEFKNFQS+LSKMIGISSHQFTVYLAEYKIS+DS+ KIRRRIPITGKVNF AI+ EKN FFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHDNEDEYYLSSATKTKTKTSQS-KKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN
        RERRRK+   NEDEY +SSATKT TKT+ S KKNP ENVMLL+RNTGIE ELL GFISP  +R+EY++R  KLQ E EKYL++I   NL +GGG  G +N
Subjt:  RERRRKVAHDNEDEYYLSSATKTKTKTSQS-KKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN

Query:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD
        G+ R +T VC DCL+AKETG+AAGFHCCA+DAVT GFRSHAGPIARPVKESD
Subjt:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

KAG7017495.1 hypothetical protein SDJN02_19360, partial [Cucurbita argyrosperma subsp. argyrosperma]6.5e-10781.75Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        M ET  GVSFPIVFHDGE+D  IGSVIVSSST+FKNFQS LSKMIGISSHQFTVYLAEYKISLD STKIRRRIPITGKVNF AIS EKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN
        RERRRKV  +NEDEYYL SATKTK KT+Q +KKNPPENVMLLRRN GIE ++LSGFISP MDRY+YEERIRKLQ E+E Y  S+ + NLT GG GDG  N
Subjt:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN

Query:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD
        GS +S+TT CRDCLSAKETG A GFHCCANDAVTAGFRSHAGPIARP+KES+
Subjt:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

XP_031739121.1 uncharacterized protein LOC116402855 [Cucumis sativus]2.6e-11688.1Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHDNEDEYYLSSATKTKTKTS-QSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN
        RERRRKV HDNE++YY SSATKT+TKT+   KKNPPENVMLLRRN GIE ELL+GFISPVMDRYEYE+RIRKLQ EKEKYLMSI+++NL MG GGDGGRN
Subjt:  RERRRKVAHDNEDEYYLSSATKTKTKTS-QSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN

Query:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD
         S RSE  +C DCLSAKE G+AAGFHCCANDAVTAGFRSHAGPIARPVKES+
Subjt:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

TrEMBL top hitse value%identityAlignment
A0A0A0LER6 Uncharacterized protein1.3e-11688.1Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHDNEDEYYLSSATKTKTKTS-QSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN
        RERRRKV HDNE++YY SSATKT+TKT+   KKNPPENVMLLRRN GIE ELL+GFISPVMDRYEYE+RIRKLQ EKEKYLMSI+++NL MG GGDGGRN
Subjt:  RERRRKVAHDNEDEYYLSSATKTKTKTS-QSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN

Query:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD
         S RSE  +C DCLSAKE G+AAGFHCCANDAVTAGFRSHAGPIARPVKES+
Subjt:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

A0A5A7TLT1 Protein YLS92.8e-11687.6Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        MA+TVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQS LSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNF AISGEKNSFFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN
        RERRRKV HDNE++YY SSATKT+TKT+Q  KKNPPENVMLLRRN GIE ELLSGF+SPVMDRYEYEERIRKLQ E+EKYL+S+++NNLTM GGGDGGRN
Subjt:  RERRRKVAHDNEDEYYLSSATKTKTKTSQ-SKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRN

Query:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKE
         S RSET +CRDC+SAKE G+AAGFHCCANDAVTAGFRS AGPIARPV++
Subjt:  GSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKE

A0A5N6RSG5 Uncharacterized protein1.9e-5149.03Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        M +   GVS P+VF DGER+T+IG+V+V  S EFK FQS++S  IGIS  QF+ +LA          + +R+IPIT K NF+A+S  ++ FFLVVLKRS+
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHD-NEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEK---ELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDG
        RERRR+   +  EDEYY S  +  +    ++ K  PENVMLLRRN GIE    +  SGF+S  MDR  YE R+++L++E+++YLMS+ L+ L +G GG G
Subjt:  RERRRKVAHD-NEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEK---ELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDG

Query:  --GRNGSARSETTVCRDCLS--AKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD
             G  ++    C +CL   AK++G   GFH C  DAVT GFRS AGPIARPVK S+
Subjt:  --GRNGSARSETTVCRDCLS--AKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

A0A6A1UKZ8 Uncharacterized protein2.5e-5651.57Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        M E   GVSFP+VF DGER++NIG+V+VS S +FK+FQS++S+ IGIS HQF+VYLA     +   ++  R+IPITGK NF  I  +K+ FFLVVLKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RER-RRKVAHDNEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGG--
        RER RR      ED+YY SS         Q     PENVMLLRRN  I  +   GF SP++DR  YE+R+R+LQ E+E+YL ++ L  L +G   +GG  
Subjt:  RER-RRKVAHDNEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGG--

Query:  RNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD
         N   R+    C +C+ AK  G   GFH C  DAVT+GFRS AGPIARPVK S+
Subjt:  RNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKESD

A0A6P9E6Z6 uncharacterized protein LOC1183479051.1e-5651.16Show/hide
Query:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR
        M    +GVSFP+VF DGER+T+IG V+V  S  FKNFQS+LS+ IGIS HQF+VYLA     +   ++  R+IPITGKVNF+AIS EK+ FFLV+LKRSR
Subjt:  MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSR

Query:  RERRRKVAHD-NEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTM-----GGGG
        RER+R+   +  E+EYY SS +  + +     K  P NVMLLRR+ G E +   G++SP++DR  YE+R+++LQ E+E+YL+++ L+ L++     GG G
Subjt:  RERRRKVAHD-NEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTM-----GGGG

Query:  DGG--RNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKES
        + G  RNG    E   C +C+ AK+ G   GFH C  D VT GFRS AGPIARPVK S
Subjt:  DGG--RNGSARSETTVCRDCLSAKETGMAAGFHCCANDAVTAGFRSHAGPIARPVKES

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGACCGTCGAGGGCGTTTCGTTCCCGATCGTTTTCCACGACGGCGAACGAGATACCAACATCGGTTCCGTCATCGTTTCTTCTTCGACGGAATTCAAGAATTT
CCAGTCGCTTTTGAGCAAGATGATTGGAATCTCATCGCACCAGTTCACGGTTTACCTCGCGGAGTATAAGATCTCTCTGGATTCCTCGACGAAGATTCGGCGGAGAATTC
CAATCACTGGGAAGGTCAACTTCAGCGCAATCTCCGGCGAGAAGAACAGTTTTTTTCTTGTGGTTTTGAAACGATCAAGACGCGAGAGGAGGCGAAAGGTCGCCCACGAC
AACGAAGACGAATATTACCTCTCGTCGGCGACGAAGACGAAAACAAAGACGAGTCAATCAAAGAAGAATCCACCGGAGAATGTGATGCTGTTGAGACGAAACACCGGCAT
CGAAAAGGAATTGCTCTCCGGCTTCATCTCGCCGGTGATGGATCGATACGAATACGAAGAGCGAATTCGGAAGCTGCAGTCGGAGAAGGAGAAGTACTTAATGAGCATAC
GGCTAAACAATCTGACGATGGGAGGAGGCGGAGATGGCGGCCGGAACGGTTCTGCGAGATCGGAAACGACAGTCTGCCGTGATTGCCTGAGTGCGAAAGAAACCGGGATG
GCGGCCGGATTTCACTGCTGCGCCAACGACGCCGTGACGGCCGGATTCCGATCACACGCGGGTCCGATAGCCCGACCCGTAAAAGAATCCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGACCGTCGAGGGCGTTTCGTTCCCGATCGTTTTCCACGACGGCGAACGAGATACCAACATCGGTTCCGTCATCGTTTCTTCTTCGACGGAATTCAAGAATTT
CCAGTCGCTTTTGAGCAAGATGATTGGAATCTCATCGCACCAGTTCACGGTTTACCTCGCGGAGTATAAGATCTCTCTGGATTCCTCGACGAAGATTCGGCGGAGAATTC
CAATCACTGGGAAGGTCAACTTCAGCGCAATCTCCGGCGAGAAGAACAGTTTTTTTCTTGTGGTTTTGAAACGATCAAGACGCGAGAGGAGGCGAAAGGTCGCCCACGAC
AACGAAGACGAATATTACCTCTCGTCGGCGACGAAGACGAAAACAAAGACGAGTCAATCAAAGAAGAATCCACCGGAGAATGTGATGCTGTTGAGACGAAACACCGGCAT
CGAAAAGGAATTGCTCTCCGGCTTCATCTCGCCGGTGATGGATCGATACGAATACGAAGAGCGAATTCGGAAGCTGCAGTCGGAGAAGGAGAAGTACTTAATGAGCATAC
GGCTAAACAATCTGACGATGGGAGGAGGCGGAGATGGCGGCCGGAACGGTTCTGCGAGATCGGAAACGACAGTCTGCCGTGATTGCCTGAGTGCGAAAGAAACCGGGATG
GCGGCCGGATTTCACTGCTGCGCCAACGACGCCGTGACGGCCGGATTCCGATCACACGCGGGTCCGATAGCCCGACCCGTAAAAGAATCCGATTAA
Protein sequenceShow/hide protein sequence
MAETVEGVSFPIVFHDGERDTNIGSVIVSSSTEFKNFQSLLSKMIGISSHQFTVYLAEYKISLDSSTKIRRRIPITGKVNFSAISGEKNSFFLVVLKRSRRERRRKVAHD
NEDEYYLSSATKTKTKTSQSKKNPPENVMLLRRNTGIEKELLSGFISPVMDRYEYEERIRKLQSEKEKYLMSIRLNNLTMGGGGDGGRNGSARSETTVCRDCLSAKETGM
AAGFHCCANDAVTAGFRSHAGPIARPVKESD