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Clc10G19365 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G19365
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box protein CPR30-like
Genome locationClcChr10:33067394..33068071
RNA-Seq ExpressionClc10G19365
SyntenyClc10G19365
Gene Ontology termsNA
InterPro domainsIPR006527 - F-box associated domain, type 1
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137986.3 F-box protein CPR1-like [Cucumis sativus]6.7e-5756.05Show/hide
Query:  GFGYDAKCKDFKVVKVIGF-SDELYSF-PSRVEIYDLSKDRWREIEAPGCG----------------FWAYSENLSETLE--------IIQTFDISEEVF
        GF YDAK KDFKVV+V+ F  ++ YS+ P RVEIYDLSKDRWREI+   CG                F+ ++ N     E        IIQTFDISEEVF
Subjt:  GFGYDAKCKDFKVVKVIGF-SDELYSF-PSRVEIYDLSKDRWREIEAPGCG----------------FWAYSENLSETLE--------IIQTFDISEEVF

Query:  GKILYPETMEGKVKDSNKSLGILNESIVLFDYPFRG-NEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQL
        G+I YPE +  KVK S +SLGILN SIVLFDY   G N+K FDIW+ME DEFG ILW KL T+GP+S++EYPLLFVS +ELLM+C EGE+ILY+IKT + 
Subjt:  GKILYPETMEGKVKDSNKSLGILNESIVLFDYPFRG-NEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQL

Query:  KELPLKGLQIPESSNMLEVTFFL
        KELP+KG Q  +  N ++ TF++
Subjt:  KELPLKGLQIPESSNMLEVTFFL

XP_022935692.1 F-box protein CPR30-like [Cucurbita moschata]6.2e-5558.46Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K +DFKVV+V+ F +   Y  P RVEIYDLSKDRWREIE P CG  FWA S             + +E +EIIQ+FD+SEEVFG+I  PE+ E 
Subjt:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG
        K ++  +SLG+LN SIVLF YP RG+E+ FDIW ME DEFG + WSKLL IGP+  IE PL+FVS+DELLM+ +EG+++LYN +T+QLKELP+ G
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG

XP_022983805.1 F-box protein CPR1-like [Cucurbita maxima]2.0e-5357.95Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K KDFKVV+V+ F +   Y  P R EIYDLSKDRWREIE P CG  FWA S             +  +  EIIQ+FD+SEEVF +I  PE+ EG
Subjt:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG
        + ++  +S+GILN SIVLF YP RG+E+ FDIW ME DEFG + WSKLLTIGP+  IE PL+FVS DELLM+ +EG+++LYN + +QLKELP+KG
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG

XP_031737581.1 F-box/kelch-repeat protein At3g23880-like [Cucumis sativus]9.3e-5958.11Show/hide
Query:  GFGYDAKCKDFKVVKVIG---FSDELYSFPSRVEIYDLSKDRWREIEAPGCG-----------------FWAYS-----ENLSETL-EIIQTFDISEEVF
        GF YDAK KDFKVV+V+      D  +    RVEIYDLSKDRWREI+A GC                  +WAY+     E+ ++ + EIIQTFDISEEVF
Subjt:  GFGYDAKCKDFKVVKVIG---FSDELYSFPSRVEIYDLSKDRWREIEAPGCG-----------------FWAYS-----ENLSETL-EIIQTFDISEEVF

Query:  GKILYPETMEGKVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLK
        G+I YPETM  KVK S +SL ILN S+VL DY +  NEK+FDIW+ME DEFG ILW KLLTIGP+S+IEYPLLFVS +ELLM+C EGE+ILY+IKT + K
Subjt:  GKILYPETMEGKVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLK

Query:  ELPLKGLQIPESSNMLEVTFFL
        ELP+KG Q  E +N ++ TFF+
Subjt:  ELPLKGLQIPESSNMLEVTFFL

XP_038906036.1 F-box protein CPR1-like [Benincasa hispida]1.0e-5764.1Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA-----YSENL----SET---LEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K +DFKVV+V+ F +   Y  P RVEIYDLSKDRWREIE P CG  FWA     Y E      +ET    EIIQTFD+SEEVFG+IL PE+ +G
Subjt:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA-----YSENL----SET---LEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG
           D  +SLG+LN SIVLF YP RG+E++FDIWEME DE G + WSKLLTIGPVS IE PLLFVS DELLM+  EG+VILYNI+T+QLKE+P+KG
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG

TrEMBL top hitse value%identityAlignment
A0A5A7UHP3 F-box protein CPR30-like8.0e-4852.31Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA------------YSENLSETLEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K +DFKVV+V+ F +   Y +P +VE+YDLSK+RWREI+ P  G  FWA            +  +     EII TFD+SEEVFG+I  PE+ +G
Subjt:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA------------YSENLSETLEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG
           D  +SLG+L+  IVLF YP RG+E+ FD+WEM  DE G + WSK+LTIGPVS IE PLLF+S +ELLM+ + G++I+YNI++E++KE+P+KG
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG

A0A5D3DPN6 F-box protein CPR30-like8.0e-4852.31Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA------------YSENLSETLEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K +DFKVV+V+ F +   Y +P +VE+YDLSK+RWREI+ P  G  FWA            +  +     EII TFD+SEEVFG+I  PE+ +G
Subjt:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWA------------YSENLSETLEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG
           D  +SLG+L+  IVLF YP RG+E+ FD+WEM  DE G + WSK+LTIGPVS IE PLLF+S +ELLM+ + G++I+YNI++E++KE+P+KG
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG

A0A6J1F5F2 F-box protein CPR30-like7.7e-5153.55Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSDEL-YSFPSRVEIYDLSKDRWREIEAPGCG--FWAYSENL------------SETLEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K KDFKVV+V+ F + + + +PSRVEIYDLSKDRWREIE P CG  FW  S  +             E  EIIQ+FD+SEEVFG+I  PE+ + 
Subjt:  GFGYDAKCKDFKVVKVIGFSDEL-YSFPSRVEIYDLSKDRWREIEAPGCG--FWAYSENL------------SETLEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKGLQIPE
        +     +S+G+LN SIVLF YP    EK F+IWEME DEFG + WSKLLTIGP+  I  PL+FV  +ELLM+  EG+V+LYN +T+QL+ELP+KG   PE
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKGLQIPE

Query:  SSNMLEVTFFL
             + T F+
Subjt:  SSNMLEVTFFL

A0A6J1F6B1 F-box protein CPR30-like3.0e-5558.46Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K +DFKVV+V+ F +   Y  P RVEIYDLSKDRWREIE P CG  FWA S             + +E +EIIQ+FD+SEEVFG+I  PE+ E 
Subjt:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG
        K ++  +SLG+LN SIVLF YP RG+E+ FDIW ME DEFG + WSKLL IGP+  IE PL+FVS+DELLM+ +EG+++LYN +T+QLKELP+ G
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG

A0A6J1J6Y5 F-box protein CPR1-like9.7e-5457.95Show/hide
Query:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG
        GFGYD+K KDFKVV+V+ F +   Y  P R EIYDLSKDRWREIE P CG  FWA S             +  +  EIIQ+FD+SEEVF +I  PE+ EG
Subjt:  GFGYDAKCKDFKVVKVIGFSD-ELYSFPSRVEIYDLSKDRWREIEAPGCG--FWAYS------------ENLSETLEIIQTFDISEEVFGKILYPETMEG

Query:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG
        + ++  +S+GILN SIVLF YP RG+E+ FDIW ME DEFG + WSKLLTIGP+  IE PL+FVS DELLM+ +EG+++LYN + +QLKELP+KG
Subjt:  KVKDSNKSLGILNESIVLFDYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKG

SwissProt top hitse value%identityAlignment
Q9FFS9 Putative F-box protein At5g415108.0e-0525.26Show/hide
Query:  MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSR----VEIYDLSKDRWRE---------------IEAPGCGFWAYSENLSETL-EIIQTFDISEEVF
        + H     GY  K +    +K + F D  Y  P       EIYD     W                 +   G  +W   E  ++   + I  FD + E F
Subjt:  MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSR----VEIYDLSKDRWRE---------------IEAPGCGFWAYSENLSETL-EIIQTFDISEEVF

Query:  GKILYPETMEGKVKDSNKSLGILNES--IVLFDYPFRGN--EKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDE--LLMKCDEGE
        G +L   T     + S  SL  + E     LF +    +  E  F+IW     E  ++ WSK L +    ++E PL F   +E  + M  D GE
Subjt:  GKILYPETMEGKVKDSNKSLGILNES--IVLFDYPFRGN--EKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDE--LLMKCDEGE

Arabidopsis top hitse value%identityAlignment
AT5G41510.1 F-box and associated interaction domains-containing protein5.7e-0625.26Show/hide
Query:  MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSR----VEIYDLSKDRWRE---------------IEAPGCGFWAYSENLSETL-EIIQTFDISEEVF
        + H     GY  K +    +K + F D  Y  P       EIYD     W                 +   G  +W   E  ++   + I  FD + E F
Subjt:  MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSR----VEIYDLSKDRWRE---------------IEAPGCGFWAYSENLSETL-EIIQTFDISEEVF

Query:  GKILYPETMEGKVKDSNKSLGILNES--IVLFDYPFRGN--EKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDE--LLMKCDEGE
        G +L   T     + S  SL  + E     LF +    +  E  F+IW     E  ++ WSK L +    ++E PL F   +E  + M  D GE
Subjt:  GKILYPETMEGKVKDSNKSLGILNES--IVLFDYPFRGN--EKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDE--LLMKCDEGE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACATCTTCACACAGGATTCGGGTACGACGCGAAATGTAAGGATTTTAAAGTGGTTAAAGTTATTGGGTTTTCAGATGAATTGTATTCTTTTCCTTCAAGAGTGGA
AATTTACGATTTGAGCAAAGATAGATGGAGAGAAATTGAAGCTCCTGGTTGTGGATTTTGGGCGTATAGTGAAAACCTATCTGAAACACTTGAAATAATACAAACATTTG
ACATAAGCGAAGAGGTTTTTGGCAAAATTTTGTATCCAGAGACTATGGAAGGGAAGGTGAAGGATAGTAATAAAAGTTTAGGGATTTTAAACGAATCAATTGTTCTATTT
GATTATCCATTTCGTGGGAATGAAAAAACATTTGACATTTGGGAGATGGAGAATGATGAATTTGGTGTTATTTTGTGGTCGAAGCTATTGACAATTGGCCCTGTTTCTAG
AATTGAGTATCCATTATTGTTTGTGAGCTACGATGAACTTTTAATGAAGTGTGATGAAGGAGAGGTGATTTTGTACAATATTAAAACTGAACAGTTGAAAGAGCTCCCAC
TAAAAGGGCTTCAAATACCTGAAAGTAGCAACATGTTAGAAGTAACCTTTTTTTTGTTAAGAGTTTGTTGTCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAACATCTTCACACAGGATTCGGGTACGACGCGAAATGTAAGGATTTTAAAGTGGTTAAAGTTATTGGGTTTTCAGATGAATTGTATTCTTTTCCTTCAAGAGTGGA
AATTTACGATTTGAGCAAAGATAGATGGAGAGAAATTGAAGCTCCTGGTTGTGGATTTTGGGCGTATAGTGAAAACCTATCTGAAACACTTGAAATAATACAAACATTTG
ACATAAGCGAAGAGGTTTTTGGCAAAATTTTGTATCCAGAGACTATGGAAGGGAAGGTGAAGGATAGTAATAAAAGTTTAGGGATTTTAAACGAATCAATTGTTCTATTT
GATTATCCATTTCGTGGGAATGAAAAAACATTTGACATTTGGGAGATGGAGAATGATGAATTTGGTGTTATTTTGTGGTCGAAGCTATTGACAATTGGCCCTGTTTCTAG
AATTGAGTATCCATTATTGTTTGTGAGCTACGATGAACTTTTAATGAAGTGTGATGAAGGAGAGGTGATTTTGTACAATATTAAAACTGAACAGTTGAAAGAGCTCCCAC
TAAAAGGGCTTCAAATACCTGAAAGTAGCAACATGTTAGAAGTAACCTTTTTTTTGTTAAGAGTTTGTTGTCTGTAG
Protein sequenceShow/hide protein sequence
MQHLHTGFGYDAKCKDFKVVKVIGFSDELYSFPSRVEIYDLSKDRWREIEAPGCGFWAYSENLSETLEIIQTFDISEEVFGKILYPETMEGKVKDSNKSLGILNESIVLF
DYPFRGNEKTFDIWEMENDEFGVILWSKLLTIGPVSRIEYPLLFVSYDELLMKCDEGEVILYNIKTEQLKELPLKGLQIPESSNMLEVTFFLLRVCCL