CuGenDBv2

Gene ID	Clc10G20320
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Genome location	ClcChr10:33855024..33855956
RNA-Seq Expression	Clc10G20320
Synteny	Clc10G20320
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6580574.1 hypothetical protein SDJN03_20576, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-57

78.21

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTT YCIST  + RPPR+AYINL NWTD DNE  KSAIPR RR V VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R  N NRNR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

KAG7017326.1 hypothetical protein SDJN02_19189, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-57

78.21

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQ+YLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R  N NRNR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

XP_022934190.1 uncharacterized protein LOC111441435 [Cucurbita moschata]

5.8e-58

78.85

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R  N NRNR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

XP_022983914.1 uncharacterized protein LOC111482393 [Cucurbita maxima]

1.5e-58

79.49

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R  N NRNR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

XP_023528009.1 uncharacterized protein LOC111791056 [Cucurbita pepo subsp. pepo]

1.5e-58

79.49

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R  N NRNR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFM8 Uncharacterized protein

1.7e-55

73.91

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTTK+CIS A + R PR+ YINL NWT+S+NEIVKSAIP+ARR V VVDGVSCRQMYLRSY FS KKESV EKT++CL KVKEKLGQRKRR  GE 
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  RNLNRN---------RKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN
        RNL+ N         +KR +KCLIWKKMK+FSCSFI+FGIFRR+LSCAA+IDVVEQS GRN
Subjt:  RNLNRN---------RKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN

A0A1S3B628 uncharacterized protein LOC103486422

3.8e-55

75.31

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTTK+CIS A + R PR+ YINL NWTDS+NEIVKSA+P+ RR V VVDGVSCRQMYLRSYKFS KKESV EKT++CL KVKEKLGQRKR   GE 
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R-------NLNRNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN
                NLN NRKRKK   KCLIWKKMK+FSCSFI+FGIFRRILSCAA+IDVVEQS GRN
Subjt:  R-------NLNRNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN

A0A5D3DNA8 Uncharacterized protein

3.8e-55

75.31

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTTK+CIS A + R PR+ YINL NWTDS+NEIVKSA+P+ RR V VVDGVSCRQMYLRSYKFS KKESV EKT++CL KVKEKLGQRKR   GE 
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R-------NLNRNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN
                NLN NRKRKK   KCLIWKKMK+FSCSFI+FGIFRRILSCAA+IDVVEQS GRN
Subjt:  R-------NLNRNRKRKK---KCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRN

A0A6J1F6Z2 uncharacterized protein LOC111441435

2.8e-58

78.85

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R  N NRNR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVE  SG NGN
Subjt:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

A0A6J1J8Y5 uncharacterized protein LOC111482393

7.4e-59

79.49

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Query:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK
        MSAVCTT YCIST  + RPPR+AYINL NWTDSDNE  KSAIPR RR V VVDGVSCRQMYLRSYKFST KESV EKTRRCL KVKEKLGQRKRR+SG+K
Subjt:  MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEK

Query:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN
        R  N NRNR RK+KC IW+KMK+FSCSF+LF IFRRIL+C+AS+DVVEQ SG NGN
Subjt:  R--NLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G46300.1 unknown protein

1.5e-06

33.33

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Query:  PRSAYINLYNWTDSDNEIVKSA-IPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRNRKRKKKCLIWKK
        P   Y NLY W  ++ E V+S     ++   +VVD +SCRQMYLRSY FST +E+  +        V  +  Q   R  G ++   +N  R         
Subjt:  PRSAYINLYNWTDSDNEIVKSA-IPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRNRKRKKKCLIWKK

Query:  MKEFSCSFILFGIFRRILSCAASIDV
         K +SC   +F + R+ LSCA++  V
Subjt:  MKEFSCSFILFGIFRRILSCAASIDV

AT3G46310.1 unknown protein

1.4e-04

36.76

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Query:  CISTAGNS---RPPRSAYINLYNWTDSDNEIVKS-AIPRARRGVSVVDGVSCRQMYLRSYKFSTKKES
        C++   N+   RP R+ +  ++ W  ++ E V+S +   + R  + V+ +SCRQMYLRSY FS K+E+
Subjt:  CISTAGNS---RPPRSAYINLYNWTDSDNEIVKS-AIPRARRGVSVVDGVSCRQMYLRSYKFSTKKES

AT5G02640.1 unknown protein

2.8e-18

38.64

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Query:  MSAVCTTKYCISTAGNS----RPPRSAYINLYNWTDSDNEIVKS-----AIPRARRGVSVVDGVSCRQMYLRSYKFS-----TKKESVPEKTR-RCLGKV
        M++VC +  CI+ A +     RP R++Y+NLY W +SD E V+S      +P AR    VVD +SCRQMYLRSY FS     +K E V   T+  CLG+V
Subjt:  MSAVCTTKYCISTAGNS----RPPRSAYINLYNWTDSDNEIVKS-----AIPRARRGVSVVDGVSCRQMYLRSYKFS-----TKKESVPEKTR-RCLGKV

Query:  KEKLGQRKR---------------RRSGEKRNLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVE
        K     R++               RR GEKR ++R  K+++ C             ++  IFRR+LSCAA++DVV+
Subjt:  KEKLGQRKR---------------RRSGEKRNLNRNRKRKKKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVE

Sequences

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CDS sequence

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ATGAGCGCCGTCTGCACAACGAAGTACTGCATCAGCACCGCCGGCAATAGCCGTCCGCCGCGCTCGGCCTACATCAACCTCTACAACTGGACGGATTCGGACAACGAGAT
CGTGAAATCGGCGATTCCGAGAGCGAGGCGCGGAGTTTCGGTAGTGGATGGAGTATCGTGCAGGCAAATGTACTTGAGGAGCTATAAATTTTCGACGAAGAAGGAATCGG
TGCCGGAGAAAACGAGGAGGTGTTTGGGGAAAGTGAAGGAGAAATTAGGTCAGAGAAAGAGGAGAAGATCGGGGGAGAAGAGGAATCTGAATCGGAATCGAAAGAGGAAG
AAGAAGTGTTTGATTTGGAAGAAGATGAAGGAATTTTCGTGTAGTTTCATTCTGTTCGGGATTTTTCGAAGGATTTTGTCGTGTGCTGCGAGTATTGATGTGGTGGAACA
GAGTAGTGGAAGAAATGGTAATTGA

mRNA sequence

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CTCGGATCCATTTTCAGCTTCTTATTTACGAGAATTCCCCCAAATTTTCTTTATAAAATCAAACAAATCAATAATAAAGGACATATCTCATAATGCTTACGATCCTCCTC
GCCGTTCTCCGCCATTAACGATCATCGCAAGGGAGGAAAAAAAAAAAAACTTCAGAAAAGATGAGCGCCGTCTGCACAACGAAGTACTGCATCAGCACCGCCGGCAATAG
CCGTCCGCCGCGCTCGGCCTACATCAACCTCTACAACTGGACGGATTCGGACAACGAGATCGTGAAATCGGCGATTCCGAGAGCGAGGCGCGGAGTTTCGGTAGTGGATG
GAGTATCGTGCAGGCAAATGTACTTGAGGAGCTATAAATTTTCGACGAAGAAGGAATCGGTGCCGGAGAAAACGAGGAGGTGTTTGGGGAAAGTGAAGGAGAAATTAGGT
CAGAGAAAGAGGAGAAGATCGGGGGAGAAGAGGAATCTGAATCGGAATCGAAAGAGGAAGAAGAAGTGTTTGATTTGGAAGAAGATGAAGGAATTTTCGTGTAGTTTCAT
TCTGTTCGGGATTTTTCGAAGGATTTTGTCGTGTGCTGCGAGTATTGATGTGGTGGAACAGAGTAGTGGAAGAAATGGTAATTGATTCTGAGTTTAGAGTTTGATCTGTT
CTTTCTTCTTCTTCTTCATCTTCATCTTTCTTCTCAGTTTTCTTCTGTAATTGATTTTGATAATGGATTTTGTTTGTGTTTAGTTCATTAATTTTTAGGATGAACTTGCT
TTCTTCTTAACAGATTGAAATCATCTTCATCGCTTCATATTTCATTCAGATCTCTCTTCCTTCTTATCTATAGAAATTATTCATCGAATAGTTTGTCATCTAAGAGGCTT
TCATTTTTCTTTGTTACATCATAAATTTGGACTCTAGAGTTAATCTTTTTTAT

Protein sequence

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MSAVCTTKYCISTAGNSRPPRSAYINLYNWTDSDNEIVKSAIPRARRGVSVVDGVSCRQMYLRSYKFSTKKESVPEKTRRCLGKVKEKLGQRKRRRSGEKRNLNRNRKRK
KKCLIWKKMKEFSCSFILFGIFRRILSCAASIDVVEQSSGRNGN

Clc10G20320 (gene) of Watermelon (cordophanus) v2 genome