; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G20640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G20640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionmitochondrial import inner membrane translocase subunit Tim9
Genome locationClcChr10:34112789..34115603
RNA-Seq ExpressionClc10G20640
SyntenyClc10G20640
Gene Ontology termsNA
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON38573.1 Tim10/DDP family zinc finger [Parasponia andersonii]6.7e-4193.55Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+ LPEEDKL+M+TMIDQLQIRDSLRMYNSLVERCFTDCID FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_004137789.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucumis sativus]1.9e-4397.85Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022145535.1 mitochondrial import inner membrane translocase subunit Tim9-like [Momordica charantia]2.7e-4295.7Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+MLADL+GLP+EDKLKMA+MIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022934857.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita moschata]1.9e-4398.92Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_042940042.1 mitochondrial import inner membrane translocase subunit Tim9 [Carya illinoinensis]4.3e-4090.32Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+MLADLE LPEEDK++M+TMI+QLQIRDSLRMYNSLVERCFTDC+D FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAAT+D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

TrEMBL top hitse value%identityAlignment
A0A0A0LFK3 zf-Tim10_DDP domain-containing protein9.1e-4497.85Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A1S3B5G6 mitochondrial import inner membrane translocase subunit Tim99.1e-4497.85Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A5D3DN53 Mitochondrial import inner membrane translocase subunit Tim99.1e-4497.85Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1F3Y8 mitochondrial import inner membrane translocase subunit Tim99.1e-4498.92Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1IZ98 mitochondrial import inner membrane translocase subunit Tim99.1e-4498.92Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

SwissProt top hitse value%identityAlignment
O74700 Mitochondrial import inner membrane translocase subunit TIM95.3e-1746.15Show/hide
Query:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L  +++ +   +++Q Q++D +R+Y++LVERCFTDC+++F    LT +E+TC+ +C+EKFLKHS RVG RF E N
Subjt:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

P57745 Mitochondrial import inner membrane translocase subunit Tim93.1e-1747.44Show/hide
Query:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L   ++ + + +I+  Q++D +R+Y++LVERCFTDC+++F    LT +E+TC+ RC+EKFLKHS RVG+RF E N
Subjt:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

Q9XGX7 Mitochondrial import inner membrane translocase subunit Tim92.0e-4083.87Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+ML DL+GLPEEDK++MA M+DQLQIRDSLRMYNSLVERCFTDC+D F+RK+L KQEE+CVRRCAEKFLKHSMRVGMRFAELNQG AT D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX8 Mitochondrial import inner membrane translocase subunit Tim96.9e-4184.95Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNML DL+ LPEEDKLKMA+MI+QLQIRDSLRMYN+LVERCFTDC+D+F+RK+L KQEETCV+RCAEKFLKHSMRVG+RFAELNQGAAT+D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX9 Mitochondrial import inner membrane translocase subunit TIM91.6e-3780.65Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD +M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Arabidopsis top hitse value%identityAlignment
AT3G46560.1 Tim10/DDP family zinc finger protein1.1e-3880.65Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD +M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAACATGCTTGCTGATTTGGAGGGTCTTCCTGAAGAAGACAAGCTCAAAATGGCTACCATGATCGACCAGCTGCAGATCCGAGACAGCCTGAGAATGTACAA
CTCATTGGTGGAGAGATGCTTCACAGATTGTATAGACAACTTTCAGCGAAAATCCTTAACCAAGCAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGC
ACTCAATGCGCGTTGGAATGAGATTTGCCGAGCTCAACCAAGGAGCCGCTACCTCGGATTAA
mRNA sequenceShow/hide mRNA sequence
CCAACATTAAGTGTGTTCTTTTCAATTCAGTTGAGATAAATTTGATTGATTTTCAATTGGTTCGATAGATTATTAGGTTAGATAAATATTCCAATAAGTTGATCTTAAAT
TTGATTTTCCTTTTCCAAAAATCGAAACTGAATCAAATCACTTTCATGAGTGCCATAAAAGTATAACTGAAAATATAGGGGTTGAAGTGGGAGACCAGATCGGAATTATA
TAAACATTCAAGGACCATTTAGCAACAAAACCACTACTTCGCTTTGCCTTTCTTCAACCTACAATACTAATTTAGCTAATAGCGGCGATACAAGAAAAAAAACCAGAGAA
GTTAAACCCTAAACCCTTTGCTTTAATTGGAATCGAAGATGGACAAGAACATGCTTGCTGATTTGGAGGGTCTTCCTGAAGAAGACAAGCTCAAAATGGCTACCATGATC
GACCAGCTGCAGATCCGAGACAGCCTGAGAATGTACAACTCATTGGTGGAGAGATGCTTCACAGATTGTATAGACAACTTTCAGCGAAAATCCTTAACCAAGCAAGAGGA
AACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGCACTCAATGCGCGTTGGAATGAGATTTGCCGAGCTCAACCAAGGAGCCGCTACCTCGGATTAATGTTGCATCA
GAGGACACCCCGGACATATTCTCGAGACCTTAAGTTCTTTCACTTCTGGATTTGTAGTATGTTTCCTCCATATTATTGAGACCTTCAGTTCTTTCTTCCGTATTCTTGAA
ACCTTTCGTTCTTTTACCTCTGAATTTATAGTGTGTTTCTTCATTATATGTGTTGCAGCTGGGATTAAGTTGTAATTTGATTTGACTTATGAATTAAAGTTTTAGTAGCA
CACTTTCAATAAATGTTAGATTCCATATCCCCCAGGATGATAACATATATTTACTCAAGCTTGTAGCCGTACAACCGAAGCTGGTGTAGCTTAAGTTTTTTGCTTCTTGT
TGGTAATATGCCATTTTCTTCATCCTCATAACCGATTTGTTAGAAATGATTGGAGATCAAATCTTCGACAGTTAGATGAACTGCAATTAGTTGGGTTTGTTTGGTAGAAG
CTTCTGATGGACGCACTTCCATCTTCTCATCTAATCTAAAGCAACTTGTCTTTTCCCC
Protein sequenceShow/hide protein sequence
MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFTDCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD