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Clc10G20700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G20700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRHOMBOID-like protein
Genome locationClcChr10:34154647..34155958
RNA-Seq ExpressionClc10G20700
SyntenyClc10G20700
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004252 - serine-type endopeptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044094.1 RHOMBOID-like protein 1 isoform X2 [Cucumis melo var. makuwa]3.2e-0567.39Show/hide
Query:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
        K+ + +ASRAHKSRPQ+SL+K+R+ SITDSS  IHCSIV S+GE C
Subjt:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
TYK25043.1 RHOMBOID-like protein 1 isoform X2 [Cucumis melo var. makuwa]3.2e-0567.39Show/hide
Query:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
        K+ + +ASRAHKSRPQ+SL+K+R+ SITDSS  IHCSIV S+GE C
Subjt:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
TrEMBL top hitse value%identityAlignment
A0A5A7TLL8 RHOMBOID-like protein1.6e-0567.39Show/hide
Query:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
        K+ + +ASRAHKSRPQ+SL+K+R+ SITDSS  IHCSIV S+GE C
Subjt:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
A0A5D3DN31 RHOMBOID-like protein1.6e-0567.39Show/hide
Query:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
        K+ + +ASRAHKSRPQ+SL+K+R+ SITDSS  IHCSIV S+GE C
Subjt:  KQLMKLASRAHKSRPQLSLQKMRRASITDSS--IHCSIVMSIGEIC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTTGCCGAAGCCTGATGGTGCAAACGAGGAATGTGATTTGATTTCCGGCTCTCTTCCCATTAATATTCCTAAATTTCATGATGCTCTTTGTACTACACTCGCTTT
TACTCTTTCTTCAAAAGAATTTGGCATTTTGCATGGCTCTTGCTCAAGAAGCTCGTTTATGTTCATCCAACCTGCATTTGTGACACGATGTCCAGCACTGGGGAAAAACA
TCTCCAAGACGATGCCGATGAAGCAACTGATGAAATTAGCAAGCAGAGCGCATAAGAGTCGACCACAGCTTTCGCTGCAAAAGATGAGGAGGGCATCAATAACTGATTCA
TCAATTCATTGCTCTATTGTCATGAGCATTGGGGAGATTTGCAGAGTCAATGATGCTCTCAGGGTTGCTGCCCAAAATGCGCAAGCAGTGGACTGCCTGGAGAATCTCCA
ATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGTTGCCGAAGCCTGATGGTGCAAACGAGGAATGTGATTTGATTTCCGGCTCTCTTCCCATTAATATTCCTAAATTTCATGATGCTCTTTGTACTACACTCGCTTT
TACTCTTTCTTCAAAAGAATTTGGCATTTTGCATGGCTCTTGCTCAAGAAGCTCGTTTATGTTCATCCAACCTGCATTTGTGACACGATGTCCAGCACTGGGGAAAAACA
TCTCCAAGACGATGCCGATGAAGCAACTGATGAAATTAGCAAGCAGAGCGCATAAGAGTCGACCACAGCTTTCGCTGCAAAAGATGAGGAGGGCATCAATAACTGATTCA
TCAATTCATTGCTCTATTGTCATGAGCATTGGGGAGATTTGCAGAGTCAATGATGCTCTCAGGGTTGCTGCCCAAAATGCGCAAGCAGTGGACTGCCTGGAGAATCTCCA
ATTTTAG
Protein sequenceShow/hide protein sequence
MSLPKPDGANEECDLISGSLPINIPKFHDALCTTLAFTLSSKEFGILHGSCSRSSFMFIQPAFVTRCPALGKNISKTMPMKQLMKLASRAHKSRPQLSLQKMRRASITDS
SIHCSIVMSIGEICRVNDALRVAAQNAQAVDCLENLQF