; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc10G21160 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G21160
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCopper transporter
Genome locationClcChr10:34462040..34462872
RNA-Seq ExpressionClc10G21160
SyntenyClc10G21160
Gene Ontology termsGO:0006878 - cellular copper ion homeostasis (biological process)
GO:0035434 - copper ion transmembrane transport (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005375 - copper ion transmembrane transporter activity (molecular function)
InterPro domainsIPR007274 - Ctr copper transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044132.1 copper transporter 4 [Cucumis melo var. makuwa]1.1e-6390.51Show/hide
Query:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY
        +KTTSHHNLGA+PPPSPETNPAEKT AHKSLYWGH AQVLFTGWPGTNSGMYALAVIFVFVLAV+VEWLNSCNFMKQ  E+VW VV QTAIHAVRTGLSY
Subjt:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY

Query:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV
        MVMLAVMSFNGGIFLAAVGGHAVGFVLFK+RGE K V
Subjt:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV

XP_004137921.2 copper transporter 4 [Cucumis sativus]1.0e-6189.05Show/hide
Query:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY
        +KTTSHHNLGA+PPPS ETNPAEK V HKSLYWGH AQVLFTGWPGTNSGMYALAVIFVFVLAV+VEWLNSCNFMKQ  E+V  VV+QTAIHAVRTGLSY
Subjt:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY

Query:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV
        MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGE K V
Subjt:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV

XP_022941866.1 copper transporter 4-like [Cucurbita moschata]1.8e-5378.17Show/hide
Query:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA
        MALKTTSHHNLGA+PPP+ ETNPA      KTV HK+LYWGH AQVLFTGWP TNS MYALAVIFVFVLAV VEWL   NFMK+ A+NV  VVLQTAIHA
Subjt:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA

Query:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK
        VRTGL+YMV+L+VMSFNGGIFLAAVGGHAVGFVLF+ R + K
Subjt:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK

XP_022971334.1 copper transporter 6-like [Cucurbita maxima]6.1e-5478.87Show/hide
Query:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA
        MALKTTSHHNLG +PPP+ E+NPA      KTV HK+LYWGH AQVLFTGWPGTNS MYALAVIFVFVLAV VEWL   NFMKQ A+NV  VVLQ+AIHA
Subjt:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA

Query:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK
        VRTGL YMVML+VMSFNGGIFLAAVGGHAVGFVLF+ R E K
Subjt:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK

XP_023540707.1 copper transporter 4-like [Cucurbita pepo subsp. pepo]3.6e-5479.58Show/hide
Query:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA
        MALKTTSHHNLGA+PPP+ ETNPA      KTV HK+LYWGH AQVLFTGWPGTNS MYALAVIFVFVLAV VEWL   NFMKQ A+NV  VVLQTAIHA
Subjt:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA

Query:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK
        VRTGL+YMV+L+VMSFNGGIFLAAVGGHAVGFVLF+ R + K
Subjt:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK

TrEMBL top hitse value%identityAlignment
A0A0A0LD01 Copper transporter5.0e-6289.05Show/hide
Query:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY
        +KTTSHHNLGA+PPPS ETNPAEK V HKSLYWGH AQVLFTGWPGTNSGMYALAVIFVFVLAV+VEWLNSCNFMKQ  E+V  VV+QTAIHAVRTGLSY
Subjt:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY

Query:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV
        MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGE K V
Subjt:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV

A0A5A7TLC7 Copper transporter5.3e-6490.51Show/hide
Query:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY
        +KTTSHHNLGA+PPPSPETNPAEKT AHKSLYWGH AQVLFTGWPGTNSGMYALAVIFVFVLAV+VEWLNSCNFMKQ  E+VW VV QTAIHAVRTGLSY
Subjt:  LKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSY

Query:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV
        MVMLAVMSFNGGIFLAAVGGHAVGFVLFK+RGE K V
Subjt:  MVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAKMV

A0A6J1CV92 Copper transporter7.2e-5378.83Show/hide
Query:  MALKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGL
        + LK TS HNLG +PPP+ ETN A KTV HKSLYW H AQVLFTGWPG +S MYALAVIFVFVLAVLVEWL  CNFMKQ AE+V   VLQTAIHAVRTGL
Subjt:  MALKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGL

Query:  SYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK
        SYMVML+VMSFNGGIFLAAVGGHAVGFVLF+ R + K
Subjt:  SYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK

A0A6J1FMA0 Copper transporter8.5e-5478.17Show/hide
Query:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA
        MALKTTSHHNLGA+PPP+ ETNPA      KTV HK+LYWGH AQVLFTGWP TNS MYALAVIFVFVLAV VEWL   NFMK+ A+NV  VVLQTAIHA
Subjt:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA

Query:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK
        VRTGL+YMV+L+VMSFNGGIFLAAVGGHAVGFVLF+ R + K
Subjt:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK

A0A6J1I894 Copper transporter2.9e-5478.87Show/hide
Query:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA
        MALKTTSHHNLG +PPP+ E+NPA      KTV HK+LYWGH AQVLFTGWPGTNS MYALAVIFVFVLAV VEWL   NFMKQ A+NV  VVLQ+AIHA
Subjt:  MALKTTSHHNLGALPPPSPETNPAE-----KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHA

Query:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK
        VRTGL YMVML+VMSFNGGIFLAAVGGHAVGFVLF+ R E K
Subjt:  VRTGLSYMVMLAVMSFNGGIFLAAVGGHAVGFVLFKRRGEAK

SwissProt top hitse value%identityAlignment
Q39065 Copper transporter 13.3e-2653.7Show/hide
Query:  KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQK---AENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG
        K + H + +WG   +VLF+GWPGT+SGMYAL +IFVF LAVL EWL   + ++     + N    ++QTA++ +R GL+Y+VMLAVMSFN G+FL A+ G
Subjt:  KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQK---AENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG

Query:  HAVGFVLF
        HAVGF+LF
Subjt:  HAVGFVLF

Q60EN8 Copper transporter 26.8e-2446.34Show/hide
Query:  ALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEW----LNSCNFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAV
        A+PPP      A     H + +WG   +VLFT WPG   GMYALA++F+F LAVL+E+    +      +++A       L+TA+HAVR G++Y++MLA+
Subjt:  ALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEW----LNSCNFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAV

Query:  MSFNGGIFLAAVGGHAVGFVLFK
        MSFNGG+FLA V GHA GF+ F+
Subjt:  MSFNGGIFLAAVGGHAVGFVLFK

Q8GWP3 Copper transporter 63.6e-2545.16Show/hide
Query:  GALPPPSPET----NPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMV-VLQTAIHAVRTGLSYMVML
        G +PP SP +      +   + H + +WG   ++LF+GWPGT+ GMY L +I VF+LAV+VEWL   + ++ +        ++QTA++ ++TGL+Y+VML
Subjt:  GALPPPSPET----NPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMV-VLQTAIHAVRTGLSYMVML

Query:  AVMSFNGGIFLAAVGGHAVGFVLF
        AVMSFNGG+F+ A+ G AVGF+LF
Subjt:  AVMSFNGGIFLAAVGGHAVGFVLF

Q8SAA5 Copper transporter 42.0e-2852.63Show/hide
Query:  PAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSC---NFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAA
        P   ++ H + YWG+  QVLF+GWPG++ GMYALA+IFVF LA L EWL  C   + +KQ A+ +  V  +TA++ V++G SY+V+LAV+SFNGG+FLAA
Subjt:  PAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSC---NFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAA

Query:  VGGHAVGFVLFKRR
        + GHA+GF +F+ R
Subjt:  VGGHAVGFVLFKRR

Q9STG2 Copper transporter 25.6e-2644.62Show/hide
Query:  HHNLGALPPPSPETNPAEK------TVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMK-QKAENVWMVVLQTAIHAVRTGL
        H ++  +PPPSP ++           + H + +WG   +VLF+GWPGT+SGMYAL +I +F+LAV+ EWL     ++   + N    + QTA++ ++TGL
Subjt:  HHNLGALPPPSPETNPAEK------TVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMK-QKAENVWMVVLQTAIHAVRTGL

Query:  SYMVMLAVMSFNGGIFLAAVGGHAVGFVLF
        SY+VMLAVMSFN G+F+ A+ G+ VGF LF
Subjt:  SYMVMLAVMSFNGGIFLAAVGGHAVGFVLF

Arabidopsis top hitse value%identityAlignment
AT2G26975.1 Ctr copper transporter family2.6e-2645.16Show/hide
Query:  GALPPPSPET----NPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMV-VLQTAIHAVRTGLSYMVML
        G +PP SP +      +   + H + +WG   ++LF+GWPGT+ GMY L +I VF+LAV+VEWL   + ++ +        ++QTA++ ++TGL+Y+VML
Subjt:  GALPPPSPET----NPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMV-VLQTAIHAVRTGLSYMVML

Query:  AVMSFNGGIFLAAVGGHAVGFVLF
        AVMSFNGG+F+ A+ G AVGF+LF
Subjt:  AVMSFNGGIFLAAVGGHAVGFVLF

AT2G37925.1 copper transporter 41.5e-2952.63Show/hide
Query:  PAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSC---NFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAA
        P   ++ H + YWG+  QVLF+GWPG++ GMYALA+IFVF LA L EWL  C   + +KQ A+ +  V  +TA++ V++G SY+V+LAV+SFNGG+FLAA
Subjt:  PAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSC---NFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAA

Query:  VGGHAVGFVLFKRR
        + GHA+GF +F+ R
Subjt:  VGGHAVGFVLFKRR

AT3G46900.1 copper transporter 24.0e-2744.62Show/hide
Query:  HHNLGALPPPSPETNPAEK------TVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMK-QKAENVWMVVLQTAIHAVRTGL
        H ++  +PPPSP ++           + H + +WG   +VLF+GWPGT+SGMYAL +I +F+LAV+ EWL     ++   + N    + QTA++ ++TGL
Subjt:  HHNLGALPPPSPETNPAEK------TVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMK-QKAENVWMVVLQTAIHAVRTGL

Query:  SYMVMLAVMSFNGGIFLAAVGGHAVGFVLF
        SY+VMLAVMSFN G+F+ A+ G+ VGF LF
Subjt:  SYMVMLAVMSFNGGIFLAAVGGHAVGFVLF

AT5G59030.1 copper transporter 12.3e-2753.7Show/hide
Query:  KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQK---AENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG
        K + H + +WG   +VLF+GWPGT+SGMYAL +IFVF LAVL EWL   + ++     + N    ++QTA++ +R GL+Y+VMLAVMSFN G+FL A+ G
Subjt:  KTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQK---AENVWMVVLQTAIHAVRTGLSYMVMLAVMSFNGGIFLAAVGG

Query:  HAVGFVLF
        HAVGF+LF
Subjt:  HAVGFVLF

AT5G59040.1 copper transporter 32.6e-2343.2Show/hide
Query:  ALPPPSPET----NPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAV
        A P PSP +          + H + +WG   +VLF GWPGT+  MY + +  +FV++   E L+ C FMK    ++   +LQTA++ VR  LSY+VMLAV
Subjt:  ALPPPSPET----NPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAV

Query:  MSFNGGIFLAAVGGHAVGFVLFKRR
        MSFNGG+F+AA+ G  +GF++F  R
Subjt:  MSFNGGIFLAAVGGHAVGFVLFKRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTGAAAACGACGTCTCATCATAACCTGGGCGCCCTCCCACCACCGTCCCCGGAGACCAATCCGGCGGAAAAGACAGTGGCGCACAAGTCTTTATACTGGGGACA
CCAAGCCCAAGTCCTGTTCACCGGCTGGCCGGGTACCAACTCCGGCATGTACGCATTGGCGGTGATTTTCGTGTTCGTTCTGGCGGTGCTCGTGGAATGGCTTAATTCCT
GCAACTTCATGAAGCAAAAGGCCGAGAATGTGTGGATGGTGGTACTGCAGACGGCGATACACGCAGTACGTACGGGTTTAAGTTACATGGTGATGCTAGCCGTGATGTCG
TTCAACGGCGGAATCTTCCTGGCTGCGGTGGGCGGCCATGCTGTGGGCTTCGTTCTGTTCAAAAGGCGAGGCGAAGCAAAGATGGTCCAATAA
mRNA sequenceShow/hide mRNA sequence
CTTGGACCAAACCACGTCAGTGAAACACACACGCTTTCTAGAACGTGAGTAAGAACAACACCACCAAAAGAAATTTTCTTCTTTTTGTTTGCAATTTCCGGATTTTATAC
CCCCCCCCCCCCTTGTTTCTCCTAAAATAGTCACATCATTCATCGGGAAAAAGGAAAAAAACAGTCTCGAGAAGACTAGACTACGATGGCTCTGAAAACGACGTCTCATC
ATAACCTGGGCGCCCTCCCACCACCGTCCCCGGAGACCAATCCGGCGGAAAAGACAGTGGCGCACAAGTCTTTATACTGGGGACACCAAGCCCAAGTCCTGTTCACCGGC
TGGCCGGGTACCAACTCCGGCATGTACGCATTGGCGGTGATTTTCGTGTTCGTTCTGGCGGTGCTCGTGGAATGGCTTAATTCCTGCAACTTCATGAAGCAAAAGGCCGA
GAATGTGTGGATGGTGGTACTGCAGACGGCGATACACGCAGTACGTACGGGTTTAAGTTACATGGTGATGCTAGCCGTGATGTCGTTCAACGGCGGAATCTTCCTGGCTG
CGGTGGGCGGCCATGCTGTGGGCTTCGTTCTGTTCAAAAGGCGAGGCGAAGCAAAGATGGTCCAATAAGATTCTAACATGGGCCTACATAGTGGGCTTTCATTTGTAGTC
CCCCAAAACCCAATAACAAAGCCCATTCACCAACCACTTACAAACCTTTTCTTCCTTATTTTTCAATTCATATCAAACATTGTAATCGGGAGCGGATCTATAAAGGATCT
TTGAAGGAGTGGAAGTATGTGCCTCGACGTTTTATATATATATATATATTGATTTTCATTAAA
Protein sequenceShow/hide protein sequence
MALKTTSHHNLGALPPPSPETNPAEKTVAHKSLYWGHQAQVLFTGWPGTNSGMYALAVIFVFVLAVLVEWLNSCNFMKQKAENVWMVVLQTAIHAVRTGLSYMVMLAVMS
FNGGIFLAAVGGHAVGFVLFKRRGEAKMVQ