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Clc10G21285 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G21285
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr10:34534929..34541295
RNA-Seq ExpressionClc10G21285
SyntenyClc10G21285
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AFK47761.1 unknown [Medicago truncatula]1.8e-0958.82Show/hide
Query:  EEITGGG---TRKHHLALFAVKIGSESSQIEFGEKGTLQDGVDAMHSAELGFLNLVIQHASIAGSVHN
        E+IT GG      HHL LFA++I S+SSQ++F EK TL++ VDAM+SA+L FL LVIQH+SIA S H+
Subjt:  EEITGGG---TRKHHLALFAVKIGSESSQIEFGEKGTLQDGVDAMHSAELGFLNLVIQHASIAGSVHN
TrEMBL top hitse value%identityAlignment
A0A7N0VM80 Uncharacterized protein4.9e-0543.24Show/hide
Query:  IVRLLGEEITGG---GTRKHHLALFAVKIGSESSQIEFGEKGTLQDGV-----DAMHSAELGFLNLVIQHASIA
        IVRL+   + GG   G R++ L L  ++IGS+S QI FG++G+L++GV     DA+  A+LG LNL++ H S +
Subjt:  IVRLLGEEITGG---GTRKHHLALFAVKIGSESSQIEFGEKGTLQDGV-----DAMHSAELGFLNLVIQHASIA
I3T5G9 Uncharacterized protein8.6e-1058.82Show/hide
Query:  EEITGGG---TRKHHLALFAVKIGSESSQIEFGEKGTLQDGVDAMHSAELGFLNLVIQHASIAGSVHN
        E+IT GG      HHL LFA++I S+SSQ++F EK TL++ VDAM+SA+L FL LVIQH+SIA S H+
Subjt:  EEITGGG---TRKHHLALFAVKIGSESSQIEFGEKGTLQDGVDAMHSAELGFLNLVIQHASIAGSVHN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGTATCAGTCAAGCCACTGATAACTGAGATCAGCCACAAGCAAGCAGCTACTTTGAAGAACAATCTGGGGTCTTTTCCCATGGCTATATCTTGTGAAACA
GACAGCAAAGTATTCACACGGGAACGAATGAAAGATGCAGCTTCGTTTACCATATCTTCTGAGAGATGCAACTCAGGAAGAGGCGGTGCTGGTCTGTTCAGGAAG
AAAGGTAGCAGATTCAGAAGTAACCTTAATCCAAACACGTCTTATAACAGACAAGTCAAGAGGCAATCTCCGATTAGTTACCTATTGAGAATGGAAGCAGATTTG
GCCCACAGAAAGATAATGGTAACAAGAAGAACAAGAGAATTCATGGATCCTAGAACTCTAACAGCTGCAGTGAAAAGCAGAATCCACATAGAACTTTCATCAATC
CAAGAATACATTGCATTAGCGATGCAGAAAAGAAGAAAACAACCACTGATCTTGACATACCAATACCGCCGCCAACAATTTCGTGAAGAGTTCGCTGTCTACAAA
ATAAACGATCCGAGGAACCCATCAAAAGAAACCATAGATTCATTATTGGGGTTGGCAGCTTTGGCGGTGGAAACAGCATGTAAATCTTGGGGGGTAGCAGCAGCA
TCGGGGGAAAGTGCACATACATCCTGGGAGGAGGAAGCTTCAGGGGAAACAAAAGGTAAATCTTGGAGAGTGTCAGCTTTTGGAGAAACTGCAGGAACATCTTGG
AGGGTGGAAGCTTTCCGGGAAACTACGGGTACATCTTCAGTCTTGGCAGTTTCAAGGGAAACAACAGGTATATTCTTGGGGGAGGCAGCTTGGGTGGAGGAAACT
GCAGGTTCGTTTTGTGGGTTAGCAACTCCTGCTGCCATGACTGCTGAGGAATCCATAAGGCTAGCAGCTATTGCAGCCTTCAAGTCCTCATCCTCCATGTCTATT
AGCATTTCTGTTTCTCCAGATGAAAGAAATGATCAATCTGCGCAGGTTCAGCAACTGAATTTCACATTTGAAGCAGAGCATGCAGCAAGAAACGCAAATCACTTG
AAGGAAACACAGCAAACTTGCACTATATTATCAAAAGGAGAAGAAAGAAACCTGGATGCTAAAATCACCGTCCAGGGAGACATTGTGAGACTCCTCGGAGAGGAA
ATCACCGGTGGTGGAACCAGAAAGCATCATCTGGCGCTCTTTGCGGTCAAGATCGGAAGCGAGAGCAGCCAAATCGAATTCGGAGAAAAAGGGACCTTGCAAGAC
GGTGTTGACGCAATGCACAGCGCAGAGCTTGGATTCTTGAACCTCGTGATACAACATGCCTCCATTGCAGGCTCCGTCCATAATCAGAGGCTGTTGAGAGAAAAG
GGAGAAACAAAAACCCTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGTATCAGTCAAGCCACTGATAACTGAGATCAGCCACAAGCAAGCAGCTACTTTGAAGAACAATCTGGGGTCTTTTCCCATGGCTATATCTTGTGAAACA
GACAGCAAAGTATTCACACGGGAACGAATGAAAGATGCAGCTTCGTTTACCATATCTTCTGAGAGATGCAACTCAGGAAGAGGCGGTGCTGGTCTGTTCAGGAAG
AAAGGTAGCAGATTCAGAAGTAACCTTAATCCAAACACGTCTTATAACAGACAAGTCAAGAGGCAATCTCCGATTAGTTACCTATTGAGAATGGAAGCAGATTTG
GCCCACAGAAAGATAATGGTAACAAGAAGAACAAGAGAATTCATGGATCCTAGAACTCTAACAGCTGCAGTGAAAAGCAGAATCCACATAGAACTTTCATCAATC
CAAGAATACATTGCATTAGCGATGCAGAAAAGAAGAAAACAACCACTGATCTTGACATACCAATACCGCCGCCAACAATTTCGTGAAGAGTTCGCTGTCTACAAA
ATAAACGATCCGAGGAACCCATCAAAAGAAACCATAGATTCATTATTGGGGTTGGCAGCTTTGGCGGTGGAAACAGCATGTAAATCTTGGGGGGTAGCAGCAGCA
TCGGGGGAAAGTGCACATACATCCTGGGAGGAGGAAGCTTCAGGGGAAACAAAAGGTAAATCTTGGAGAGTGTCAGCTTTTGGAGAAACTGCAGGAACATCTTGG
AGGGTGGAAGCTTTCCGGGAAACTACGGGTACATCTTCAGTCTTGGCAGTTTCAAGGGAAACAACAGGTATATTCTTGGGGGAGGCAGCTTGGGTGGAGGAAACT
GCAGGTTCGTTTTGTGGGTTAGCAACTCCTGCTGCCATGACTGCTGAGGAATCCATAAGGCTAGCAGCTATTGCAGCCTTCAAGTCCTCATCCTCCATGTCTATT
AGCATTTCTGTTTCTCCAGATGAAAGAAATGATCAATCTGCGCAGGTTCAGCAACTGAATTTCACATTTGAAGCAGAGCATGCAGCAAGAAACGCAAATCACTTG
AAGGAAACACAGCAAACTTGCACTATATTATCAAAAGGAGAAGAAAGAAACCTGGATGCTAAAATCACCGTCCAGGGAGACATTGTGAGACTCCTCGGAGAGGAA
ATCACCGGTGGTGGAACCAGAAAGCATCATCTGGCGCTCTTTGCGGTCAAGATCGGAAGCGAGAGCAGCCAAATCGAATTCGGAGAAAAAGGGACCTTGCAAGAC
GGTGTTGACGCAATGCACAGCGCAGAGCTTGGATTCTTGAACCTCGTGATACAACATGCCTCCATTGCAGGCTCCGTCCATAATCAGAGGCTGTTGAGAGAAAAG
GGAGAAACAAAAACCCTAAATTAG
Protein sequenceShow/hide protein sequence
MSVSVKPLITEISHKQAATLKNNLGSFPMAISCETDSKVFTRERMKDAASFTISSERCNSGRGGAGLFRKKGSRFRSNLNPNTSYNRQVKRQSPISYLLRMEADL
AHRKIMVTRRTREFMDPRTLTAAVKSRIHIELSSIQEYIALAMQKRRKQPLILTYQYRRQQFREEFAVYKINDPRNPSKETIDSLLGLAALAVETACKSWGVAAA
SGESAHTSWEEEASGETKGKSWRVSAFGETAGTSWRVEAFRETTGTSSVLAVSRETTGIFLGEAAWVEETAGSFCGLATPAAMTAEESIRLAAIAAFKSSSSMSI
SISVSPDERNDQSAQVQQLNFTFEAEHAARNANHLKETQQTCTILSKGEERNLDAKITVQGDIVRLLGEEITGGGTRKHHLALFAVKIGSESSQIEFGEKGTLQD
GVDAMHSAELGFLNLVIQHASIAGSVHNQRLLREKGETKTLN