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Clc10G22100 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc10G22100
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTPRXL protein
Genome locationClcChr10:35140565..35141203
RNA-Seq ExpressionClc10G22100
SyntenyClc10G22100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV66313.1 hypothetical protein CFOL_v3_09823 [Cephalotus follicularis]1.2e-3245.54Show/hide
Query:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT
        PRKPM+RRSH+R V + +V+NMAEARR+IA AL LHRSS SSS ++ +S    S              +C F     P    SQH CYS++ESMP+P+P 
Subjt:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT

Query:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI
        WSTTAPS   +P  PME  E F WG+ QA SY WWLGFL+ LD  +  +++  N  +         + +Q Q+G +  EA  L  SDH S  DEWL+ P 
Subjt:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI

Query:  GE
         E
Subjt:  GE

GAV80845.1 hypothetical protein CFOL_v3_24305 [Cephalotus follicularis]6.8e-3345.05Show/hide
Query:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT
        PRKPM+RRSH+R V + +V+NMAEARR+IA AL LHRSS SS  S +++    S              +C F     P    SQH CYS++ESMP+P+P 
Subjt:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT

Query:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI
        WSTTAPS   +P  PME  E F WG+ QA SY WWLGFL+ LD  +  +++  N  +         + +Q Q+G +  EA  L  SDH S  DEWL+ P 
Subjt:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI

Query:  GE
         E
Subjt:  GE

KAA0044211.1 TPRXL protein [Cucumis melo var. makuwa]2.6e-9390.48Show/hide
Query:  EAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAPSVLRSPVAPMEEQEIFEWGDGQA
        EAV+NMAEARRQIA+ALQLHRSSLSS+F TTTSM EPSGCYV +FEKKPI SGSQHFCYSI+ESMPVPQPTWSTT PSV+RSPVAPMEEQEIFEWGDGQA
Subjt:  EAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAPSVLRSPVAPMEEQEIFEWGDGQA

Query:  SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN
        SYAWWLGFLKALDVNSSN+ EY+NA  G+AVGMSSMVLTQCQDGLESGEALFLEASDHTS ADEWLIIPIGEDGGFIDNNCLGNDLASN
Subjt:  SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN

KAG6580440.1 hypothetical protein SDJN03_20442, partial [Cucurbita argyrosperma subsp. sororia]6.7e-9789.55Show/hide
Query:  MKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAPSVLRSPVAPME
        MKRRSHTRK+PRE+VV MAEARRQIAQALQLHRSS++SSFSTT SM EP GC   +FEKK +FSGSQHFCYSILESMPVPQPTWSTTAPSVLRSP APME
Subjt:  MKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAPSVLRSPVAPME

Query:  EQEIFEWGDGQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLAS
        EQEIFEWGDGQASYAWWLGFLKALDV+SSND EY NAG+GNAVGMSSMVLTQCQDGLESGEALFLEASD+TSF DEWLIIPIGEDGGFIDNNCLGNDLAS
Subjt:  EQEIFEWGDGQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLAS

Query:  N
        N
Subjt:  N

KGN58710.1 hypothetical protein Csa_002623 [Cucumis sativus]2.3e-10591.04Show/hide
Query:  MSQRTGFPRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAP
        MSQRT FPRKP KRRSHTRKVP EAV+NMAEARRQIA+ALQLHRSSLSSS STTTSM EPSGCYV +FEKKPI SGSQHFCYSI+ESMPVPQPTWSTT P
Subjt:  MSQRTGFPRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAP

Query:  SVLRSPVAPMEEQEIFEWGDGQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFI
        SV+RSPVAPMEEQEIFEWGDGQASYAWWLGFLKALDVN SND EY+NAGSG+AVGMSSMVLT+CQDGLESGEALFLEASDHTS ADEWLIIPIGEDGGFI
Subjt:  SVLRSPVAPMEEQEIFEWGDGQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFI

Query:  DNNCLGNDLASN
        DNNCLGNDLASN
Subjt:  DNNCLGNDLASN

TrEMBL top hitse value%identityAlignment
A0A0A0L9R9 Uncharacterized protein1.1e-10591.04Show/hide
Query:  MSQRTGFPRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAP
        MSQRT FPRKP KRRSHTRKVP EAV+NMAEARRQIA+ALQLHRSSLSSS STTTSM EPSGCYV +FEKKPI SGSQHFCYSI+ESMPVPQPTWSTT P
Subjt:  MSQRTGFPRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAP

Query:  SVLRSPVAPMEEQEIFEWGDGQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFI
        SV+RSPVAPMEEQEIFEWGDGQASYAWWLGFLKALDVN SND EY+NAGSG+AVGMSSMVLT+CQDGLESGEALFLEASDHTS ADEWLIIPIGEDGGFI
Subjt:  SVLRSPVAPMEEQEIFEWGDGQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFI

Query:  DNNCLGNDLASN
        DNNCLGNDLASN
Subjt:  DNNCLGNDLASN

A0A1Q3BEU6 Uncharacterized protein5.7e-3345.54Show/hide
Query:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT
        PRKPM+RRSH+R V + +V+NMAEARR+IA AL LHRSS SSS ++ +S    S              +C F     P    SQH CYS++ESMP+P+P 
Subjt:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT

Query:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI
        WSTTAPS   +P  PME  E F WG+ QA SY WWLGFL+ LD  +  +++  N  +         + +Q Q+G +  EA  L  SDH S  DEWL+ P 
Subjt:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI

Query:  GE
         E
Subjt:  GE

A0A1Q3CKX2 Uncharacterized protein3.3e-3345.05Show/hide
Query:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT
        PRKPM+RRSH+R V + +V+NMAEARR+IA AL LHRSS SS  S +++    S              +C F     P    SQH CYS++ESMP+P+P 
Subjt:  PRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGC-----------YVCEF--EKKPIFSGSQHFCYSILESMPVPQPT

Query:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI
        WSTTAPS   +P  PME  E F WG+ QA SY WWLGFL+ LD  +  +++  N  +         + +Q Q+G +  EA  L  SDH S  DEWL+ P 
Subjt:  WSTTAPSVLRSPVAPMEEQEIFEWGDGQA-SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPI

Query:  GE
         E
Subjt:  GE

A0A2N9G9P4 Uncharacterized protein1.8e-3145.18Show/hide
Query:  RRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILES--MPVPQPTWSTTAPSVLRSPVAP--
        RR HTRK  ++ V+NM +ARR+IA ALQLHRSS SS+ +TTT     +  ++     +P F+G+Q +CYS++ES  MP+P+P WSTTAPS+L +P  P  
Subjt:  RRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILES--MPVPQPTWSTTAPSVLRSPVAP--

Query:  --MEEQEIFEWGD-GQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN
          ME  E FEWG+  QAS+ WWLGFL+ LD   + + +Y        +G S +V +  Q+  + GE  F++ SD + F DEWLI P  ED G + N+
Subjt:  --MEEQEIFEWGD-GQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNN

A0A5A7TRK0 TPRXL protein1.3e-9390.48Show/hide
Query:  EAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAPSVLRSPVAPMEEQEIFEWGDGQA
        EAV+NMAEARRQIA+ALQLHRSSLSS+F TTTSM EPSGCYV +FEKKPI SGSQHFCYSI+ESMPVPQPTWSTT PSV+RSPVAPMEEQEIFEWGDGQA
Subjt:  EAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAPSVLRSPVAPMEEQEIFEWGDGQA

Query:  SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN
        SYAWWLGFLKALDVNSSN+ EY+NA  G+AVGMSSMVLTQCQDGLESGEALFLEASDHTS ADEWLIIPIGEDGGFIDNNCLGNDLASN
Subjt:  SYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCAGAGAACAGGGTTTCCCCGAAAGCCTATGAAAAGAAGGTCTCACACTAGAAAGGTCCCAAGGGAAGCTGTAGTCAATATGGCGGAGGCTAGAAGACAGATAGC
TCAAGCTTTGCAACTTCACAGATCGTCGTTGTCGTCTTCGTTTTCGACGACGACGTCTATGCCTGAACCTAGTGGCTGCTATGTCTGTGAGTTCGAGAAAAAACCCATAT
TTTCAGGTTCGCAGCATTTTTGCTATTCGATATTGGAGTCTATGCCAGTTCCTCAACCGACTTGGTCAACCACAGCACCTTCTGTGCTGCGGTCGCCGGTGGCGCCAATG
GAAGAGCAGGAAATATTTGAGTGGGGAGATGGGCAAGCTTCTTACGCTTGGTGGCTTGGATTTTTGAAGGCTTTGGATGTTAATAGCAGCAACGACATAGAGTATCAAAA
TGCAGGGAGTGGAAATGCGGTGGGGATGAGTTCAATGGTGTTGACTCAGTGTCAGGATGGCTTGGAAAGTGGAGAAGCACTGTTTCTGGAAGCGAGTGACCACACCTCGT
TTGCAGATGAATGGTTGATAATTCCAATTGGAGAAGACGGGGGGTTTATTGATAACAATTGCCTTGGGAATGATTTGGCATCTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCAGAGAACAGGGTTTCCCCGAAAGCCTATGAAAAGAAGGTCTCACACTAGAAAGGTCCCAAGGGAAGCTGTAGTCAATATGGCGGAGGCTAGAAGACAGATAGC
TCAAGCTTTGCAACTTCACAGATCGTCGTTGTCGTCTTCGTTTTCGACGACGACGTCTATGCCTGAACCTAGTGGCTGCTATGTCTGTGAGTTCGAGAAAAAACCCATAT
TTTCAGGTTCGCAGCATTTTTGCTATTCGATATTGGAGTCTATGCCAGTTCCTCAACCGACTTGGTCAACCACAGCACCTTCTGTGCTGCGGTCGCCGGTGGCGCCAATG
GAAGAGCAGGAAATATTTGAGTGGGGAGATGGGCAAGCTTCTTACGCTTGGTGGCTTGGATTTTTGAAGGCTTTGGATGTTAATAGCAGCAACGACATAGAGTATCAAAA
TGCAGGGAGTGGAAATGCGGTGGGGATGAGTTCAATGGTGTTGACTCAGTGTCAGGATGGCTTGGAAAGTGGAGAAGCACTGTTTCTGGAAGCGAGTGACCACACCTCGT
TTGCAGATGAATGGTTGATAATTCCAATTGGAGAAGACGGGGGGTTTATTGATAACAATTGCCTTGGGAATGATTTGGCATCTAACTAA
Protein sequenceShow/hide protein sequence
MSQRTGFPRKPMKRRSHTRKVPREAVVNMAEARRQIAQALQLHRSSLSSSFSTTTSMPEPSGCYVCEFEKKPIFSGSQHFCYSILESMPVPQPTWSTTAPSVLRSPVAPM
EEQEIFEWGDGQASYAWWLGFLKALDVNSSNDIEYQNAGSGNAVGMSSMVLTQCQDGLESGEALFLEASDHTSFADEWLIIPIGEDGGFIDNNCLGNDLASN