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Clc11G00100 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G00100
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:118619..127246
RNA-Seq ExpressionClc11G00100
SyntenyClc11G00100
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB8108746.1 hypothetical protein EE612_044659 [Oryza sativa]3.3e-0860.61Show/hide
Query:  TQGTTDLAAVERSQVRVLRQTGRRIKAMLSFRVSAAPFAVGRQYPIMSNAAL-----NFHVNRAAI
        ++GT   A  ERS V VLRQTGRR  AMLS  VSAAPFAVGRQYPI  NA +     NFH N  A+
Subjt:  TQGTTDLAAVERSQVRVLRQTGRRIKAMLSFRVSAAPFAVGRQYPIMSNAAL-----NFHVNRAAI

KGN51411.1 hypothetical protein Csa_007923 [Cucumis sativus]3.1e-0672.92Show/hide
Query:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC
        MKSG+SSSSVEALRN GEGIAS+LSS DHSR LL+TRPPR  +    C
Subjt:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC

XP_022956291.1 uncharacterized protein LOC111458016 [Cucurbita moschata]3.8e-0472.92Show/hide
Query:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC
        MKS    SSVEALRN GEGIASALSSSD SRLLL+TRPPR  +  L C
Subjt:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC

XP_023540347.1 uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo]3.8e-0472.92Show/hide
Query:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC
        MKS    SSVEALRN GEGIASALSSSD SRLLL+TRPPR  +  L C
Subjt:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC

XP_038893067.1 uncharacterized protein LOC120081950 [Benincasa hispida]1.8e-0677.08Show/hide
Query:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC
        MKSGVSSSSVE LRN GEGIASALSSSD SRLLL+TRPPR  +    C
Subjt:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC

TrEMBL top hitse value%identityAlignment
A0A0A0KUK2 Uncharacterized protein1.5e-0672.92Show/hide
Query:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC
        MKSG+SSSSVEALRN GEGIAS+LSS DHSR LL+TRPPR  +    C
Subjt:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC

A0A0P0XGN3 Os08g0453716 protein1.6e-0860.61Show/hide
Query:  TQGTTDLAAVERSQVRVLRQTGRRIKAMLSFRVSAAPFAVGRQYPIMSNAAL-----NFHVNRAAI
        ++GT   A  ERS V VLRQTGRR  AMLS  VSAAPFAVGRQYPI  NA +     NFH N  A+
Subjt:  TQGTTDLAAVERSQVRVLRQTGRRIKAMLSFRVSAAPFAVGRQYPIMSNAAL-----NFHVNRAAI

A0A6J1GW53 uncharacterized protein LOC1114580161.8e-0472.92Show/hide
Query:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC
        MKS    SSVEALRN GEGIASALSSSD SRLLL+TRPPR  +  L C
Subjt:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC

A0A6J1I9S5 uncharacterized protein LOC1114728857.0e-0470.83Show/hide
Query:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC
        MKS    SSVEALR+ GEGIASALSSSD SRLLL+TRPPR  +  L C
Subjt:  MKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAGAAATGAAATCAGGGGTTTCATCTTCTTCAGTTGAAGCTTTGAGGAACGGAGGAGAAGGAATCGCCTCCGCCTTATCTTCTTCCGATCACTCTCGTTTGTT
GCTTTCCACTCGACCTCCCAGGTACTTCCTTCTCTCTCTTCTCTGCCTTCATTCTCTTTGGCTAGAATCTTCTTCATACGCCTTGATCGTTGTTAGGGCTGAATTCACTC
CCTTCTGCCGCGTCGAGTTTTTCATTAAAGAAAAAAGGGACATCTTAGTGAAATGGCCTAGTAAGGAGAGAGTCAGGGAAGAAATGGAAAGCCAAAGCGCACTATTGGCT
CAAACATTGGCCATCCGCTTCAGCAGGAGACTCACCAATGACAATTGCAAATTTTGCACATCATTTTCGTTTGTTTATTATCTCATTGGTTCTAGAGTTGTTGAGAAGAT
CCTTGAGGATACTAACAAAGGGGGTGGCTCCAATTCCAAGTCCAACAAGGAGAAGCACATCGTAGTTTTCGTAGTCCTGTGCAGGTGCTCCATACGGCCCGTCAACCAGC
AATCTCGGCTGACTGAACAAACCATCAAAAGGTTTGGAGTTGACATGGTCAGTGAAGACACGTTTGAGTTCTCTTGTCCAATCCCCCACGGTCCTAATATGCACACTCAG
GCTCTGAGGCTCCTCTCCCCAAGATACAGCAGCAAAGGAAAAGACACGTACACCCAAGGGACGACCGATCTCGCTGCAGTAGAACGCAGCCAAGTGAGAGTGTTGCGGCA
GACAGGGAGGAGGATTAAGGCCATGTTGAGCTTTAGAGTCTCGGCAGCGCCTTTCGCTGTCGGGAGGCAGTACCCCATTATGTCAAATGCTGCTTTGAATTTCCATGTGA
ACAGAGCTGCCATTGTTGATCCCCAAAGGAAAAGAATCCAAATTCTTTGCCAGTTTTGGAATATTAGAGAGTGGAGTGTTGTGGTTGCTGTTTTGATGATGTTTTTGGGG
TTGAATAAGCTTAGATTTTGGCTCCATCCTACACTTGTTGCTGTGCTTAAGGGTCTGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAGAAATGAAATCAGGGGTTTCATCTTCTTCAGTTGAAGCTTTGAGGAACGGAGGAGAAGGAATCGCCTCCGCCTTATCTTCTTCCGATCACTCTCGTTTGTT
GCTTTCCACTCGACCTCCCAGGTACTTCCTTCTCTCTCTTCTCTGCCTTCATTCTCTTTGGCTAGAATCTTCTTCATACGCCTTGATCGTTGTTAGGGCTGAATTCACTC
CCTTCTGCCGCGTCGAGTTTTTCATTAAAGAAAAAAGGGACATCTTAGTGAAATGGCCTAGTAAGGAGAGAGTCAGGGAAGAAATGGAAAGCCAAAGCGCACTATTGGCT
CAAACATTGGCCATCCGCTTCAGCAGGAGACTCACCAATGACAATTGCAAATTTTGCACATCATTTTCGTTTGTTTATTATCTCATTGGTTCTAGAGTTGTTGAGAAGAT
CCTTGAGGATACTAACAAAGGGGGTGGCTCCAATTCCAAGTCCAACAAGGAGAAGCACATCGTAGTTTTCGTAGTCCTGTGCAGGTGCTCCATACGGCCCGTCAACCAGC
AATCTCGGCTGACTGAACAAACCATCAAAAGGTTTGGAGTTGACATGGTCAGTGAAGACACGTTTGAGTTCTCTTGTCCAATCCCCCACGGTCCTAATATGCACACTCAG
GCTCTGAGGCTCCTCTCCCCAAGATACAGCAGCAAAGGAAAAGACACGTACACCCAAGGGACGACCGATCTCGCTGCAGTAGAACGCAGCCAAGTGAGAGTGTTGCGGCA
GACAGGGAGGAGGATTAAGGCCATGTTGAGCTTTAGAGTCTCGGCAGCGCCTTTCGCTGTCGGGAGGCAGTACCCCATTATGTCAAATGCTGCTTTGAATTTCCATGTGA
ACAGAGCTGCCATTGTTGATCCCCAAAGGAAAAGAATCCAAATTCTTTGCCAGTTTTGGAATATTAGAGAGTGGAGTGTTGTGGTTGCTGTTTTGATGATGTTTTTGGGG
TTGAATAAGCTTAGATTTTGGCTCCATCCTACACTTGTTGCTGTGCTTAAGGGTCTGCTGTAA
Protein sequenceShow/hide protein sequence
MDAEMKSGVSSSSVEALRNGGEGIASALSSSDHSRLLLSTRPPRYFLLSLLCLHSLWLESSSYALIVVRAEFTPFCRVEFFIKEKRDILVKWPSKERVREEMESQSALLA
QTLAIRFSRRLTNDNCKFCTSFSFVYYLIGSRVVEKILEDTNKGGGSNSKSNKEKHIVVFVVLCRCSIRPVNQQSRLTEQTIKRFGVDMVSEDTFEFSCPIPHGPNMHTQ
ALRLLSPRYSSKGKDTYTQGTTDLAAVERSQVRVLRQTGRRIKAMLSFRVSAAPFAVGRQYPIMSNAALNFHVNRAAIVDPQRKRIQILCQFWNIREWSVVVAVLMMFLG
LNKLRFWLHPTLVAVLKGLL