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Clc11G00450 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G00450
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncalmodulin-like
Genome locationClcChr11:520485..521150
RNA-Seq ExpressionClc11G00450
SyntenyClc11G00450
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065465.1 putative calcium-binding protein CML11 [Cucumis melo var. makuwa]1.6e-5669.77Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        MYI +LQASM MYEA  FI+ YEK+GD VQVK FNDV R STQI  Q +V KILKS+DD   KLS   HI+PT+Q GGK K S  R L +KSSNM FSR+
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        ++KEIF+YHD NNDGFL+  ELTKAFAFLGS+FPFYKACYGM+YAD N DGLISE ELDKLIDYA++ I+KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

KAE8648233.1 hypothetical protein Csa_018371 [Cucumis sativus]1.2e-5171.79Show/hide
Query:  MVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYH
        M MYEAS  I++YEKNGD V+VKAF+DV R STQI N+E V KILK +D    KL S  HI+PT++ GGK K S TRVL  KSSNM  SRE +KEIFQYH
Subjt:  MVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYH

Query:  DVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYA
        D NNDGFL+R ELTKAFAFLGS+FPFYKACYGM+YAD N+DGLISE ELDKLIDYA
Subjt:  DVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYA

XP_022930007.1 uncharacterized protein LOC111436449 [Cucurbita moschata]4.8e-4559.3Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        M+I +LQASM  YEAS+ I++Y +NGD VQ+K+F+D+AR STQ+NNQ  + +ILK N +  LKLSSN H                     K+S +QFSRE
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        +MKEIF+YHD + DGFL+ RELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKLIDYA +F++KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

XP_022930012.1 calmodulin-2/4-like [Cucurbita moschata]2.0e-4660.47Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        M+IP+LQASM  YEAS+ I++  +NGD VQ+KAFN +AR STQ+NNQ MV +IL+ N +   K SSN H+                    K+SNMQFSRE
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        +MKEIF+YHD + DGFL+ RELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKL+DYA +FI+KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

XP_023530739.1 calmodulin-2/4-like [Cucurbita pepo subsp. pepo]9.8e-4659.88Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        M+IP+LQASM  YEAS+ I++  +NGD VQ+KAFN +AR STQ+NNQ MV +IL+ N +   K SSN H+                    K+SNMQFSRE
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        +MKEIF+YHD + DGFL+ RELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKL+DYA +F++KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

TrEMBL top hitse value%identityAlignment
A0A0A0KLF3 Uncharacterized protein2.9e-5164.16Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQIN-NQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSR
        M+IPQLQ S   YEASK +++YE+NG+GV + AFND ARGSTQIN N+EM +K LK NDD   KLSSN  +K   QI GKA++   RV   K+SNMQFSR
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQIN-NQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSR

Query:  EEMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        E++KEIFQY+D + DGFL+ RE+TKAFA LGSIFPF KA +GM+YAD NKDGLI E ELDKLI+YA++F++KK
Subjt:  EEMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

A0A0A0KMQ1 Uncharacterized protein4.1e-5871.51Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        MYI +LQASM MYEAS  I++YEKNGD V+VKAF+DV R STQI N+E V KILK +D    KL S  HI+PT++ GGK K S TRVL  KSSNM  SRE
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
         +KEIFQYHD NNDGFL+R ELTKAFAFLGS+FPFYKACYGM+YAD N+DGLISE ELDKLIDYAS+ I+KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

A0A5A7VI66 Putative calcium-binding protein CML117.8e-5769.77Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        MYI +LQASM MYEA  FI+ YEK+GD VQVK FNDV R STQI  Q +V KILKS+DD   KLS   HI+PT+Q GGK K S  R L +KSSNM FSR+
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        ++KEIF+YHD NNDGFL+  ELTKAFAFLGS+FPFYKACYGM+YAD N DGLISE ELDKLIDYA++ I+KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

A0A6J1EP67 uncharacterized protein LOC1114364492.3e-4559.3Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        M+I +LQASM  YEAS+ I++Y +NGD VQ+K+F+D+AR STQ+NNQ  + +ILK N +  LKLSSN H                     K+S +QFSRE
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        +MKEIF+YHD + DGFL+ RELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKLIDYA +F++KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

A0A6J1EP72 calmodulin-2/4-like9.5e-4760.47Show/hide
Query:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE
        M+IP+LQASM  YEAS+ I++  +NGD VQ+KAFN +AR STQ+NNQ MV +IL+ N +   K SSN H+                    K+SNMQFSRE
Subjt:  MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSRE

Query:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK
        +MKEIF+YHD + DGFL+ RELTKAFAFLGSI PF KA YGM YAD NKDGLISE ELDKL+DYA +FI+KK
Subjt:  EMKEIFQYHDVNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATATCCCCCAACTTCAAGCTTCCATGGTTATGTATGAAGCAAGTAAGTTTATCGAGGAGTATGAAAAAAATGGTGATGGTGTTCAAGTAAAAGCTTTCAATGACGT
TGCTCGAGGTTCAACTCAAATCAATAATCAAGAAATGGTATCGAAAATCCTAAAATCGAACGATGATGATATACTCAAGCTTAGTTCAAATGATCATATAAAGCCAACTA
AGCAAATAGGAGGAAAAGCTAAAATATCCACCACAAGGGTTCTTGGCGTAAAGTCGTCTAATATGCAATTTAGTCGAGAGGAGATGAAGGAAATTTTTCAATATCATGAC
GTCAACAATGATGGTTTCCTCGATAGAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTTTTCCATTCTACAAAGCTTGCTACGGAATGTTGTATGCCGATAT
TAATAAAGATGGTCTTATCAGTGAGATTGAGCTTGACAAACTCATTGATTATGCAAGTAGATTTATCGAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
TTAAAAACAAATACAACATTAGTGTATAACTATGTATATCCCCCAACTTCAAGCTTCCATGGTTATGTATGAAGCAAGTAAGTTTATCGAGGAGTATGAAAAAAATGGTG
ATGGTGTTCAAGTAAAAGCTTTCAATGACGTTGCTCGAGGTTCAACTCAAATCAATAATCAAGAAATGGTATCGAAAATCCTAAAATCGAACGATGATGATATACTCAAG
CTTAGTTCAAATGATCATATAAAGCCAACTAAGCAAATAGGAGGAAAAGCTAAAATATCCACCACAAGGGTTCTTGGCGTAAAGTCGTCTAATATGCAATTTAGTCGAGA
GGAGATGAAGGAAATTTTTCAATATCATGACGTCAACAATGATGGTTTCCTCGATAGAAGGGAGCTAACAAAAGCTTTTGCTTTTCTAGGCTCAATTTTTCCATTCTACA
AAGCTTGCTACGGAATGTTGTATGCCGATATTAATAAAGATGGTCTTATCAGTGAGATTGAGCTTGACAAACTCATTGATTATGCAAGTAGATTTATCGAGAAGAAATAA
GCTGTTAAGCTACTTTCGTTGTACGGTAATTTGAAATTTGAAGTCTAACCTTTGAAATAATAATTTAAACATATATGATTGTTTGAAATAAAGAATTTATCAACTTGTTT
TTACTT
Protein sequenceShow/hide protein sequence
MYIPQLQASMVMYEASKFIEEYEKNGDGVQVKAFNDVARGSTQINNQEMVSKILKSNDDDILKLSSNDHIKPTKQIGGKAKISTTRVLGVKSSNMQFSREEMKEIFQYHD
VNNDGFLDRRELTKAFAFLGSIFPFYKACYGMLYADINKDGLISEIELDKLIDYASRFIEKK