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Clc11G00600 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G00600
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:684677..691524
RNA-Seq ExpressionClc11G00600
SyntenyClc11G00600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032450.1 hypothetical protein SDJN02_06498, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-1858.72Show/hide
Query:  FSS--KLYSQVIAIQISSLLQLPIPTDLRPD-------PSTYSASTLSLVERRRRVLLPREIFSAAASIGGDSTFC------DGSDDAFWHLDDFWRSRT
        FSS  KL+SQVIAIQI   LQL +P  LR         PSTY A T SLV+RRRRV LPR IFSA ASIGGD+           +   FW LDDFWR RT
Subjt:  FSS--KLYSQVIAIQISSLLQLPIPTDLRPD-------PSTYSASTLSLVERRRRVLLPREIFSAAASIGGDSTFC------DGSDDAFWHLDDFWRSRT

Query:  TRTHSNTIQ
        TRTH NTIQ
Subjt:  TRTHSNTIQ
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGACCCAACCTACTATGCCACTCTTACAGGATATCAGGAGAAAGGAAATCCCTTTTCTTCCAAGCTTTACTCTCAAGTAATCGCAATCCAAATCTCTTCTCTTTT
GCAACTTCCGATACCCACCGATCTCCGCCCTGACCCATCCACCTATTCCGCGTCAACTTTGTCCCTTGTGGAACGACGACGACGAGTTCTCCTCCCTCGGGAGATCTTCT
CCGCCGCTGCTTCTATCGGCGGCGATTCTACATTCTGCGACGGCAGCGACGATGCTTTTTGGCACCTCGATGACTTTTGGCGGTCACGCACAACCCGAACTCATTCCAAC
ACAATTCAACGAGGACCCCAATCCTTTTTGGTTCGGACTAGTTTTGGATTGATTGAACTTGGTTTAAGGAACCGTTGGAATAGCATAGGAGTGCTTTACAACGTCTGCTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGATGACCCAACCTACTATGCCACTCTTACAGGATATCAGGAGAAAGGAAATCCCTTTTCTTCCAAGCTTTACTCTCAAGTAATCGCAATCCAAATCTCTTCTCTTTT
GCAACTTCCGATACCCACCGATCTCCGCCCTGACCCATCCACCTATTCCGCGTCAACTTTGTCCCTTGTGGAACGACGACGACGAGTTCTCCTCCCTCGGGAGATCTTCT
CCGCCGCTGCTTCTATCGGCGGCGATTCTACATTCTGCGACGGCAGCGACGATGCTTTTTGGCACCTCGATGACTTTTGGCGGTCACGCACAACCCGAACTCATTCCAAC
ACAATTCAACGAGGACCCCAATCCTTTTTGGTTCGGACTAGTTTTGGATTGATTGAACTTGGTTTAAGGAACCGTTGGAATAGCATAGGAGTGCTTTACAACGTCTGCTA
A
Protein sequenceShow/hide protein sequence
MDDPTYYATLTGYQEKGNPFSSKLYSQVIAIQISSLLQLPIPTDLRPDPSTYSASTLSLVERRRRVLLPREIFSAAASIGGDSTFCDGSDDAFWHLDDFWRSRTTRTHSN
TIQRGPQSFLVRTSFGLIELGLRNRWNSIGVLYNVC