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Clc11G00660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G00660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCytochrome c
Genome locationClcChr11:727986..730886
RNA-Seq ExpressionClc11G00660
SyntenyClc11G00660
Gene Ontology termsGO:0006122 - mitochondrial electron transport, ubiquinol to cytochrome c (biological process)
GO:0006123 - mitochondrial electron transport, cytochrome c to oxygen (biological process)
GO:0010336 - gibberellic acid homeostasis (biological process)
GO:0005758 - mitochondrial intermembrane space (cellular component)
GO:0070469 - respirasome (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR002327 - Cytochrome c, class IA/ IB
IPR009056 - Cytochrome c-like domain
IPR036909 - Cytochrome c-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8709901.1 Cytochrome c [Hibiscus syriacus]1.2e-5484.85Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASF+EAPPGN+KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKN AVIWEE TLYDYLLNPKK       LPL        
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
        L+YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

MBA0775650.1 hypothetical protein [Gossypium trilobum]1.2e-5482.09Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK-IEYNAQQLPL-VSEYAS
        MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK +      L      Y  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK-IEYNAQQLPL-VSEYAS

Query:  DNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
            YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  DNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

MBA0808559.1 hypothetical protein [Gossypium harknessii]2.0e-5479.71Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPL------VS
        MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK       +P+        
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPL------VS

Query:  EYASDNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
         Y      YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  EYASDNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

XP_022930036.1 cytochrome c [Cucurbita moschata]3.0e-5584.85Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK                  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
          YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

XP_038893188.1 cytochrome c [Benincasa hispida]8.8e-5584.09Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK                  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
          YIPGTKMVFPGLKKPQ+RADLIAYLKESTA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

TrEMBL top hitse value%identityAlignment
A0A6A3AZL4 Cytochrome c5.6e-5584.85Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASF+EAPPGN+KAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKN AVIWEE TLYDYLLNPKK       LPL        
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
        L+YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

A0A6J1EPS9 cytochrome c1.5e-5584.85Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK                  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
          YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

A0A6J1JWC5 cytochrome c1.5e-5584.85Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK                  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
          YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

A0A7J8Q3B1 Cytochrome c domain-containing protein9.5e-5582.09Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK-IEYNAQQLPL-VSEYAS
        MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK +      L      Y  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK-IEYNAQQLPL-VSEYAS

Query:  DNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
            YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  DNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

A0A7J9ERH3 Cytochrome c domain-containing protein5.6e-5582.09Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK-IEYNAQQLPL-VSEYAS
        MASF++APPGN+KAGEKIFKTKC+QCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK +      L      Y  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKK-IEYNAQQLPL-VSEYAS

Query:  DNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
            YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  DNLAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

SwissProt top hitse value%identityAlignment
P00051 Cytochrome c2.2e-5683.21Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKN AVIWEEKTLYDYLLNPKK                   
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL

Query:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA
         YIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Subjt:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA

P00052 Cytochrome c1.1e-5582.44Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL
        ASFDEAPPGNSK+GEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYS ANKNMAVIWEEKTLYDYLLNPKK                   
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL

Query:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA
         YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA

P62772 Cytochrome c1.2e-5481.68Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEKTLYDYLLNPKK                   
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL

Query:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA
         YIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Subjt:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA

P62773 Cytochrome c1.2e-5481.68Show/hide
Query:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL
        ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEKTLYDYLLNPKK                   
Subjt:  ASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNL

Query:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA
         YIPGTKMVFPGLKKPQDRADLIAYLKE+TA
Subjt:  AYIPGTKMVFPGLKKPQDRADLIAYLKESTA

Q9T0G2 Cytochrome c-27.0e-5580.3Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKK                  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
          YIPGTKMVFPGLKKPQDRADLIAYLKE TA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

Arabidopsis top hitse value%identityAlignment
AT1G22840.1 CYTOCHROME C-12.1e-5478.79Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEK LYDYLLNPKK                  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
          YIPGTKMVFPGLKKPQDRADLIAYLKESTA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA

AT1G22840.2 CYTOCHROME C-12.9e-4084.27Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQ
        MASFDEAPPGN+KAGEKIF+TKCAQCHTV+ GAGHKQGPNLNGLFGRQSGTT GYSYSAANKN AV WEEK LYDYLLNPKK+ +   Q
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQ

AT4G10040.1 cytochrome c-25.0e-5680.3Show/hide
Query:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN
        MASFDEAPPGN KAGEKIF+TKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTTPGYSYSAANK+MAV WEEKTLYDYLLNPKK                  
Subjt:  MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDN

Query:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA
          YIPGTKMVFPGLKKPQDRADLIAYLKE TA
Subjt:  LAYIPGTKMVFPGLKKPQDRADLIAYLKESTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGGGCTGGTCATAAGCA
AGGTCCCAATTTGAATGGGCTATTTGGACGGCAGTCTGGTACAACTCCTGGATACTCTTACTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACGTTGT
ATGATTACTTGCTTAACCCCAAGAAGATAGAATATAACGCACAGCAATTGCCTCTTGTATCTGAATATGCTTCAGACAATCTAGCTTACATTCCCGGAACAAAGATGGTT
TTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATCTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAAGGGGCTGGTCATAAGCA
AGGTCCCAATTTGAATGGGCTATTTGGACGGCAGTCTGGTACAACTCCTGGATACTCTTACTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACGTTGT
ATGATTACTTGCTTAACCCCAAGAAGATAGAATATAACGCACAGCAATTGCCTCTTGTATCTGAATATGCTTCAGACAATCTAGCTTACATTCCCGGAACAAAGATGGTT
TTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAATCAACTGCTTAA
Protein sequenceShow/hide protein sequence
MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTPGYSYSAANKNMAVIWEEKTLYDYLLNPKKIEYNAQQLPLVSEYASDNLAYIPGTKMV
FPGLKKPQDRADLIAYLKESTA