; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G01130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G01130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:1236953..1239125
RNA-Seq ExpressionClc11G01130
SyntenyClc11G01130
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140415.1 uncharacterized protein LOC101204044 [Cucumis sativus]2.4e-5189.66Show/hide
Query:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ
        ME+KV E+DKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLD EGT+HNGKRTPESWRKRTEVSREVK  AE RPVRKRHHRTLSRPD LM GMSPRP T 
Subjt:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ

Query:  NFTIFQMLQQLDKFES
        NFTIFQMLQQLDKFES
Subjt:  NFTIFQMLQQLDKFES
XP_008456876.1 PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo]4.1e-5188.79Show/hide
Query:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ
        ME+K  E+DKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLD EGT+HNGKRTPESWRKRTEVSREVK  AE RPVRKRHHRT++RPD LMAGMSPRPTT 
Subjt:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ

Query:  NFTIFQMLQQLDKFES
        NFTIFQMLQQLDKFES
Subjt:  NFTIFQMLQQLDKFES
XP_022942644.1 uncharacterized protein LOC111447618 [Cucurbita moschata]4.0e-4680.47Show/hide
Query:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA
        ++E  SGME +V+EVD MEFWPLQHP EPDDED PV+CPMPNS+S+LD EGTMHNGKR PESWRKRTEVSREVKA+AET  R VRKRHH TLSRPDHLM 
Subjt:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA

Query:  GMSP---RPTTQNFTIFQMLQQLDKFES
        GMSP    PTTQNFTIFQMLQQLDKFES
Subjt:  GMSP---RPTTQNFTIFQMLQQLDKFES
XP_023551192.1 uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo]1.5e-4579.69Show/hide
Query:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA
        ++E  SGME +V+EVD MEFWPLQHP EPDDED PV+CPMPNS+S+LD EGTMHNGKR PESWRKR EVSREVKA+AET  R VRKRHH TLSRPDHLM 
Subjt:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA

Query:  GMSP---RPTTQNFTIFQMLQQLDKFES
        GMSP    PTTQNFTIFQMLQQLDKFES
Subjt:  GMSP---RPTTQNFTIFQMLQQLDKFES
XP_038893029.1 uncharacterized protein LOC120081921 [Benincasa hispida]1.4e-4382.4Show/hide
Query:  MQSSILEKEEEEEEEEEEGIRESNKKKESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREV
        MQS ILEK       E+EG R  +KKKE ES   ME+KV+EVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLD EGTMHNGKRTPESWRKRTEVSRE+
Subjt:  MQSSILEKEEEEEEEEEEGIRESNKKKESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREV

Query:  KAAAETRPVRKRHHRTLSRPDHLMA
        KA AETRPVRKRHHRTLSRPDHLMA
Subjt:  KAAAETRPVRKRHHRTLSRPDHLMA
TrEMBL top hitse value%identityAlignment
A0A0A0KPE8 Uncharacterized protein1.2e-5189.66Show/hide
Query:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ
        ME+KV E+DKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLD EGT+HNGKRTPESWRKRTEVSREVK  AE RPVRKRHHRTLSRPD LM GMSPRP T 
Subjt:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ

Query:  NFTIFQMLQQLDKFES
        NFTIFQMLQQLDKFES
Subjt:  NFTIFQMLQQLDKFES
A0A1S3C3T8 uncharacterized protein LOC1034966892.0e-5188.79Show/hide
Query:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ
        ME+K  E+DKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLD EGT+HNGKRTPESWRKRTEVSREVK  AE RPVRKRHHRT++RPD LMAGMSPRPTT 
Subjt:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ

Query:  NFTIFQMLQQLDKFES
        NFTIFQMLQQLDKFES
Subjt:  NFTIFQMLQQLDKFES
A0A5A7SM67 Uncharacterized protein2.0e-5188.79Show/hide
Query:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ
        ME+K  E+DKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLD EGT+HNGKRTPESWRKRTEVSREVK  AE RPVRKRHHRT++RPD LMAGMSPRPTT 
Subjt:  MEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVRKRHHRTLSRPDHLMAGMSPRPTTQ

Query:  NFTIFQMLQQLDKFES
        NFTIFQMLQQLDKFES
Subjt:  NFTIFQMLQQLDKFES
A0A6J1FRX2 uncharacterized protein LOC1114476181.9e-4680.47Show/hide
Query:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA
        ++E  SGME +V+EVD MEFWPLQHP EPDDED PV+CPMPNS+S+LD EGTMHNGKR PESWRKRTEVSREVKA+AET  R VRKRHH TLSRPDHLM 
Subjt:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA

Query:  GMSP---RPTTQNFTIFQMLQQLDKFES
        GMSP    PTTQNFTIFQMLQQLDKFES
Subjt:  GMSP---RPTTQNFTIFQMLQQLDKFES
A0A6J1J9G4 uncharacterized protein LOC1114829321.9e-4680.47Show/hide
Query:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA
        ++E  SGME +V+EVD MEFWPLQHP EPDDED PV+CPMPNS+S+LD EGTMHNGKR PESWRKRTEVSREVKA+AET  R VRKRHH TLSRPDHLM 
Subjt:  ESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAET--RPVRKRHHRTLSRPDHLMA

Query:  GMSP---RPTTQNFTIFQMLQQLDKFES
        GMSP    PTTQNFTIFQMLQQLDKFES
Subjt:  GMSP---RPTTQNFTIFQMLQQLDKFES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G01913.1 unknown protein7.3e-0632.62Show/hide
Query:  ESNKKKESESESGMEMKVIEVDK--MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGK-RTPESWRKRTEVSREVKA----AAETRPVRKRHH
        +S  K+ES  E+ M     E ++  +EF P++HP+EP++ED PV CP+P S+SL+      H  K ++   W K    S E           R VRKRH+
Subjt:  ESNKKKESESESGMEMKVIEVDK--MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGK-RTPESWRKRTEVSREVKA----AAETRPVRKRHH

Query:  R--TLSRPDHLMAGMSPRPTT---QNFTIFQMLQQLDKFES
                +          TT    N T +++LQQ+ +FES
Subjt:  R--TLSRPDHLMAGMSPRPTT---QNFTIFQMLQQLDKFES

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTAGCATTTTAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAATTAGAGAAAGCAACAAGAAGAAGGAGAGTGAAAGTGAAAGTGGTATGGAAAT
GAAAGTTATTGAAGTTGACAAAATGGAGTTTTGGCCATTGCAACATCCTTTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTC
TTGATCATGAAGGAACAATGCATAACGGCAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGCAGCCGCGGAGACGAGGCCGGTGCGG
AAGCGGCACCACCGCACGCTCAGCCGTCCCGACCACCTGATGGCGGGAATGTCACCGCGGCCGACCACCCAGAATTTCACAATCTTCCAAATGCTCCAGCAATTGGACAA
ATTTGAGTCTTGGCAATCACACGCAAACTAA
mRNA sequenceShow/hide mRNA sequence
GTTTTTTGTTTTTTTGGCCTTCCATTCCCATATTGGATATTTCCATATCTCTCTCTCTCTCACACAGTATTCTTCTTTCTCAAGTTGTTGTTGTTGTTTAGTAGAGAGAA
ATAATATGCAAAGTAGCATTTTAGAAAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAATTAGAGAAAGCAACAAGAAGAAGGAGAGTGAAAGTGAAAGTGGTATG
GAAATGAAAGTTATTGAAGTTGACAAAATGGAGTTTTGGCCATTGCAACATCCTTTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTC
CCTTCTTGATCATGAAGGAACAATGCATAACGGCAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGCAGCCGCGGAGACGAGGCCGG
TGCGGAAGCGGCACCACCGCACGCTCAGCCGTCCCGACCACCTGATGGCGGGAATGTCACCGCGGCCGACCACCCAGAATTTCACAATCTTCCAAATGCTCCAGCAATTG
GACAAATTTGAGTCTTGGCAATCACACGCAAACTAATGCAGCACACAAGTTATATATATATGGTTTAAAATCCATGGCCGGGAAGATTATTGAGATGCAAATATTTTGTT
CAATGTTTAGTTATATATTATATATATACAATTTAAGTGTTGAGATATATTTGTGTGAATTATATTAGAAGAAATATTTTGTTCAAAATTTTCTTTTACATATATATATT
TTTGTATTTTGGTAAAGTTAAAGTTGCGCCTTGTGGGACTCCAATTGTTAAAGTAACGCATGGGGTTTGGTATGAAAGAAAAAGTAAATTTAGTTAAGTGGGAAGTGTTG
AATGACACTTTGAGGCATAGAGTCAGATAAACCATCCAAACCCACAAACACATATCTTTTCTCTTCTAAAGTAAACTCCCATTCTCGTCTTCTCTCTGTATATAGAAAAT
ACTTAGATACATCTTGGACGTAACTATATTTGTATATCCC
Protein sequenceShow/hide protein sequence
MQSSILEKEEEEEEEEEEGIRESNKKKESESESGMEMKVIEVDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDHEGTMHNGKRTPESWRKRTEVSREVKAAAETRPVR
KRHHRTLSRPDHLMAGMSPRPTTQNFTIFQMLQQLDKFESWQSHAN