; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G01340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G01340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDNA repair protein XRCC2 homolog
Genome locationClcChr11:1404885..1414566
RNA-Seq ExpressionClc11G01340
SyntenyClc11G01340
Gene Ontology termsGO:0000724 - double-strand break repair via homologous recombination (biological process)
GO:0005657 - replication fork (cellular component)
GO:0033063 - Rad51B-Rad51C-Rad51D-XRCC2 complex (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0008094 - DNA-dependent ATPase activity (molecular function)
InterPro domainsIPR013632 - DNA recombination and repair protein Rad51-like, C-terminal
IPR020588 - DNA recombination and repair protein RecA-like, ATP-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase
IPR030547 - DNA repair protein XRCC2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648111.1 hypothetical protein Csa_004719 [Cucumis sativus]2.4e-16288.92Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        MAL QWIDGDESA EML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEW+GI YGGL C  VFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRI+EA SNGS +TGD ENFDALYATCLRRF YIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLPLWGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSD V+R+K+LSESE +HGKPDGGL LYREYMPSAWQSFVTHRVFVR+SDEHL  SSCEHQPTY SEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKNVRTKPFCLSYL
        LPSLGFLDKFIV NVR +   L  L
Subjt:  LPSLGFLDKFIVKNVRTKPFCLSYL

XP_008456835.1 PREDICTED: DNA repair protein XRCC2 homolog isoform X1 [Cucumis melo]6.8e-16590.46Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        M LSQWIDGDESA EML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILEAISNGS NTGD ENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLP WGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        VLEAAVEEVRKLLLVHPSIVIAS+ATIFGDRSS++VRR+KSLSESE RHGKPDGGL LYREYMPSAWQSFVTHRVFVR SDEHL  SSCEHQPTY SEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKNVRTKPFCLSYL
        LPSLGF+DKFIV NVR +   L  L
Subjt:  LPSLGFLDKFIVKNVRTKPFCLSYL

XP_008456836.1 PREDICTED: DNA repair protein XRCC2 homolog isoform X2 [Cucumis melo]3.7e-16392.36Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        M LSQWIDGDESA EML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILEAISNGS NTGD ENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLP WGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        VLEAAVEEVRKLLLVHPSIVIAS+ATIFGDRSS++VRR+KSLSESE RHGKPDGGL LYREYMPSAWQSFVTHRVFVR SDEHL  SSCEHQPTY SEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKN
        LPSLGF+DKFIV N
Subjt:  LPSLGFLDKFIVKN

XP_038891840.1 DNA repair protein XRCC2 homolog isoform X1 [Benincasa hispida]5.7e-16489.46Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        MALSQWIDGDESA EMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILEAISNGSS+TGD+ENFDAL+ATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLPLWGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRR------------------EKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDE
        VLEAAVEEVRKLLLVHPSIVIASKATIFG+RSSDIVRR                  E+SLSESE RHGK DGG VLYREYMPSAWQSFVTHRVFVR SDE
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRR------------------EKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDE

Query:  HLTASSCEHQPTYFSEWLLPSLGFLDKFIVKN
        H T SSC+ QPTYFSEWLLPSLGFLDKFIVKN
Subjt:  HLTASSCEHQPTYFSEWLLPSLGFLDKFIVKN

XP_038891841.1 DNA repair protein XRCC2 homolog isoform X2 [Benincasa hispida]2.5e-16794.59Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        MALSQWIDGDESA EMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILEAISNGSS+TGD+ENFDAL+ATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLPLWGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        VLEAAVEEVRKLLLVHPSIVIASKATIFG+RSSDIVRRE+SLSESE RHGK DGG VLYREYMPSAWQSFVTHRVFVR SDEH T SSC+ QPTYFSEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKN
        LPSLGFLDKFIVKN
Subjt:  LPSLGFLDKFIVKN

TrEMBL top hitse value%identityAlignment
A0A0A0KMH0 RECA_2 domain-containing protein8.3e-16190.76Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        MAL QWIDGDESA EML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEW+GI YGGL C  VFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRI+EA SNGS +TGD ENFDALYATCLRRF YIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLPLWGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSD V+R+K+LSESE +HGKPDGGL LYREYMPSAWQSFVTHRVFVR+SDEHL  SSCEHQPTY SEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKN
        LPSLGFLDKFIV N
Subjt:  LPSLGFLDKFIVKN

A0A1S3C3R7 DNA repair protein XRCC2 homolog isoform X13.3e-16590.46Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        M LSQWIDGDESA EML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILEAISNGS NTGD ENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLP WGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        VLEAAVEEVRKLLLVHPSIVIAS+ATIFGDRSS++VRR+KSLSESE RHGKPDGGL LYREYMPSAWQSFVTHRVFVR SDEHL  SSCEHQPTY SEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKNVRTKPFCLSYL
        LPSLGF+DKFIV NVR +   L  L
Subjt:  LPSLGFLDKFIVKNVRTKPFCLSYL

A0A1S3C491 DNA repair protein XRCC2 homolog isoform X21.8e-16392.36Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        M LSQWIDGDESA EML RVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGI YGGL CS VFIDLDCRLDITRL QVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILEAISNGS NTGD ENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERD LGVGLHLLVIDSIGAYHWVDR SSSLP WGHNRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        VLEAAVEEVRKLLLVHPSIVIAS+ATIFGDRSS++VRR+KSLSESE RHGKPDGGL LYREYMPSAWQSFVTHRVFVR SDEHL  SSCEHQPTY SEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKN
        LPSLGF+DKFIV N
Subjt:  LPSLGFLDKFIVKN

A0A6J1GZX5 DNA repair protein XRCC2 homolog isoform X11.1e-15589.17Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        MAL QWIDGDE+A EML RV KERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDI+RLSQVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILE   NGS   GD  NFDALY TCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLG+ LHLL+IDSIGAYHWVDR SSSLPLWG+NRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        +LEAAVEEV+KLLLVHPSIVIASKATIFGDRSSDIVRREKSLSE+E RHGK DGG VLYREYMPSAWQSFVTHRVFVR SDE+LT SSCEHQ  YFSEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKN
        LPSLG LDKFIVKN
Subjt:  LPSLGFLDKFIVKN

A0A6J1KC54 DNA repair protein XRCC2 homolog isoform X11.1e-15588.54Show/hide
Query:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL
        MAL QWIDGDESA EML RVLKERTSL+VPPLHRVPL VGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDI+RLSQVL
Subjt:  MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVL

Query:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN
        KLRILE   N     GD  NFDALY TCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLG+GL LL+IDSIGAYHWVDR SSSLPLWG+NRKGFSLAN
Subjt:  KLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLAN

Query:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL
        +LEAAVEE++KLLLVHPSIVIASKATIFGDRSSDIVRREKS SE+E RHGK DGG VLYREYMPSAWQSFVTHRVFVR SDE+LT SSCEHQ  YFSEWL
Subjt:  VLEAAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWL

Query:  LPSLGFLDKFIVKN
        LPSLG LDKFIVKN
Subjt:  LPSLGFLDKFIVKN

SwissProt top hitse value%identityAlignment
O43543 DNA repair protein XRCC23.6e-2030.47Show/hide
Query:  ESALEMLARVLKERTSL--VVPPL---HRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL
        ES  E+LAR L+ R+SL  + P L      P+  G+++E  GP G+ KT++L      CILPK       GGLE  V+FID D   D+ RL  +L+ R+ 
Subjt:  ESALEMLARVLKERTSL--VVPPL---HRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL

Query:  EAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDR--GSSSLPLWGHNRKGFSLANVLE
                     ++ + +   CL RFF + C  S   L TL ++              L LL++DS+ A++W+DR  G  S+ L     +    +  LE
Subjt:  EAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDR--GSSSLPLWGHNRKGFSLANVLE

Query:  AAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDE
          V + R L+L   +  I  KA+   +  S   RR   +              + YR Y+  AWQ  V HR+F    D+
Subjt:  AAVEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDE

Q682D3 DNA repair protein XRCC2 homolog3.9e-8348.52Show/hide
Query:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL
        WI GDE+A +ML+RVLK+R  L++PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNGI YGGL   V+F+DLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL

Query:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPL
        +A  + NG              S+    +  FD  LYA+C++RF Y+RCYDS E L++LKT+H+++Q +++  G  + +L+IDSIGA+HW DR SSSL L
Subjt:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPL

Query:  WGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR-SSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTAS
          HNRK  SL NV+E  V+E++KLLLVH  +V+A+K TI+ ++  ++   R+ S ++    +         +RE+MPS+WQ+FVTH++ +R S ++ +  
Subjt:  WGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR-SSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTAS

Query:  SCEHQPTYFS-EWLLPSLGFLDKFIVKNVR----TKPF
        + +     +S EWL P L  +D+FIV +VR     KPF
Subjt:  SCEHQPTYFS-EWLLPSLGFLDKFIVKNVR----TKPF

Q97BJ9 DNA repair and recombination protein RadA1.6e-0428.28Show/hide
Query:  VVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSF
        + E  G  GS KTQI+ Q AVNC +PKE      GG +  V+ ID +      R+ Q+ K + L+                      L+R    R Y+S 
Subjt:  VVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSF

Query:  EFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAY---HWVDRGS
          +     +  K Q+   +  +   LL++DS+ A+    +V RGS
Subjt:  EFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAY---HWVDRGS

Q9CX47 DNA repair protein XRCC25.3e-1930.69Show/hide
Query:  ESALEMLARVLKERTSL--VVPPL---HRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL
        ES  E+LAR L+ R+SL  + P L      P+  G++ E  GP G+ KT++L      CILPK       GGL+  V+FID D   D+ RL  VL+ R+ 
Subjt:  ESALEMLARVLKERTSL--VVPPL---HRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL

Query:  EAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLANVLEAA
                     ++ +     CL R F   C  S + L TL ++   L          L LL++DS+ +++W+DR S    +          + +LE  
Subjt:  EAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLANVLEAA

Query:  VEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDE
        V E R LL      ++       G  S+D          S  +H  P  G + YR Y+  AWQ  V HRV     DE
Subjt:  VEEVRKLLLVHPSIVIASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDE

Q9HJ68 DNA repair and recombination protein RadA7.4e-0530.2Show/hide
Query:  VVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSF
        + E  G  GS KTQI+ Q AVNC LPKE      GG +  V+ ID +      R+ Q+ K           S   D +         L+R    R Y+S 
Subjt:  VVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRILEAISNGSSNTGDRENFDALYATCLRRFFYIRCYDSF

Query:  EFLATLKTMHHKL---QKERDDL-GVGLHLLVIDSIGAY---HWVDRGS
                 HH++   +K +D      + LL++DS+ A+    +V RGS
Subjt:  EFLATLKTMHHKL---QKERDDL-GVGLHLLVIDSIGAY---HWVDRGS

Arabidopsis top hitse value%identityAlignment
AT5G64520.1 homolog of X-ray repair cross complementing 2 (XRCC2)2.8e-8448.52Show/hide
Query:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL
        WI GDE+A +ML+RVLK+R  L++PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNGI YGGL   V+F+DLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL

Query:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPL
        +A  + NG              S+    +  FD  LYA+C++RF Y+RCYDS E L++LKT+H+++Q +++  G  + +L+IDSIGA+HW DR SSSL L
Subjt:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPL

Query:  WGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR-SSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTAS
          HNRK  SL NV+E  V+E++KLLLVH  +V+A+K TI+ ++  ++   R+ S ++    +         +RE+MPS+WQ+FVTH++ +R S ++ +  
Subjt:  WGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR-SSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTAS

Query:  SCEHQPTYFS-EWLLPSLGFLDKFIVKNVR----TKPF
        + +     +S EWL P L  +D+FIV +VR     KPF
Subjt:  SCEHQPTYFS-EWLLPSLGFLDKFIVKNVR----TKPF

AT5G64520.2 homolog of X-ray repair cross complementing 2 (XRCC2)3.1e-8348.63Show/hide
Query:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL
        WI GDE+A +ML+RVLK+R  L++PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNGI YGGL   V+F+DLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL

Query:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPL
        +A  + NG              S+    +  FD  LYA+C++RF Y+RCYDS E L++LKT+H+++Q +++  G  + +L+IDSIGA+HW DR SSSL L
Subjt:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPL

Query:  WGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR-SSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTAS
          HNRK  SL NV+E  V+E++KLLLVH  +V+A+K TI+ ++  ++   R+ S ++    +         +RE+MPS+WQ+FVTH++ +R S ++ +  
Subjt:  WGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR-SSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTAS

Query:  SCEHQPTYFS-EWLLPSLGFLDKFIVKNV
        + +     +S EWL P L  +D+FIV +V
Subjt:  SCEHQPTYFS-EWLLPSLGFLDKFIVKNV

AT5G64520.3 homolog of X-ray repair cross complementing 2 (XRCC2)9.7e-6953.82Show/hide
Query:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL
        WI GDE+A +ML+RVLK+R  L++PPLHRVPLR GNVVE+ G S SAKTQILIQAA++CILPK WNGI YGGL   V+F+DLDCR D+ RLSQ+LK R+L
Subjt:  WIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRIL

Query:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLK------TMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRG
        +A  + NG              S+    +  FD  LYA+C++RF Y+RCYDS E L++LK      T+H+++Q +++  G  + +L+IDSIGA+HW DR 
Subjt:  EA--ISNG--------------SSNTGDRENFD-ALYATCLRRFFYIRCYDSFEFLATLK------TMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRG

Query:  SSSLPLWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR
        SSSL L  HNRK  SL NV+E  V+E++KLLLVH  +V+A+K TI+ ++
Subjt:  SSSLPLWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIVIASKATIFGDR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCAGTCAGTGGATCGACGGCGATGAGAGCGCCTTGGAAATGCTTGCCAGAGTTCTCAAAGAGCGAACCTCCTTGGTTGTTCCGCCTCTCCACAGAGTTCCTCT
CCGCGTTGGCAATGTGGTCGAACTTGTTGGACCTTCTGGTTCTGCCAAAACGCAGATCTTAATCCAGGCTGCAGTTAATTGCATTCTTCCAAAGGAGTGGAATGGAATCC
GCTATGGTGGCTTGGAGTGCTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCACAAGGCTGTCCCAAGTTCTGAAGCTTCGAATTTTGGAAGCCATTAGCAAT
GGATCCTCAAACACAGGAGATCGGGAAAATTTTGATGCACTATATGCTACATGCTTGAGAAGATTCTTTTACATCCGTTGCTATGACAGTTTTGAATTTCTTGCCACTCT
CAAGACCATGCACCATAAACTTCAAAAAGAAAGAGATGACCTTGGAGTTGGGTTACATCTACTTGTGATTGACAGTATTGGAGCTTATCATTGGGTTGATCGTGGCTCTT
CATCCTTGCCTCTGTGGGGTCACAACAGGAAAGGCTTTTCTCTTGCAAATGTGCTAGAAGCTGCAGTAGAAGAGGTTAGAAAGCTTTTGCTGGTGCATCCGAGTATTGTT
ATTGCTTCAAAAGCAACCATTTTTGGGGATAGATCTTCTGACATAGTTAGACGTGAAAAATCTTTATCAGAGTCAGAACCGAGACATGGGAAACCTGATGGTGGACTAGT
TTTGTACCGAGAGTATATGCCTTCTGCATGGCAGTCTTTTGTCACGCACAGAGTTTTTGTTCGAAGCTCAGACGAACATCTTACAGCGAGCAGTTGTGAGCATCAACCAA
CATATTTTTCTGAATGGCTGCTACCATCCCTTGGTTTCCTCGATAAATTTATTGTGAAAAATGTGAGAACCAAACCATTTTGCTTAAGCTACTTGTAA
mRNA sequenceShow/hide mRNA sequence
CATCTCTCGTTCAAAATTAACAAATAAAGTATAAAACTCAAGTCAAGTTGAAGTGGCTCGGCAATTTCCCTCCAAATCCCTTGCCCGCCGCTCTGGGGAACAAGGGGCTT
ATTATGGCGCTCAGTCAGTGGATCGACGGCGATGAGAGCGCCTTGGAAATGCTTGCCAGAGTTCTCAAAGAGCGAACCTCCTTGGTTGTTCCGCCTCTCCACAGAGTTCC
TCTCCGCGTTGGCAATGTGGTCGAACTTGTTGGACCTTCTGGTTCTGCCAAAACGCAGATCTTAATCCAGGCTGCAGTTAATTGCATTCTTCCAAAGGAGTGGAATGGAA
TCCGCTATGGTGGCTTGGAGTGCTCAGTGGTGTTCATTGACTTGGATTGTCGTCTTGACATCACAAGGCTGTCCCAAGTTCTGAAGCTTCGAATTTTGGAAGCCATTAGC
AATGGATCCTCAAACACAGGAGATCGGGAAAATTTTGATGCACTATATGCTACATGCTTGAGAAGATTCTTTTACATCCGTTGCTATGACAGTTTTGAATTTCTTGCCAC
TCTCAAGACCATGCACCATAAACTTCAAAAAGAAAGAGATGACCTTGGAGTTGGGTTACATCTACTTGTGATTGACAGTATTGGAGCTTATCATTGGGTTGATCGTGGCT
CTTCATCCTTGCCTCTGTGGGGTCACAACAGGAAAGGCTTTTCTCTTGCAAATGTGCTAGAAGCTGCAGTAGAAGAGGTTAGAAAGCTTTTGCTGGTGCATCCGAGTATT
GTTATTGCTTCAAAAGCAACCATTTTTGGGGATAGATCTTCTGACATAGTTAGACGTGAAAAATCTTTATCAGAGTCAGAACCGAGACATGGGAAACCTGATGGTGGACT
AGTTTTGTACCGAGAGTATATGCCTTCTGCATGGCAGTCTTTTGTCACGCACAGAGTTTTTGTTCGAAGCTCAGACGAACATCTTACAGCGAGCAGTTGTGAGCATCAAC
CAACATATTTTTCTGAATGGCTGCTACCATCCCTTGGTTTCCTCGATAAATTTATTGTGAAAAATGTGAGAACCAAACCATTTTGCTTAAGCTACTTGTAAATAATGAAG
TACCATGAAATCTAGAAGCTCAAGCTATATCGATTTGATATTAAAATACTAATATCATAAATGTTTGAAGACAAAGTCGAATGTTCAG
Protein sequenceShow/hide protein sequence
MALSQWIDGDESALEMLARVLKERTSLVVPPLHRVPLRVGNVVELVGPSGSAKTQILIQAAVNCILPKEWNGIRYGGLECSVVFIDLDCRLDITRLSQVLKLRILEAISN
GSSNTGDRENFDALYATCLRRFFYIRCYDSFEFLATLKTMHHKLQKERDDLGVGLHLLVIDSIGAYHWVDRGSSSLPLWGHNRKGFSLANVLEAAVEEVRKLLLVHPSIV
IASKATIFGDRSSDIVRREKSLSESEPRHGKPDGGLVLYREYMPSAWQSFVTHRVFVRSSDEHLTASSCEHQPTYFSEWLLPSLGFLDKFIVKNVRTKPFCLSYL