CuGenDBv2

Gene ID	Clc11G02700
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Nucleic acid-binding, OB-fold containing protein
Genome location	ClcChr11:2615306..2621785
RNA-Seq Expression	Clc11G02700
Synteny	Clc11G02700
Gene Ontology terms	GO:0006352 - DNA-templated transcription, initiation (biological process) GO:0005736 - RNA polymerase I complex (cellular component) GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domains	IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily IPR045113 - RNA polymerase Rpb7-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008466499.1 PREDICTED: uncharacterized protein LOC103503892 isoform X1 [Cucumis melo]

1.1e-103

88.79

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASAVIT EDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSV+ S+K+KMRENEG V
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            ++  D N +I  ND + KT+KQKTTRIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

XP_011652444.1 uncharacterized protein LOC101216589 [Cucumis sativus]

8.6e-104

88.79

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+ANMVVYVHPSKSKK+SQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASAVIT EDIRDEFKHRTKHGEEMFVSRAHKHH+IKVGTMIR LVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSVT S KRKMRENEG V
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            S+  D N +I NND + KT+KQK TRIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

XP_038889707.1 uncharacterized protein LOC120079556 isoform X1 [Benincasa hispida]

1.7e-107

89.91

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+AN+VVYVHPSKSKKVSQAVLRELG MLLKFDEKFEGVLLAYEA IIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGF+S VITDEDIRDEFKHRTKHGEEMFVSR HKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSVTNS+K+K RENEG  
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  SIVPDANTLISNNDGRSKTRKQKTTRIS
        S+  DAN LI NND +SKT++QKTTRIS
Subjt:  SIVPDANTLISNNDGRSKTRKQKTTRIS

XP_038889709.1 uncharacterized protein LOC120079556 isoform X2 [Benincasa hispida]

4.1e-106

89.91

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+AN+VVYVHPSKSKKVSQAVLRELG MLLKFDEKFEGVLLAYEA IIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGF+S VITDEDIRDEFKHRTKHGEEMFVSR HKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSVTNS K+K RENEG  
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  SIVPDANTLISNNDGRSKTRKQKTTRIS
        S+  DAN LI NND +SKT++QKTTRIS
Subjt:  SIVPDANTLISNNDGRSKTRKQKTTRIS

XP_038898978.1 uncharacterized protein LOC120086413 isoform X3 [Benincasa hispida]

3.5e-105

87.93

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        M+GLKVS+ANMVVYVHPSKSKKVSQAVLR LGAMLLKFDEKFEGVLLAYEAKIIDK AKILSGVHPYFGVTIKAKLLLFSPKPNML+EGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASAVIT+EDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHI+GSLVPSHTGSIHWLEKN VEG+VT+S+K+KMRENEG+V
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            S+  + N LI NND +SKT+KQKTTRIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGG8 Uncharacterized protein

4.2e-104

88.79

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+ANMVVYVHPSKSKK+SQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASAVIT EDIRDEFKHRTKHGEEMFVSRAHKHH+IKVGTMIR LVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSVT S KRKMRENEG V
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            S+  D N +I NND + KT+KQK TRIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

A0A1S3CRF8 uncharacterized protein LOC103503892 isoform X2

1.3e-102

88.79

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASAVIT EDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSV+ S K+KMRENEG V
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            ++  D N +I  ND + KT+KQKTTRIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

A0A1S4E5I5 uncharacterized protein LOC103503892 isoform X1

5.4e-104

88.79

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASAVIT EDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSV+ S+K+KMRENEG V
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            ++  D N +I  ND + KT+KQKTTRIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

A0A5D3E6A0 Putative DNA-directed RNA polymerase I subunit RPA43

5.4e-104

88.79

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+ANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASAVIT EDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN VEGSV+ S+K+KMRENEG V
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            ++  D N +I  ND + KT+KQKTTRIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

A0A6J1D5Y9 uncharacterized protein LOC111016757

1.7e-102

84.48

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLKVS+AN+VVYVHPSKSKKVSQAVLRELGAMLLKFDE+FEGVLLAY+AKI DK+AKILSGVHPYFGVT+KAKLLLFSPKPNMLLEGKVVKLRQES+H
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV
        +IVLGFASA ITDEDIRDEFKHRTKH EEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKN +EGSVT+  ++K R+NEG+ 
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDV

Query:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS
            S+  D N LI NND +SKT+KQKT+RIS
Subjt:  ----SIVPDANTLISNNDGRSKTRKQKTTRIS

SwissProt top hits

e value

%identity

Alignment

O43036 DNA-directed RNA polymerase I subunit rpa43

2.5e-05

23.31

Show/hide

Query:  NMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYE-AKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFAS
        ++ + + P  S+    A+   + +M+L    +  G++LAY+  + ++K+AK++    P+  + ++  +L+FSPK    LEGK+  +    I +++LG  +
Subjt:  NMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYE-AKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFAS

Query:  AVITDEDI-RDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEE--ILHISGSLVPS
        A I  + I +D         EE    + +  ++++ G  + F+V     E  +  + G+L  S
Subjt:  AVITDEDI-RDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEE--ILHISGSLVPS

Arabidopsis top hits

e value

%identity

Alignment

AT1G75670.1 DNA-directed RNA polymerases

5.6e-61

54.64

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLK+SEA +++++HPS+S+ V Q + REL ++L +++E F+GVLLAY+A +  K AKIL+G+HPYFGV +  +LLLF PKP   +EGK+VK+  ESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMR
        +IVLGF++AVITD DIR+EFK+R + GE  FVSR+HK H +K+GTM+R  V+SFDEE++HI+GSL+P +TG + WLEK   E   T+ + ++ +
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMR

AT1G75670.2 DNA-directed RNA polymerases

5.6e-61

54.64

Show/hide

Query:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH
        MEGLK+SEA +++++HPS+S+ V Q + REL ++L +++E F+GVLLAY+A +  K AKIL+G+HPYFGV +  +LLLF PKP   +EGK+VK+  ESIH
Subjt:  MEGLKVSEANMVVYVHPSKSKKVSQAVLRELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIH

Query:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMR
        +IVLGF++AVITD DIR+EFK+R + GE  FVSR+HK H +K+GTM+R  V+SFDEE++HI+GSL+P +TG + WLEK   E   T+ + ++ +
Subjt:  IIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHHVIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGTTTAAGATTGATGAACTAAGATATGCTTGTAGCAGCCACATCCGTCCGCCTACAGCCGGCCGCTGCACCACCACCGTTCGAGTCGACGTCTGCCGCTCGCCGTA
CTGGGTACCTACGCCGACTGCTCACGCCGTTGCTGATTCTCCTCCTCCACCACCCTCGTCGGAGTTCATCGGGTCCGGTGAGTGTGCTGTGGATTCAAGCTGTGATCGTT
GGAACTTTGGAGGTCTGGATCAAGTGACTTTTGGGGTAGGAGTTTTGGACGTTCCAAGGGAATTGAAGTGTGGGTTATGCAATATAAAGAGAGTTAAGCCCGCTAGTCTT
GGTTTCTATTTCAGTGTTGAGAATCCTGATGGTCTGGATAATGCGGGTGTCTCAAAACCTAAGCTTATGTTTTACTTCTTGTGTGAGTGCCATACACATTTGGACGTCGG
TGTGACACAAATGTGTACGCCAACATTTGCAACACACGTGGTAATAAAAGTTCGCTGTTTTTACCTTCTTCGAGCTCTCTTTCTTCTCTGGTTGTTGTGGATTCTTCTCC
TCCTTGTTTCGGTTGCCATTTCAATGGAGGGGCTCAAGGTTTCAGAGGCTAATATGGTTGTTTACGTTCACCCATCTAAAAGTAAGAAGGTTTCGCAAGCGGTGCTTCGA
GAGCTTGGTGCTATGCTTCTAAAATTTGATGAAAAATTTGAAGGCGTTCTTCTGGCTTATGAGGCCAAAATTATCGATAAAAATGCGAAGATTCTGTCTGGAGTGCATCC
CTATTTTGGTGTGACAATAAAGGCAAAGCTATTACTTTTCTCTCCAAAGCCAAACATGCTTTTAGAGGGAAAGGTGGTGAAGCTTAGGCAAGAATCAATCCATATTATTG
TCTTAGGTTTTGCTTCTGCTGTAATAACCGATGAAGACATTCGCGACGAATTCAAGCATAGAACAAAACATGGAGAAGAAATGTTTGTCAGCAGAGCTCACAAGCACCAT
GTAATAAAGGTTGGGACAATGATACGATTTTTGGTGAAGAGTTTTGATGAGGAAATATTGCATATCTCTGGATCTCTAGTTCCATCTCACACAGGGAGCATCCATTGGTT
GGAGAAGAATTTGGTTGAAGGTTCAGTGACTAATAGCAACAAAAGGAAGATGAGAGAAAATGAGGGAGACGTTAGCATTGTGCCAGATGCAAATACACTTATCTCGAACA
ACGACGGTAGATCAAAAACCAGAAAGCAAAAAACTACCAGAATATCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEFKIDELRYACSSHIRPPTAGRCTTTVRVDVCRSPYWVPTPTAHAVADSPPPPPSSEFIGSGECAVDSSCDRWNFGGLDQVTFGVGVLDVPRELKCGLCNIKRVKPASL
GFYFSVENPDGLDNAGVSKPKLMFYFLCECHTHLDVGVTQMCTPTFATHVVIKVRCFYLLRALFLLWLLWILLLLVSVAISMEGLKVSEANMVVYVHPSKSKKVSQAVLR
ELGAMLLKFDEKFEGVLLAYEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHIIVLGFASAVITDEDIRDEFKHRTKHGEEMFVSRAHKHH
VIKVGTMIRFLVKSFDEEILHISGSLVPSHTGSIHWLEKNLVEGSVTNSNKRKMRENEGDVSIVPDANTLISNNDGRSKTRKQKTTRIS

Clc11G02700 (gene) of Watermelon (cordophanus) v2 genome