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Clc11G02790 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G02790
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:2700469..2700952
RNA-Seq ExpressionClc11G02790
SyntenyClc11G02790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061572.1 hypothetical protein E6C27_scaffold41G001340 [Cucumis melo var. makuwa]5.5e-1786.79Show/hide
Query:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
        V+LGDLIRNI+IVPTKKHG+ATA+DIESGFLLLDHP+ASLSK+GFPAVSEA+L
Subjt:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
KAE8651522.1 hypothetical protein Csa_023920, partial [Cucumis sativus]6.7e-1582.35Show/hide
Query:  ELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEAD
        ELGDLI NI+IVPTKKHG+ATA+DI+SGFLLLDHP+ASLSK+GFPAVS+A+
Subjt:  ELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEAD
TYK10702.1 hypothetical protein E5676_scaffold332G00110 [Cucumis melo var. makuwa]5.5e-1786.79Show/hide
Query:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
        V+LGDLIRNI+IVPTKKHG+ATA+DIESGFLLLDHP+ASLSK+GFPAVSEA+L
Subjt:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
TrEMBL top hitse value%identityAlignment
A0A5A7V070 Uncharacterized protein2.7e-1786.79Show/hide
Query:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
        V+LGDLIRNI+IVPTKKHG+ATA+DIESGFLLLDHP+ASLSK+GFPAVSEA+L
Subjt:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
A0A5D3CHF0 Uncharacterized protein2.7e-1786.79Show/hide
Query:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
        V+LGDLIRNI+IVPTKKHG+ATA+DIESGFLLLDHP+ASLSK+GFPAVSEA+L
Subjt:  VELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATCCGTCGAATGAAGTTCATCAACGGTTCAATATCAAAGAGAAATCTACTTCAAGCGGACGAATCACGGCGCTGCGTTTTAACGGCCGGACGTTGATCGTCGTGTT
CGGAGGGAAAAAACAACAATCAACGGTGGAATTAGGCGATTTAATCAGGAATATCGTGATCGTGCCAACAAAGAAGCATGGAAACGCAACGGCCAAGGATATAGAATCTG
GTTTTCTGTTGCTTGATCATCCGCAAGCATCGCTTTCGAAAAGTGGTTTTCCGGCGGTTTCTGAGGCGGATTTGCCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATCCGTCGAATGAAGTTCATCAACGGTTCAATATCAAAGAGAAATCTACTTCAAGCGGACGAATCACGGCGCTGCGTTTTAACGGCCGGACGTTGATCGTCGTGTT
CGGAGGGAAAAAACAACAATCAACGGTGGAATTAGGCGATTTAATCAGGAATATCGTGATCGTGCCAACAAAGAAGCATGGAAACGCAACGGCCAAGGATATAGAATCTG
GTTTTCTGTTGCTTGATCATCCGCAAGCATCGCTTTCGAAAAGTGGTTTTCCGGCGGTTTCTGAGGCGGATTTGCCCTGA
Protein sequenceShow/hide protein sequence
MYPSNEVHQRFNIKEKSTSSGRITALRFNGRTLIVVFGGKKQQSTVELGDLIRNIVIVPTKKHGNATAKDIESGFLLLDHPQASLSKSGFPAVSEADLP