; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G03230 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G03230
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHeat shock protein DnaJ, cysteine-rich domain containing protein
Genome locationClcChr11:3112771..3119974
RNA-Seq ExpressionClc11G03230
SyntenyClc11G03230
Gene Ontology termsGO:0061077 - chaperone-mediated protein folding (biological process)
GO:0009570 - chloroplast stroma (cellular component)
GO:0101031 - chaperone complex (cellular component)
GO:0044183 - protein folding chaperone (molecular function)
InterPro domainsIPR036410 - Heat shock protein DnaJ, cysteine-rich domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586393.1 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.1e-6184.06Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN
        MA+SI SSTPICSFN S+KP PGV VGNSVP KAFRINEAFQ TNP +LLS +VKASDGA+SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD+
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

XP_004139310.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic [Cucumis sativus]1.7e-6791.24Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
        MAFSI SSTPICSFNHSS PKPGVLVGNSVP KAFRINEAFQ TN +RLLSF+VKASDGA+S QTTKY+SIVCTDCDGNGAV CSQCKGTGVNSVDHFNG
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD+
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

XP_008457580.1 PREDICTED: uncharacterized protein LOC103497244 [Cucumis melo]1.4e-6689.05Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
        MAFSI SSTPICSFNHSS PKPGVLVGNSVP KAFR+NEA Q TNP+R LSF+ KASDGA+S QTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        QFKAGGLCWLCRGKRD+LCGGCNGAGFVGGFMSTAD+
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

XP_022938233.1 uncharacterized protein LOC111444376 [Cucurbita moschata]1.2e-6084.06Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN
        MA+SI SSTPICSFN S+KP PGV VGNSVP KAFRINEAFQ TNP +LLS +VKASDGA SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD+
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

XP_038889638.1 protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic-like [Benincasa hispida]8.4e-6789.78Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
        MAFS  SSTPICSFNHSSKP  GVL+GNSVP KAFRIN+AFQ TNP+RLLSF+VKASDGA+SNQTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        QFKAG LCWLCRGKRDILCGGCNGAGFVGGFMSTAD+
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

TrEMBL top hitse value%identityAlignment
A0A0A0LFZ2 Uncharacterized protein8.2e-6891.24Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
        MAFSI SSTPICSFNHSS PKPGVLVGNSVP KAFRINEAFQ TN +RLLSF+VKASDGA+S QTTKY+SIVCTDCDGNGAV CSQCKGTGVNSVDHFNG
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD+
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

A0A1S3C5F0 uncharacterized protein LOC1034972447.0e-6789.05Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
        MAFSI SSTPICSFNHSS PKPGVLVGNSVP KAFR+NEA Q TNP+R LSF+ KASDGA+S QTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        QFKAGGLCWLCRGKRD+LCGGCNGAGFVGGFMSTAD+
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

A0A5A7V544 Chaperone protein DnaJ-like7.0e-6789.05Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
        MAFSI SSTPICSFNHSS PKPGVLVGNSVP KAFR+NEA Q TNP+R LSF+ KASDGA+S QTTKY+SIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNG

Query:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        QFKAGGLCWLCRGKRD+LCGGCNGAGFVGGFMSTAD+
Subjt:  QFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

A0A6J1FIB2 uncharacterized protein LOC1114443765.7e-6184.06Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN
        MA+SI SSTPICSFN S+KP PGV VGNSVP KAFRINEAFQ TNP +LLS +VKASDGA SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD+
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

A0A6J1HSG2 uncharacterized protein LOC1114657183.7e-6083.33Show/hide
Query:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN
        MA+SI SSTPI SFN S+KP PGV VGNSVP KAFRINEAFQ TNP +LLS +VKASDGA+SN+ TTKY+SIVCTDCDGNGAV C+QC+GTGVNS DHFN
Subjt:  MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQ-TTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFN

Query:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT
        G+FKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTAD+
Subjt:  GQFKAGGLCWLCRGKRDILCGGCNGAGFVGGFMSTADT

SwissProt top hitse value%identityAlignment
Q9SN73 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic1.0e-3050.38Show/hide
Query:  SSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAG
        SS    C  + S  PKP      S       + +  ++    R  SF+VKA++   + Q TK  S+VC +C+G G V CSQCKG GVN +DHFNGQFKAG
Subjt:  SSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAG

Query:  GLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
         LCWLCRGK+++LCG CNGAGF+GGF+ST D
Subjt:  GLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

Q9XF14 Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic1.2e-2850Show/hide
Query:  SSKPKPGVLVGNSVPPK-AFRINEAFQITNPVRLLSFQVKASDGAES-NQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGK
        ++ P P  L+  S P   +FR      ++   + L  + KA++  +S  +  K +SI+C DC+GNGA++C++C+G GVNSVD+F G+FKAG LCWLCRGK
Subjt:  SSKPKPGVLVGNSVPPK-AFRINEAFQITNPVRLLSFQVKASDGAES-NQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWLCRGK

Query:  RDILCGGCNGAGFVGGFMSTAD
        R+ILCG CNGAGF+GGF+ST D
Subjt:  RDILCGGCNGAGFVGGFMSTAD

Arabidopsis top hitse value%identityAlignment
AT3G47650.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein7.2e-3250.38Show/hide
Query:  SSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAG
        SS    C  + S  PKP      S       + +  ++    R  SF+VKA++   + Q TK  S+VC +C+G G V CSQCKG GVN +DHFNGQFKAG
Subjt:  SSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAG

Query:  GLCWLCRGKRDILCGGCNGAGFVGGFMSTAD
         LCWLCRGK+++LCG CNGAGF+GGF+ST D
Subjt:  GLCWLCRGKRDILCGGCNGAGFVGGFMSTAD

AT5G17840.1 DnaJ/Hsp40 cysteine-rich domain superfamily protein2.2e-0442.37Show/hide
Query:  CTDCDGNGAVLCSQCKGTG--VNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVG
        CT C+  GA+LCS C GTG  V+S+    G       C  C G  +I+C  C G G VG
Subjt:  CTDCDGNGAVLCSQCKGTG--VNSVDHFNGQFKAGGLCWLCRGKRDILCGGCNGAGFVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTTTCTATAAGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCGGTGCCTCCGAAGGCTTTTAGGAT
AAATGAGGCGTTTCAAATAACAAACCCCGTTAGGCTTTTGTCTTTTCAGGTCAAGGCTTCAGATGGTGCAGAGAGTAACCAAACCACAAAATACAGAAGCATAGTTTGCA
CCGACTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGTAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTG
TGCAGAGGCAAAAGGGATATCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACACTAAAGATGTTTATAGGACGAGGCAGTGGCA
GAGATGGCTTTCTCGTCCCTATGCCTATTTAGATGAGGGCATCGAGGACATAAGAGTAATTGAACAACTCTCTTCCCCGTCTTCCCTTACCCGCCGCCCCGCCGTGAGTA
AAGAGAGCTACGTCTTTCGATCTCCAGTATCAGTTTCCCATTCTTCACACAAGGTACTCTCTTTCTCTATCTTTCTCTATCTTTCTCTATCTTTCTCTCTTCTTCTTCTA
TTTCCAATCTTCTTTCTTCCTCCAGACGTATTCGATTTAGCGAAATTCACCGTCTTTCTTCCCTTTCCTACTGATTCAACCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTTTCTATAAGTTCTTCCACACCCATTTGCTCCTTTAATCACTCGAGCAAGCCCAAGCCTGGGGTTCTTGTTGGCAATTCGGTGCCTCCGAAGGCTTTTAGGAT
AAATGAGGCGTTTCAAATAACAAACCCCGTTAGGCTTTTGTCTTTTCAGGTCAAGGCTTCAGATGGTGCAGAGAGTAACCAAACCACAAAATACAGAAGCATAGTTTGCA
CCGACTGCGATGGAAATGGTGCTGTCCTATGTTCTCAGTGTAAAGGAACAGGAGTTAATTCAGTGGATCACTTCAATGGACAGTTTAAAGCTGGTGGCTTATGCTGGTTG
TGCAGAGGCAAAAGGGATATCCTTTGTGGGGGCTGTAATGGAGCTGGTTTTGTGGGTGGATTTATGAGTACAGCTGACACTAAAGATGTTTATAGGACGAGGCAGTGGCA
GAGATGGCTTTCTCGTCCCTATGCCTATTTAGATGAGGGCATCGAGGACATAAGAGTAATTGAACAACTCTCTTCCCCGTCTTCCCTTACCCGCCGCCCCGCCGTGAGTA
AAGAGAGCTACGTCTTTCGATCTCCAGTATCAGTTTCCCATTCTTCACACAAGGTACTCTCTTTCTCTATCTTTCTCTATCTTTCTCTATCTTTCTCTCTTCTTCTTCTA
TTTCCAATCTTCTTTCTTCCTCCAGACGTATTCGATTTAGCGAAATTCACCGTCTTTCTTCCCTTTCCTACTGATTCAACCTAAACTGGTAAGTAGTAATTCGCGCGGTG
CTTTCAGAAACGGACGGGTTTCAGCAATAAGAGCCTTGGACACGAAGATTTTGACCCTGTGGGTTGTTAATATCTATCTGTACAATGAAGAAAGGCTTGCACCCTCAAAT
GCAGTGGATATCATATGTCACTCAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACAATGTCGGTAAAGTCTACCACTTCAGAGCAAGGCGCCAAATGGCTG
AAAGTGTTGGGCAAATTGCCAGGTTCAGACGACGTTACGAGAAAGGGATTGCTGAAAATGTTGAAAATGCTGAAAAGTGAGGTTCAAGGCAGCTCAAGGATCAGCTGTTC
ACTTGGATGATTATGGATTCGTTTTGAGAGCATGACCTTGTGAGTGTTAGGAATTTAAATTTCACTTCTTTCAGTGGAGTCAATCCCTTTTCATAGCATTTTATGACACT
GAGTTATTTCTTATAATGGTTTAGATGTGCTTTTACCATTAGAAATATCTAATCTGCATTCCTATTTTCTGTTCAATAAATGAGATCATTTTCCACCTTTTTTTTATCGG
GAGTCTGTAGCTCTGCTTCCTTATATGCTGTACTAAGAGATGTCGAGTTTTTTGGTACTAAGCTCACCCAAAGGTTCAAATTTGAGACCTCTAAGCTGGTATGACCAAGA
GACGTTAAACCATTGGCAACGAGGCTGCCCCATGGGGGGGCATCTTACACGTTATTTATCTCATTGTGTAATCAAACTCACAGGGCTTTGTATGCTAATAAAAACCTACT
AAATAGTGGAGTTGTTGACTTGGGTATACTCTAGTTGTTAGGTATTTAATGCCTCCCCTAACCCTATGAATTCTAGGTTTGAATCCCTTAAAAAAGAGTTGGGTATTCTT
TTGGATAACTTTGGTGTCTGAGGGTGGACCTATTGAGGTTGGAATAATGTAGTTGGTAGTCTTATTCGAGATAAGAAAAAGAAACTATTTATACATCGAAGTAGCGGTGA
GCGTAATAGTCCAAAAAATCAGCCAACCGCTAGATTGTGAAAAATCCAAACGGACAAAAATTCTAAGAATAAAACCGACTGATTGATGGTTTGCACTCCTTGACGGTCGA
GGTTGGTTTGATCATGTACTAACCGACCATAGTGGGTTCAGTGGCGGTTTGGTTGGAAAACTGACTCCAACTAACTGGTGCATACCCCTACACCAAATGGTTTAGTTAGG
CAATGACGACTACATCGAGTATTTTTTCATCAAGATGCATTGCTCATTGCTATCATGTTTGGAGCATTAGCTTAGCTTTTTAACTAATGGCTTCCATTTTTTTTCCACCA
TTTCCCAGTTTCCTGGAAAAAGGTCTTACGCATATGGTAAAAGTGAAGTATACATTTATACAATATTTGTTTTAGCCATTGACAAATCAGTATGGTGTTTTGTAATGCTT
GATCAATTCCTTTTGCGTATTTGATTCTTTT
Protein sequenceShow/hide protein sequence
MAFSISSSTPICSFNHSSKPKPGVLVGNSVPPKAFRINEAFQITNPVRLLSFQVKASDGAESNQTTKYRSIVCTDCDGNGAVLCSQCKGTGVNSVDHFNGQFKAGGLCWL
CRGKRDILCGGCNGAGFVGGFMSTADTKDVYRTRQWQRWLSRPYAYLDEGIEDIRVIEQLSSPSSLTRRPAVSKESYVFRSPVSVSHSSHKVLSFSIFLYLSLSFSLLLL
FPIFFLPPDVFDLAKFTVFLPFPTDST