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Clc11G03235 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G03235
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRibosomal protein L31
Genome locationClcChr11:3118622..3120183
RNA-Seq ExpressionClc11G03235
SyntenyClc11G03235
Gene Ontology termsGO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030387.1 hypothetical protein SDJN02_08734, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-2081.54Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE
        MQWISYVTQSGRLMHVMMTKIH+VGKVYH RARRQ+AES+GQIA+F+RRYEK I EN E+ EK E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE

XP_022143125.1 uncharacterized protein LOC111013069 [Momordica charantia]8.4e-2493.65Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK
        MQWISYVTQSGRLMHVMMTKIH+VGKVYHFRA+RQMAESVGQIA+F+RRYEKGIAENVENAEK
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK

XP_022946219.1 uncharacterized protein LOC111450371 [Cucurbita moschata]6.7e-2183.08Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE
        MQWISYVTQSGRLMHVMMTKIH+VGKVYHFRARRQ+AES+GQIA+F+RRYEK I EN E+ EK E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE

XP_023547264.1 uncharacterized protein LOC111806134 [Cucurbita pepo subsp. pepo]2.5e-2083.08Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE
        MQWISYVTQSGRLMHVMMTKIH+VGKVYH RARRQ+AESVGQIA+F+RRYEK I EN E+ EK E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE

XP_038890309.1 uncharacterized protein LOC120079925 [Benincasa hispida]6.0e-2290.48Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK
        MQWISYVTQSGRLMHVMMTKIH+VGKVYH RARRQMAESVGQIARF+RRYEK IAENVEN +K
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK

TrEMBL top hitse value%identityAlignment
A0A067F7J7 Uncharacterized protein (Fragment)6.7e-1980.95Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK
        MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMA+S+GQ+A+FRRRYE+ +  + EN EK
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK

A0A6J1CPB3 uncharacterized protein LOC1110130694.1e-2493.65Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK
        MQWISYVTQSGRLMHVMMTKIH+VGKVYHFRA+RQMAESVGQIA+F+RRYEKGIAENVENAEK
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEK

A0A6J1G367 uncharacterized protein LOC1114503713.2e-2183.08Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE
        MQWISYVTQSGRLMHVMMTKIH+VGKVYHFRARRQ+AES+GQIA+F+RRYEK I EN E+ EK E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE

A0A6J1KGB8 uncharacterized protein LOC1114936442.1e-2083.08Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE
        MQWISYVTQSGRLMHVMMTKIH+VGKVY FRARRQ+AESVGQIA+F+RRYEK I EN E+ EK E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFE

A0A6P4BJJ8 uncharacterized protein LOC1074326158.8e-1984.75Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVE
        MQWISYVTQSGRLMHVMMTKIHNVGKVYH +A+RQMAE+VGQIA+FR+RYEKGI E  E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G55125.1 Ribosomal protein L313.0e-1974.58Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVE
        MQWISYVTQSGRLMHVMMT+IH+VGKVYHF A+RQMA+S+GQIA+F+RR+ +  AE  E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVE

AT5G55125.2 Ribosomal protein L313.0e-1974.58Show/hide
Query:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVE
        MQWISYVTQSGRLMHVMMT+IH+VGKVYHF A+RQMA+S+GQIA+F+RR+ +  AE  E
Subjt:  MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTGGATATCATATGTCACTCAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACAATGTCGGTAAAGTCTACCACTTCAGAGCAAGGCGCCAAATGGC
TGAAAGTGTTGGGCAAATTGCCAGGTTCAGACGACGTTACGAGAAAGGGATTGCTGAAAATGTTGAAAATGCTGAAAAGTTTGAATCCCTTAAAAAAGAGTTGGGTATTC
TTTTGGATAACTTTGGTTTTCCTGGAAAAAGGTCTTACGCATATGGTAAAAGTGAAGTATACATTTATACAATATTTGTTTTAGCCATTGACAAATCAGTATGTTTTACA
TGTGTTACTGTTAGTATCAAAAGTACTCCACACGAACATCAAAGGAAGACATACAAAACTAAAAGGGAACTTCCTTGTAGTTGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTGGATATCATATGTCACTCAGAGTGGCAGATTGATGCACGTTATGATGACCAAGATACACAATGTCGGTAAAGTCTACCACTTCAGAGCAAGGCGCCAAATGGC
TGAAAGTGTTGGGCAAATTGCCAGGTTCAGACGACGTTACGAGAAAGGGATTGCTGAAAATGTTGAAAATGCTGAAAAGTTTGAATCCCTTAAAAAAGAGTTGGGTATTC
TTTTGGATAACTTTGGTTTTCCTGGAAAAAGGTCTTACGCATATGGTAAAAGTGAAGTATACATTTATACAATATTTGTTTTAGCCATTGACAAATCAGTATGTTTTACA
TGTGTTACTGTTAGTATCAAAAGTACTCCACACGAACATCAAAGGAAGACATACAAAACTAAAAGGGAACTTCCTTGTAGTTGGTGA
Protein sequenceShow/hide protein sequence
MQWISYVTQSGRLMHVMMTKIHNVGKVYHFRARRQMAESVGQIARFRRRYEKGIAENVENAEKFESLKKELGILLDNFGFPGKRSYAYGKSEVYIYTIFVLAIDKSVCFT
CVTVSIKSTPHEHQRKTYKTKRELPCSW