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Clc11G03640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G03640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAnaphase-promoting complex
Genome locationClcChr11:3510695..3512013
RNA-Seq ExpressionClc11G03640
SyntenyClc11G03640
Gene Ontology termsGO:0030071 - regulation of mitotic metaphase/anaphase transition (biological process)
GO:0031145 - anaphase-promoting complex-dependent catabolic process (biological process)
GO:0005680 - anaphase-promoting complex (cellular component)
InterPro domainsIPR018860 - Anaphase-promoting complex, subunit CDC26


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5564275.1 hypothetical protein RHGRI_000468 [Rhododendron griersonianum]6.7e-0756.06Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSLLHNLNR-NKDPASKAQRLDAS
        MLRR+P+KI+VK+EDKEELE+ R+R+A A A+T TTS+    +SLLH+ +R +KDP+SK+ R+  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSLLHNLNR-NKDPASKAQRLDAS

KAG6586369.1 Triphosphate tunnel metalloenzyme 3, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1171.64Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATA------STDTTST-NSSLLHNLNRNKDPASKAQRLD
        MLRRQP+KI+VKIEDKEELEQ R+RAA A A      +TDTTS+  +SLLHNLNRNKDP SKAQRL+
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATA------STDTTST-NSSLLHNLNRNKDPASKAQRLD

KGN60724.1 hypothetical protein Csa_019232 [Cucumis sativus]1.3e-1074.19Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS
        MLRRQPT IDV+IEDKEELEQLR+R A A       ST SSLLHNL+RNKDPASKAQRL  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS

OVA19190.1 Anaphase-promoting complex [Macleaya cordata]6.1e-0855.38Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSLLHNLNRNKDPASKAQRLDAS
        MLRR+P+KI+VKIEDKEELE+ R+R+  ++A+T TT+T    ++L+H L+RNKDP++K QR+  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSLLHNLNRNKDPASKAQRLDAS

PNX80228.1 hypothetical protein L195_g036225 [Trifolium pratense]3.0e-0759.68Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS
        MLRR+PTKI VKIEDKEELE+ R+R A AT +T TT+  +SLL   +R +DP+SKA R+  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS

TrEMBL top hitse value%identityAlignment
A0A0A0LFB1 Uncharacterized protein5.7e-1270.15Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALA-----TASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS
        MLRRQP+KI+VKIEDKEELEQ R+RAA A     T +TD TS   SLLHN+NRNKD ASKAQRL  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALA-----TASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS

A0A0A0LI59 Uncharacterized protein6.3e-1174.19Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS
        MLRRQPT IDV+IEDKEELEQLR+R A A       ST SSLLHNL+RNKDPASKAQRL  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS

A0A200R928 Anaphase-promoting complex2.9e-0855.38Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSLLHNLNRNKDPASKAQRLDAS
        MLRR+P+KI+VKIEDKEELE+ R+R+  ++A+T TT+T    ++L+H L+RNKDP++K QR+  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTN---SSLLHNLNRNKDPASKAQRLDAS

A0A2K3LNW2 Uncharacterized protein1.5e-0759.68Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS
        MLRR+PTKI VKIEDKEELE+ R+R A AT +T TT+  +SLL   +R +DP+SKA R+  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS

A0A371EQJ7 Uncharacterized protein (Fragment)4.2e-0756.92Show/hide
Query:  MLRRQPTKIDVKIEDKEELEQLRQR---AALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS
        MLRR+P+KI+VKIEDKEELE+ R+R   AA  T +T TT+  S+LL  L+R +DP+SKA R+  S
Subjt:  MLRRQPTKIDVKIEDKEELEQLRQR---AALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCGCCGCCCTCGCCACCGCCTCCACTGACACAACCTC
CACCAACTCCTCTCTCCTCCATAACCTCAATCGCAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGTGGAAGGC
TACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAAAAGTTGTATGCTTGCGAAGACCGTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAGAAGACAACCCACCAAGATCGATGTCAAAATCGAGGATAAGGAAGAACTCGAACAACTCCGACAACGCGCCGCCCTCGCCACCGCCTCCACTGACACAACCTC
CACCAACTCCTCTCTCCTCCATAACCTCAATCGCAACAAAGACCCGGCCTCCAAAGCTCAGCGACTCGACGCTTCTGATCGACGTCGTTTGTTGAAGAGTCGTGGAAGGC
TACTGCTAATTCTGCGATCTTTCGATCGGAGAAGCTTCCATTCTGAAGAAAAGTTGTATGCTTGCGAAGACCGTTTCTGA
Protein sequenceShow/hide protein sequence
MLRRQPTKIDVKIEDKEELEQLRQRAALATASTDTTSTNSSLLHNLNRNKDPASKAQRLDASDRRRLLKSRGRLLLILRSFDRRSFHSEEKLYACEDRF