CuGenDBv2

Gene ID	Clc11G03880
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Unknown protein
Genome location	ClcChr11:3704551..3705503
RNA-Seq Expression	Clc11G03880
Synteny	Clc11G03880
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008456814.1 PREDICTED: uncharacterized protein LOC103496651 [Cucumis melo]

2.9e-75

79.79

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPNFNHDD +CSGRRRRSA+VG+KANRQ N+ RSR  E ST AK+++K+L+MGQVKIL
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGV---GDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFL
        +RGE LTP  GV   G G DSCGKRRLESK E+VD+VLGSTDRLGPDPDLMQKQ+VLTEFK  DG+YAGSGAFFASPPPSSVPLPSF+
Subjt:  RRGETLTPDPGV---GDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFL

XP_011648719.1 uncharacterized protein LOC105434545 [Cucumis sativus]

1.1e-74

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPN NHD  +CSGRRRRSA+VG+KANRQ N+ RSR  E ST AK+++++L+MGQVKIL
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGVG-DGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSF
        +RGE LTPD GVG  GDDSCGKRRLESKGE+VD+VLGSTDRLGPD DLMQKQ+VLT+FK  DG+YAGSGAFFASPPPSSVPLPSF
Subjt:  RRGETLTPDPGVG-DGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSF

XP_022143251.1 uncharacterized protein LOC111013161 [Momordica charantia]

2.8e-70

77.89

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPST----AAKISSKNLIMGQ
        MATVILPPQDCLG GLR QGLVLS PLKSRRNS PN  SSSTNPNFNHD    SGRRRRS AVG+K+NRQ N+GRSR+GEPST    AAK+S K L+MGQ
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPST----AAKISSKNLIMGQ

Query:  VKILRRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLG
        VKIL+RGE LTPD GVG  D  CGKRRLE K +D+D+ LGSTDRLGPDPDLMQKQ+V +E KV DGIYAGSGAFFASPPPSSVPLPSFLG
Subjt:  VKILRRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLG

XP_022937911.1 uncharacterized protein LOC111444161 [Cucurbita moschata]

1.1e-69

79.14

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Query:  TVILPPQDCLGKGLRHQGLVL-SPPLKSRRNSNP-NSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        TVIL PQDCLG GLRHQGLVL SPPLKSRRNSN  +S SSS NPNFN DD TCSG RRRS+ VG+KANR+VN+GRSR  E STAAKIS KNL+MGQVKIL
Subjt:  TVILPPQDCLGKGLRHQGLVL-SPPLKSRRNSNP-NSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGR
        +RGE L PD GVGDG    GKR LESK ED+D+VLGSTDRLGPDPDLMQKQ+V +E KV DGIYAGSGAFFASPPPSSVPLPSFLG+
Subjt:  RRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGR

XP_038890387.1 uncharacterized protein LOC120079968 [Benincasa hispida]

4.4e-92

92.51

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        MATVILPPQDCLGKG RHQGLVLSPPLKSRRNSNP+S SSSTNPNFNHDDTTCSGRRRRSAAVG+KANRQVN+GRSRA EPST AKISSKNLIMGQVKIL
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGR
        +RGETLTPD GVGDG+DSCGKRRLESKG+DVD+VLGSTDRLGPDPDLMQKQ+VLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLG+
Subjt:  RRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LG41 Uncharacterized protein

5.3e-75

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPN NHD  +CSGRRRRSA+VG+KANRQ N+ RSR  E ST AK+++++L+MGQVKIL
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGVG-DGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSF
        +RGE LTPD GVG  GDDSCGKRRLESKGE+VD+VLGSTDRLGPD DLMQKQ+VLT+FK  DG+YAGSGAFFASPPPSSVPLPSF
Subjt:  RRGETLTPDPGVG-DGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSF

A0A1S3C5D8 uncharacterized protein LOC103496651

1.4e-75

79.79

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPNFNHDD +CSGRRRRSA+VG+KANRQ N+ RSR  E ST AK+++K+L+MGQVKIL
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGV---GDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFL
        +RGE LTP  GV   G G DSCGKRRLESK E+VD+VLGSTDRLGPDPDLMQKQ+VLTEFK  DG+YAGSGAFFASPPPSSVPLPSF+
Subjt:  RRGETLTPDPGV---GDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFL

A0A5A7VCB7 Uncharacterized protein

1.4e-75

79.79

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        MATVILPPQDCLGKGLRHQGLVLS PL SRRNSNPNS S+S+NPNFNHDD +CSGRRRRSA+VG+KANRQ N+ RSR  E ST AK+++K+L+MGQVKIL
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGV---GDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFL
        +RGE LTP  GV   G G DSCGKRRLESK E+VD+VLGSTDRLGPDPDLMQKQ+VLTEFK  DG+YAGSGAFFASPPPSSVPLPSF+
Subjt:  RRGETLTPDPGV---GDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFL

A0A6J1CPP9 uncharacterized protein LOC111013161

1.4e-70

77.89

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPST----AAKISSKNLIMGQ
        MATVILPPQDCLG GLR QGLVLS PLKSRRNS PN  SSSTNPNFNHD    SGRRRRS AVG+K+NRQ N+GRSR+GEPST    AAK+S K L+MGQ
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPST----AAKISSKNLIMGQ

Query:  VKILRRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLG
        VKIL+RGE LTPD GVG  D  CGKRRLE K +D+D+ LGSTDRLGPDPDLMQKQ+V +E KV DGIYAGSGAFFASPPPSSVPLPSFLG
Subjt:  VKILRRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLG

A0A6J1FBP4 uncharacterized protein LOC111444161

5.1e-70

79.14

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Query:  TVILPPQDCLGKGLRHQGLVL-SPPLKSRRNSNP-NSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL
        TVIL PQDCLG GLRHQGLVL SPPLKSRRNSN  +S SSS NPNFN DD TCSG RRRS+ VG+KANR+VN+GRSR  E STAAKIS KNL+MGQVKIL
Subjt:  TVILPPQDCLGKGLRHQGLVL-SPPLKSRRNSNP-NSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKIL

Query:  RRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGR
        +RGE L PD GVGDG    GKR LESK ED+D+VLGSTDRLGPDPDLMQKQ+V +E KV DGIYAGSGAFFASPPPSSVPLPSFLG+
Subjt:  RRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G02040.1 unknown protein

2.0e-10

34.23

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Query:  SSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKILRRGETLTPDPGVGDGDDSCGKRRLESKG-EDVDMVLGST
        SS N  F H        + R       A R+  +  +    P+     ++ NL+M QVKIL+RGETL+      +   S   RR   K  +DVD+++ +T
Subjt:  SSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKILRRGETLTPDPGVGDGDDSCGKRRLESKG-EDVDMVLGST

Query:  DRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFA-SPPPSSVPLPSFLG
        +R+GP+P+++ KQI         G+ + +GA  + SPPPS VP+P FLG
Subjt:  DRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFA-SPPPSSVPLPSFLG

AT4G32020.1 unknown protein

2.1e-07

28.57

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Query:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRR---RRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLI-MGQ
        M   +L PQDCL     H           +++ NP++  +      +++ T  S  R    RS++  +       +    A  P    K S  N + + Q
Subjt:  MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRR---RRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLI-MGQ

Query:  VKILRRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMV-LGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSF
        V+IL+RGE +                  E+    V+M  LGST R+GPDP L+  QI L+  K     +        SPPPS VPLP+F
Subjt:  VKILRRGETLTPDPGVGDGDDSCGKRRLESKGEDVDMV-LGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSF

Sequences

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CDS sequence

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ATGGCTACCGTGATTCTTCCGCCGCAGGACTGTCTTGGGAAAGGCCTTCGCCACCAAGGTCTAGTTCTATCGCCTCCGTTAAAATCACGGCGAAATTCTAACCCTAATAG
TATTAGTTCTTCCACAAACCCTAACTTCAATCATGACGATACGACTTGTTCCGGCAGACGGAGGAGAAGTGCAGCGGTGGGAATTAAGGCTAACCGTCAAGTCAATAAAG
GACGGAGCCGGGCGGGAGAGCCGTCTACAGCGGCGAAAATTTCGTCGAAGAATTTGATTATGGGACAGGTTAAGATCCTAAGGCGTGGAGAGACGTTGACTCCCGATCCA
GGAGTTGGTGATGGTGATGATTCTTGTGGTAAAAGGAGATTGGAGTCGAAGGGTGAGGATGTGGATATGGTTTTGGGATCCACTGATCGGTTGGGTCCAGACCCTGATTT
GATGCAGAAGCAGATTGTGTTAACGGAGTTCAAGGTTGTTGATGGTATCTATGCGGGATCGGGTGCGTTCTTCGCTTCGCCGCCTCCGAGTTCGGTGCCCTTGCCGTCTT
TTCTAGGAAGATGTTTGAGTTTGCGAGCAGATGAACTGGCTGAAGTGAAGCAACATGACAGTTCTTCTAGGTTTATATTACTCAGAACGATTAGGGTTTATAGGTGGGGT
TTCTTCTATATAGCTAATATAGCTGTTTCAGCTTCCCTATGTAGTGGGTTTTTGTTGGTGGCTTGGTGTGTGTTTTCTTAG

mRNA sequence

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Protein sequence

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MATVILPPQDCLGKGLRHQGLVLSPPLKSRRNSNPNSISSSTNPNFNHDDTTCSGRRRRSAAVGIKANRQVNKGRSRAGEPSTAAKISSKNLIMGQVKILRRGETLTPDP
GVGDGDDSCGKRRLESKGEDVDMVLGSTDRLGPDPDLMQKQIVLTEFKVVDGIYAGSGAFFASPPPSSVPLPSFLGRCLSLRADELAEVKQHDSSSRFILLRTIRVYRWG
FFYIANIAVSASLCSGFLLVAWCVFS

Clc11G03880 (gene) of Watermelon (cordophanus) v2 genome