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Clc11G03930 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G03930
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR21-like
Genome locationClcChr11:3757969..3760570
RNA-Seq ExpressionClc11G03930
SyntenyClc11G03930
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649278.1 auxin-responsive protein SAUR21 [Cucumis sativus]2.5e-4696.91Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_016902145.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]2.1e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVDLLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_022146171.1 auxin-responsive protein SAUR21-like [Momordica charantia]2.1e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKG+IAVYVGEIQR +FVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_038901157.1 auxin-responsive protein SAUR21-like [Benincasa hispida]5.5e-4695.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVDLLN+SEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_038901158.1 auxin-responsive protein SAUR21-like [Benincasa hispida]1.6e-4593.81Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKGHIAVYVGEIQR +FV+PISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCRED FINLTAR+HTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM74 Uncharacterized protein3.0e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQILKMQAMSARNQ DVPKGHIAVYVGEIQR +FVVPISYLK+PSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A1S4E2E4 auxin-responsive protein SAUR21-like1.0e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVDLLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A5A7TQ57 Auxin-responsive protein SAUR21-like1.0e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQR +FVVPISYLKHPSFVDLLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A5D3BIN4 Auxin-responsive protein SAUR21-like3.0e-4594.85Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQ+LKMQAMSARNQSDVPKG+IAVYVGEIQR +FVVPISYLKHPSFVDLL RSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A6J1CYI0 auxin-responsive protein SAUR21-like1.0e-4595.88Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPSILLNAKQILKMQAMSARNQSDVPKG+IAVYVGEIQR +FVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR233.1e-2363.22Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH
        LL AK+IL   + SA   S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RLH
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH

Q9FJF9 Auxin-responsive protein SAUR211.2e-2261.63Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL     SA      PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

Q9FJG0 Auxin-responsive protein SAUR201.5e-2262.35Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTAR
        LL AK+IL     +A   S  PKG +AVYVGE Q+ +++VPISYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+R
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTAR

Q9FJG1 Auxin-responsive protein SAUR198.9e-2361.63Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL   + S    S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

Q9FK62 Auxin-responsive protein SAUR242.0e-2261.63Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL   + S    S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.3e-2657.14Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGE-IQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        M IR+  +L ++KQ+LK  + S+ N + +PKGH+AVYVGE +Q+ +FVVP++YL HP F  LL ++EEEFGF HPMGGLTIPC E  FI+L +RL TS
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSDVPKGHIAVYVGE-IQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

AT4G34810.1 SAUR-like auxin-responsive protein family7.5e-2554.46Show/hide
Query:  MGIRLPSILLNAKQILKMQAMSARNQSD------VPKGHIAVYVG---EIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT
        MG+   +I    KQILK+ +++ RN++       VPKGH+AVYVG   E+++ +FVVPIS+L HPSF + L+R+EEEFGF HPMGGLTIPCRE+ F++L 
Subjt:  MGIRLPSILLNAKQILKMQAMSARNQSD------VPKGHIAVYVG---EIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT

Query:  A
        A
Subjt:  A

AT4G38840.1 SAUR-like auxin-responsive protein family1.8e-2655.56Show/hide
Query:  MGIRLPSILLNAKQILK----MQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH
        M IR+P +L ++KQIL+    + + S+ +  DVPKG++AVYVGE    +FVVP+SYL  PSF DLL ++EEEFGF HPMGGLTIPC E+ FI+L +R +
Subjt:  MGIRLPSILLNAKQILK----MQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH

AT5G18010.1 SAUR-like auxin-responsive protein family6.3e-2461.63Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL   + S    S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

AT5G18060.1 SAUR-like auxin-responsive protein family2.2e-2463.22Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH
        LL AK+IL   + SA   S  PKG +AVYVGE Q+ +++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RLH
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTGGATGGAAAAATCTGAAAAATCTGAAAATGTCTTGGAAAGACAGCACCAAGAAGCATTAAGACGAGCAATCTCAAATCGATCCCTCCAAGCAGTGACTTTTCA
TGAAAAACGCGCCGAAGTGAACTTTGCTGTTGTGAAGAAAACTGCTTACCAAGACTCATACCAAGAAGCGTACTATGGCCCTGTTGTTGAACATGCTGGAGACGCTGCAA
GAACTTCTCCCTCTGATCTGGAACAATATCTGATTTCTTCATGTCAAAACCCGCTTGCATCTTTAGAATGTTTGGCATTAGGAATCAGAGATGATGGCCAACAAATCGCC
ATTCCAACATATCCATGTGATTGGACCTCCTTGCAAGAGGAAATTGCTTCATCAATGGACCCAGCTTCTAGGTCCACTAATGGAGCACTTAATGAGAATTGGAGAGTCAC
ATGGTATGTTGCTACTCATTTGACAAACTTGATGAAACTTTCTTGGCCTCTTTTTATTGGAAAAAGTGGGACCAGTCAGAAAGCAAATGAAATTCTAATGCATAGAACAA
AACCATATATGGGAATCCGTTTGCCATCAATTCTTCTTAATGCCAAGCAAATTCTGAAAATGCAAGCTATGTCGGCCAGAAATCAATCTGACGTTCCCAAAGGCCATATT
GCAGTTTATGTGGGAGAGATTCAAAGGACGAAATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTCGTAGATCTGCTTAATAGATCAGAAGAAGAATTTGGATT
TTGCCATCCAATGGGTGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTGGATGGAAAAATCTGAAAAATCTGAAAATGTCTTGGAAAGACAGCACCAAGAAGCATTAAGACGAGCAATCTCAAATCGATCCCTCCAAGCAGTGACTTTTCA
TGAAAAACGCGCCGAAGTGAACTTTGCTGTTGTGAAGAAAACTGCTTACCAAGACTCATACCAAGAAGCGTACTATGGCCCTGTTGTTGAACATGCTGGAGACGCTGCAA
GAACTTCTCCCTCTGATCTGGAACAATATCTGATTTCTTCATGTCAAAACCCGCTTGCATCTTTAGAATGTTTGGCATTAGGAATCAGAGATGATGGCCAACAAATCGCC
ATTCCAACATATCCATGTGATTGGACCTCCTTGCAAGAGGAAATTGCTTCATCAATGGACCCAGCTTCTAGGTCCACTAATGGAGCACTTAATGAGAATTGGAGAGTCAC
ATGGTATGTTGCTACTCATTTGACAAACTTGATGAAACTTTCTTGGCCTCTTTTTATTGGAAAAAGTGGGACCAGTCAGAAAGCAAATGAAATTCTAATGCATAGAACAA
AACCATATATGGGAATCCGTTTGCCATCAATTCTTCTTAATGCCAAGCAAATTCTGAAAATGCAAGCTATGTCGGCCAGAAATCAATCTGACGTTCCCAAAGGCCATATT
GCAGTTTATGTGGGAGAGATTCAAAGGACGAAATTTGTAGTCCCTATATCATACTTGAAGCATCCTTCTTTCGTAGATCTGCTTAATAGATCAGAAGAAGAATTTGGATT
TTGCCATCCAATGGGTGGCTTGACGATTCCGTGCAGAGAAGATGCTTTCATAAATCTCACTGCTAGGCTGCACACGTCATGA
Protein sequenceShow/hide protein sequence
MSWMEKSEKSENVLERQHQEALRRAISNRSLQAVTFHEKRAEVNFAVVKKTAYQDSYQEAYYGPVVEHAGDAARTSPSDLEQYLISSCQNPLASLECLALGIRDDGQQIA
IPTYPCDWTSLQEEIASSMDPASRSTNGALNENWRVTWYVATHLTNLMKLSWPLFIGKSGTSQKANEILMHRTKPYMGIRLPSILLNAKQILKMQAMSARNQSDVPKGHI
AVYVGEIQRTKFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS