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Clc11G03940 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G03940
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR21-like
Genome locationClcChr11:3761366..3763101
RNA-Seq ExpressionClc11G03940
SyntenyClc11G03940
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011649278.1 auxin-responsive protein SAUR21 [Cucumis sativus]1.4e-4696.91Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQ+LKMQAMSARNQSDVPKGHIAVYVG+IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_016902145.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.2e-4595.88Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQILKMQAMSARNQSDVPKGHIAVYVG+IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_022146171.1 auxin-responsive protein SAUR21-like [Momordica charantia]1.2e-4595.88Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQILKMQAMSARNQSDVPKG+IAVYVG+IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_038901157.1 auxin-responsive protein SAUR21-like [Benincasa hispida]3.1e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQ+LKMQAMSARNQSDVPKGHIAVYVG+IQRKRFVVPISYLKHPSFVDLLN+SEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

XP_038901158.1 auxin-responsive protein SAUR21-like [Benincasa hispida]9.1e-4693.81Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQ+LKMQAMSARNQSDVPKGHIAVYVG+IQRKRFV+PISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCRED FINLTAR+HTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

TrEMBL top hitse value%identityAlignment
A0A0A0LM74 Uncharacterized protein1.7e-4595.88Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQILKMQAMSARNQ DVPKGHIAVYVG+IQRKRFVVPISYLK+PSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A1S4E2E4 auxin-responsive protein SAUR21-like5.7e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQILKMQAMSARNQSDVPKGHIAVYVG+IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A5A7TQ57 Auxin-responsive protein SAUR21-like5.7e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQILKMQAMSARNQSDVPKGHIAVYVG+IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHP GGLTIPCREDAFINLTA+LHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A5D3BIN4 Auxin-responsive protein SAUR21-like1.7e-4594.85Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQ+LKMQAMSARNQSDVPKG+IAVYVG+IQRKRFVVPISYLKHPSFVDLL RSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

A0A6J1CYI0 auxin-responsive protein SAUR21-like5.7e-4695.88Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        MGIRLPS+LLNAKQILKMQAMSARNQSDVPKG+IAVYVG+IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT+RLHTS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR231.0e-2364.37Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH
        LL AK+IL   + SA   S  PKG +AVYVG+ Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RLH
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH

Q9FJF9 Auxin-responsive protein SAUR213.9e-2362.79Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL     SA      PKG +AVYVG+ Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

Q9FJG0 Auxin-responsive protein SAUR203.9e-2363.53Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTAR
        LL AK+IL     +A   S  PKG +AVYVG+ Q+KR++VPISYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+R
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTAR

Q9FJG1 Auxin-responsive protein SAUR193.0e-2362.79Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL   + S    S  PKG +AVYVG+ Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

Q9FK62 Auxin-responsive protein SAUR246.6e-2362.79Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL   + S    S  PKG +AVYVG+ Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family3.8e-2657.14Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGK-IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS
        M IR+  +L ++KQ+LK  + S+ N + +PKGH+AVYVG+ +Q++RFVVP++YL HP F  LL ++EEEFGF HPMGGLTIPC E  FI+L +RL TS
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHIAVYVGK-IQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS

AT4G34810.1 SAUR-like auxin-responsive protein family4.2e-2554.46Show/hide
Query:  MGIRLPSLLLNAKQILKMQAMSARNQSD------VPKGHIAVYVG---KIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT
        MG+   ++    KQILK+ +++ RN++       VPKGH+AVYVG   ++++KRFVVPIS+L HPSF + L+R+EEEFGF HPMGGLTIPCRE+ F++L 
Subjt:  MGIRLPSLLLNAKQILKMQAMSARNQSD------VPKGHIAVYVG---KIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLT

Query:  A
        A
Subjt:  A

AT4G38840.1 SAUR-like auxin-responsive protein family1.3e-2656.57Show/hide
Query:  MGIRLPSLLLNAKQILK----MQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH
        M IR+P +L ++KQIL+    + + S+ +  DVPKG++AVYVG+   KRFVVP+SYL  PSF DLL ++EEEFGF HPMGGLTIPC E+ FI+L +R +
Subjt:  MGIRLPSLLLNAKQILK----MQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH

AT5G18010.1 SAUR-like auxin-responsive protein family2.1e-2462.79Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL
        LL AK+IL   + S    S  PKG +AVYVG+ Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RL
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARL

AT5G18060.1 SAUR-like auxin-responsive protein family7.2e-2564.37Show/hide
Query:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH
        LL AK+IL   + SA   S  PKG +AVYVG+ Q+KR++VP+SYL  PSF  LL++SEEEFGF HPMGGLTIPC ED FIN+T+RLH
Subjt:  LLNAKQILKMQAMSARNQSDVPKGHIAVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATAATAGCCAAATATTCACTTCTACAGTTCAGAGAGCAATTAACAACAGAATATCAAATAGAAATTCAGTAACAATGAAACTCATTTACATTCCAAAAGGC
TTGAGATTGTATTCCTACACAACATTCAAGCAGAAGTTAGAAAGAAATCAAATCAGAAGAAAAAAAATGTGTACAAAATTGATTGATGCCCATTCCATCATCTTC
ATCCTTCAAGACTGTTGCAGTCTAGAAGTAAGATCGATGAAGGCGCCTTCTTTGCAAGGAATTGTCAGACCTCCATGTGGACAATGGCCAATTTGTAATCCAATT
TCCAAACCGCACCATGCTTTTTCCAATGGAATAACAAACCAAAACAGATGGCTTTCTTGGTTTGTTGAGTTCATGCATATCATGTCCACCAACGTACTCTCAGCC
ACTGCAATATGTCCACTAATGGCTTATATTGAGGATTGGAGAGTATCACATGGCATGTTGCTTGGTGAAATTTTCTTGGCCTCTTGTTATTGGAAAAGTAGGGCC
AATATGGGAATCCGTTTGCCATCGCTTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTATGTCGGCCAGAAATCAATCTGACGTTCCCAAAGGCCATATT
GCAGTTTATGTGGGAAAGATTCAAAGGAAGAGATTTGTAGTCCCTATATCATATTTGAAGCATCCTTCTTTCGTAGATCTGCTCAATAGATCAGAAGAAGAATTT
GGATTTTGCCATCCAATGGGCGGCTTGACGATTCCTTGCAGAGAAGATGCTTTCATAAACCTCACTGCTAGGCTACACACGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTATAATAGCCAAATATTCACTTCTACAGTTCAGAGAGCAATTAACAACAGAATATCAAATAGAAATTCAGTAACAATGAAACTCATTTACATTCCAAAAGGC
TTGAGATTGTATTCCTACACAACATTCAAGCAGAAGTTAGAAAGAAATCAAATCAGAAGAAAAAAAATGTGTACAAAATTGATTGATGCCCATTCCATCATCTTC
ATCCTTCAAGACTGTTGCAGTCTAGAAGTAAGATCGATGAAGGCGCCTTCTTTGCAAGGAATTGTCAGACCTCCATGTGGACAATGGCCAATTTGTAATCCAATT
TCCAAACCGCACCATGCTTTTTCCAATGGAATAACAAACCAAAACAGATGGCTTTCTTGGTTTGTTGAGTTCATGCATATCATGTCCACCAACGTACTCTCAGCC
ACTGCAATATGTCCACTAATGGCTTATATTGAGGATTGGAGAGTATCACATGGCATGTTGCTTGGTGAAATTTTCTTGGCCTCTTGTTATTGGAAAAGTAGGGCC
AATATGGGAATCCGTTTGCCATCGCTTCTTCTTAATGCCAAGCAGATTCTGAAAATGCAAGCTATGTCGGCCAGAAATCAATCTGACGTTCCCAAAGGCCATATT
GCAGTTTATGTGGGAAAGATTCAAAGGAAGAGATTTGTAGTCCCTATATCATATTTGAAGCATCCTTCTTTCGTAGATCTGCTCAATAGATCAGAAGAAGAATTT
GGATTTTGCCATCCAATGGGCGGCTTGACGATTCCTTGCAGAGAAGATGCTTTCATAAACCTCACTGCTAGGCTACACACGTCATGA
Protein sequenceShow/hide protein sequence
MYNSQIFTSTVQRAINNRISNRNSVTMKLIYIPKGLRLYSYTTFKQKLERNQIRRKKMCTKLIDAHSIIFILQDCCSLEVRSMKAPSLQGIVRPPCGQWPICNPI
SKPHHAFSNGITNQNRWLSWFVEFMHIMSTNVLSATAICPLMAYIEDWRVSHGMLLGEIFLASCYWKSRANMGIRLPSLLLNAKQILKMQAMSARNQSDVPKGHI
AVYVGKIQRKRFVVPISYLKHPSFVDLLNRSEEEFGFCHPMGGLTIPCREDAFINLTARLHTS