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Clc11G04030 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04030
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:3798410..3800807
RNA-Seq ExpressionClc11G04030
SyntenyClc11G04030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571061.1 hypothetical protein SDJN03_29976, partial [Cucurbita argyrosperma subsp. sororia]3.8e-1176.79Show/hide
Query:  NCNQALFSSF--HEMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
        N + AL S F       LEVTSMKASSLQ MVNPPVGWLNPNSSSALLSKSKNEGW
Subjt:  NCNQALFSSF--HEMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
KAG6605012.1 hypothetical protein SDJN03_02329, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1046.74Show/hide
Query:  QNCNQALFSSFHEMCI-----LEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGWFKNTGLTSPRNGMCFENFLGTKENRWYTKSHV
        ++C   LF+ F+   +     LEV   KASSL G+V PP+GW NPNSSS LLSKS  EG F           + F+N LG K+NRW T+SH+
Subjt:  QNCNQALFSSFHEMCI-----LEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGWFKNTGLTSPRNGMCFENFLGTKENRWYTKSHV
TrEMBL top hitse value%identityAlignment
A0A6J1JHD6 uncharacterized protein LOC111484388 isoform X28.2e-0460.47Show/hide
Query:  EMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
        E  I ++       +  MVNPPVGWL PNSSSALLS SKNEGW
Subjt:  EMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATGGAAAGTGAGAAAGGAGAGAAGACAAGAACAAACAACTCGACGACACGTGTCGATGACAACCTGCTTCATCAAATATTCACATGGGTTAATCAAGTGATTGA
AGTACAATCATTTTCAAATTTGATCCAAATTTTGAAAAAGAATGAAAAAAGTTGTCAAAACTGCAACCAGGCTTTGTTCTCAAGCTTTCATGAAATGTGCATTCTAGAAG
TGACATCAATGAAGGCTTCTTCTTTGCAAGGAATGGTCAACCCTCCTGTTGGATGGTTGAATCCAAACTCTTCTTCAGCCCTCCTTAGCAAGTCTAAGAATGAAGGATGG
TTCAAGAACACTGGATTGACATCTCCCAGAAATGGAATGTGTTTTGAAAATTTTCTTGGCACTAAAGAGAATAGATGGTATACGAAATCCCATGTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATGGAAAGTGAGAAAGGAGAGAAGACAAGAACAAACAACTCGACGACACGTGTCGATGACAACCTGCTTCATCAAATATTCACATGGGTTAATCAAGTGATTGA
AGTACAATCATTTTCAAATTTGATCCAAATTTTGAAAAAGAATGAAAAAAGTTGTCAAAACTGCAACCAGGCTTTGTTCTCAAGCTTTCATGAAATGTGCATTCTAGAAG
TGACATCAATGAAGGCTTCTTCTTTGCAAGGAATGGTCAACCCTCCTGTTGGATGGTTGAATCCAAACTCTTCTTCAGCCCTCCTTAGCAAGTCTAAGAATGAAGGATGG
TTCAAGAACACTGGATTGACATCTCCCAGAAATGGAATGTGTTTTGAAAATTTTCTTGGCACTAAAGAGAATAGATGGTATACGAAATCCCATGTCTAA
Protein sequenceShow/hide protein sequence
MDMESEKGEKTRTNNSTTRVDDNLLHQIFTWVNQVIEVQSFSNLIQILKKNEKSCQNCNQALFSSFHEMCILEVTSMKASSLQGMVNPPVGWLNPNSSSALLSKSKNEGW
FKNTGLTSPRNGMCFENFLGTKENRWYTKSHV