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Clc11G04040 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04040
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR23-like
Genome locationClcChr11:3800161..3800975
RNA-Seq ExpressionClc11G04040
SyntenyClc11G04040
Gene Ontology termsGO:0009733 - response to auxin (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651887.1 hypothetical protein Csa_006423 [Cucumis sativus]3.9e-4490.72Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MGFR+PSILFSAK+I K  SISGRCQSSVPKGHIAVYVGEIQ+ RFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR+H S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

XP_004147010.1 auxin-responsive protein SAUR23 [Cucumis sativus]3.9e-4490.72Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MGFR+PSILFSAK+I K  SISGRCQSSVPKGHIAVYVGEIQ+ RFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR+H S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

XP_008457631.1 PREDICTED: auxin-responsive protein SAUR23-like [Cucumis melo]1.0e-4490.72Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MGFR+PSILFSAK+I K  SISGRCQSSVPKGHIAVYVGE+Q+TRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR+H S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

XP_022944373.1 auxin-responsive protein SAUR22-like [Cucurbita moschata]2.5e-3881.44Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MG R+PS+LFSAK+I KT S+S R QS+VPKGHIAVYVGEIQR RFLVPISYLNHPSF++LL RAEEEFGFNHPTGGLTIPC EEAFIDVTSR++ S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

XP_038900835.1 auxin-responsive protein SAUR23-like [Benincasa hispida]9.7e-4388.66Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MGFR+PSILFS K+I +T SISGR QSSVPKGHI VYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGF+HPTGGLTIPCKEEAFIDVTSR+H S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

TrEMBL top hitse value%identityAlignment
A0A0A0LIZ4 Uncharacterized protein1.9e-4490.72Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MGFR+PSILFSAK+I K  SISGRCQSSVPKGHIAVYVGEIQ+ RFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR+H S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

A0A1S3C783 auxin-responsive protein SAUR23-like5.0e-4590.72Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MGFR+PSILFSAK+I K  SISGRCQSSVPKGHIAVYVGE+Q+TRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR+H S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

A0A5A7TQ48 Auxin-responsive protein SAUR23-like5.0e-4590.72Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MGFR+PSILFSAK+I K  SISGRCQSSVPKGHIAVYVGE+Q+TRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR+H S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

A0A6J1FXZ9 auxin-responsive protein SAUR22-like1.2e-3881.44Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MG R+PS+LFSAK+I KT S+S R QS+VPKGHIAVYVGEIQR RFLVPISYLNHPSF++LL RAEEEFGFNHPTGGLTIPC EEAFIDVTSR++ S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

A0A6J1J8E2 auxin-responsive protein SAUR22-like3.5e-3880.41Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        MG R+PS+LFSAK+I KT S+S + QS+VPKGHIAVYVGEIQR RFLVPISYLNHPSF++LL RAEEEFGFNHPTGGLTIPC EEAFIDVTSR++ S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR236.2e-2462.07Show/hide
Query:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMH
        L  AKKI    S S    S+ PKG +AVYVGE Q+ R+LVP+SYLN PSF  LL ++EEEFGF+HP GGLTIPC E+ FI+VTSR+H
Subjt:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMH

Q9FJF7 Auxin-responsive protein SAUR228.9e-2360.47Show/hide
Query:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM
        L  AKKI    S S    S+ PKG +AVYVGE Q+ R+LVP+SYLN PSF  LL ++E+EFGF+HP GGLTIPC E+ FI+VTSR+
Subjt:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM

Q9FJG0 Auxin-responsive protein SAUR203.1e-2363.53Show/hide
Query:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR
        L  AKKI    S S    S+ PKG +AVYVGE Q+ R+LVPISYLN PSF  LL ++EEEFGF+HP GGLTIPC E+ FI+VTSR
Subjt:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSR

Q9FJG1 Auxin-responsive protein SAUR198.9e-2359.3Show/hide
Query:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM
        L  AKKI    + +G   S+ PKG +AVYVGE Q+ R+LVP+SYL+ PSF  LL ++EEEFGF HP GGLTIPC E+ FI+VTSR+
Subjt:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM

Q9FK62 Auxin-responsive protein SAUR241.8e-2360.47Show/hide
Query:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM
        L  AKKI    + +G   S+ PKG +AVYVGE Q+ R+LVP+SYLN PSF  LL ++EEEFGF+HP GGLTIPC E+ FI+VTSR+
Subjt:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family1.4e-2656.12Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGE-IQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS
        M  RI  +L S+K++ K+ S S     ++PKGH+AVYVGE +Q+ RF+VP++YL+HP F  LLR+AEEEFGF+HP GGLTIPC E+ FID+ SR+  S
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGE-IQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS

AT4G34810.1 SAUR-like auxin-responsive protein family8.8e-2654.81Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSS------VPKGHIAVYVG---EIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFID-V
        MG    +I  + K+I K +S++ R ++S      VPKGH+AVYVG   E+++ RF+VPIS+LNHPSF + L RAEEEFGFNHP GGLTIPC+EE F+D +
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSS------VPKGHIAVYVG---EIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFID-V

Query:  TSRM
         SR+
Subjt:  TSRM

AT4G38840.1 SAUR-like auxin-responsive protein family1.6e-2757.58Show/hide
Query:  MGFRIPSILFSAKKIFKTHSISGRCQSS----VPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMH
        M  RIP +L S+K+I +   +     SS    VPKG++AVYVGE    RF+VP+SYL+ PSF DLLR+AEEEFGF+HP GGLTIPC EE FID+ SR +
Subjt:  MGFRIPSILFSAKKIFKTHSISGRCQSS----VPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMH

AT5G18060.1 SAUR-like auxin-responsive protein family4.4e-2562.07Show/hide
Query:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMH
        L  AKKI    S S    S+ PKG +AVYVGE Q+ R+LVP+SYLN PSF  LL ++EEEFGF+HP GGLTIPC E+ FI+VTSR+H
Subjt:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMH

AT5G18080.1 SAUR-like auxin-responsive protein family1.3e-2460.47Show/hide
Query:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM
        L  AKKI    + +G   S+ PKG +AVYVGE Q+ R+LVP+SYLN PSF  LL ++EEEFGF+HP GGLTIPC E+ FI+VTSR+
Subjt:  LFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTTCGTATACCATCTATTCTCTTTAGTGCCAAGAAAATTTTCAAAACACATTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCTGTATA
TGTGGGAGAAATTCAGAGGACTCGGTTTTTGGTTCCAATTTCTTACTTGAACCATCCTTCATTCTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCATC
CAACAGGAGGGTTGACCATTCCTTGCAAAGAAGAAGCCTTCATTGATGTCACTTCTAGAATGCACATTTCATGA
mRNA sequenceShow/hide mRNA sequence
CCTAAACACCTGTCTTCTATTCTCTGTTCTTATCTATCTCCTCCTTTCTCCTATATATACATACAAAATATACAACTTATCTCCAACTCAAACCTTCTCACACATTCTCA
TTCAAGCAGTACAATTTACCATTCAAAGTCCTTCATTGATCCCTCAGTTCAATCCAATTTAGACATGGGATTTCGTATACCATCTATTCTCTTTAGTGCCAAGAAAATTT
TCAAAACACATTCCATTTCTGGGAGATGTCAATCCAGTGTTCCTAAAGGTCACATCGCTGTATATGTGGGAGAAATTCAGAGGACTCGGTTTTTGGTTCCAATTTCTTAC
TTGAACCATCCTTCATTCTTAGACTTGCTAAGGAGGGCTGAAGAAGAGTTTGGATTCAACCATCCAACAGGAGGGTTGACCATTCCTTGCAAAGAAGAAGCCTTCATTGA
TGTCACTTCTAGAATGCACATTTCATGAAAGCTTGAGAACAAAGCCTGGTTGCAGTTTTGACAACTTTTTTCATTCTTTTTCTGTAGGAGATAGAGTTAAATGTTACTGT
AAAGTAAAATTTGTATATGTAGATGAAATTAGATTTGAAAAGGTGGAGAATTACAAAGCCACTTGAACATCAATGAAAAATATCAATTGCAGTGAAACTAAGATCTTTAT
TTTGCTAACAAAGCCTTGTAAAGAGCTAAAACTGTAACTAAGGCAAATATGAGATATAATACTTTCTGCTTTCCAAAGAAACCAAGAATTTTCATCAACTGAAACTTTTG
ATCTATGAGCAACCTAAGAAGCATGGATACGGATATGCATGACAC
Protein sequenceShow/hide protein sequence
MGFRIPSILFSAKKIFKTHSISGRCQSSVPKGHIAVYVGEIQRTRFLVPISYLNHPSFLDLLRRAEEEFGFNHPTGGLTIPCKEEAFIDVTSRMHIS