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Clc11G04100 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04100
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR21-like
Genome locationClcChr11:3841920..3845507
RNA-Seq ExpressionClc11G04100
SyntenyClc11G04100
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605034.1 Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]8.1e-4083.33Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL +MVNA+QN+RLSSLTT+HGSS IRKGYCAVYVG+SQK+RF+IP+AYLNEPFFKDLL+QVEEEFGY HPMGGLTIPCSD TF+ LISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

KGN61865.1 hypothetical protein Csa_006212 [Cucumis sativus]8.7e-4288.54Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL RMVN +QNIRLSSLTT+HGSS IRKGYCAVYVGE+QK+RFVIPIAYLNEPFFKDLLSQV EEFGY+HPMGGLTIPCS+DTFMDLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

XP_008457943.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]3.5e-4391.67Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL RMVNAVQNIRLSSLTT+HGSS IRKGYCAVYVGESQK+RFVIPIAYLN+PFFKDLLSQV EEFGY+HPMGGLTIPCSDDTFMDLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

XP_022146118.1 auxin-responsive protein SAUR24-like [Momordica charantia]2.8e-4082.29Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL R+VNAVQ+++LSSLTTNHGSS +R+GYCAVYVGESQK+RFVIP+AYLNEP F+DLLSQ EEE+GY+HPMGGLTIPCSDDTF+DLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

XP_038902470.1 auxin-induced protein 15A-like [Benincasa hispida]1.1e-4493.75Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRLARMVNAVQNIRLSSLTT+HGSS IRKGYCAVYVGESQK+RFVIP+AYLNEPFFKDLLSQVEEEFGY+HPMGGLTIPCSDDTFMDLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

TrEMBL top hitse value%identityAlignment
A0A0A0LIY4 SAUR family protein4.2e-4288.54Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL RMVN +QNIRLSSLTT+HGSS IRKGYCAVYVGE+QK+RFVIPIAYLNEPFFKDLLSQV EEFGY+HPMGGLTIPCS+DTFMDLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

A0A1S3C683 auxin-responsive protein SAUR21-like1.7e-4391.67Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL RMVNAVQNIRLSSLTT+HGSS IRKGYCAVYVGESQK+RFVIPIAYLN+PFFKDLLSQV EEFGY+HPMGGLTIPCSDDTFMDLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

A0A5D3BN78 Auxin-responsive protein SAUR21-like1.7e-4391.67Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL RMVNAVQNIRLSSLTT+HGSS IRKGYCAVYVGESQK+RFVIPIAYLN+PFFKDLLSQV EEFGY+HPMGGLTIPCSDDTFMDLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

A0A6J1CXQ4 auxin-responsive protein SAUR24-like1.4e-4082.29Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL R+VNAVQ+++LSSLTTNHGSS +R+GYCAVYVGESQK+RFVIP+AYLNEP F+DLLSQ EEE+GY+HPMGGLTIPCSDDTF+DLISRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

A0A6J1CYP6 auxin-responsive protein SAUR21-like5.9e-3677.08Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRLA++VNAVQN+ LSSLT  HGSS IRKG  A+YVGES++ RFVIPIAYL+ P+FKDLLSQ EEEFGY HPMGGLTIPC+DDTF+DL+SRLN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG71.4e-2156Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPI---RKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLNDQ
        MGFRL         IR +    N  SS +    KGY AVYVGE+ K RFVIP+++LN+P F+DLLSQ EEEFGY HPMGGLTIPCS+D F  + S L+ Q
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPI---RKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLNDQ

P33079 Auxin-induced protein 10A57.9e-2254.08Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSS--PIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFR+A +V      R S  TT   S    + KGY AVYVG+ + RRF IP++YLNEP F++LLSQ EEEFGY HPMGGLTIPC ++ F+++ + LN+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSS--PIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

P33080 Auxin-induced protein X10A1.6e-2254.55Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSS---PIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND
        MGFRL         IR +S+  N  SS    + KGY  VYVG+ + RRF+IP++YLN+P F+DLL+Q EEEFGY HPMGGLTIPC +D F+ + S LND
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSS---PIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLND

P33083 Auxin-induced protein 6B1.6e-2258.16Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSS---PIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN
        MGFRL         IR +S + N  SS    + KGY AVYVGE + RRFVIP++YLN+P F+DLLSQ EEEFGY HP GGLTIPCS+D F  + S LN
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSS---PIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN

Q9FJG0 Auxin-responsive protein SAUR202.3e-2161.04Show/hide
Query:  LSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISR
        LS  TT   ++P  KG+ AVYVGESQK+R+++PI+YLN+P F+ LLS+ EEEFG+ HPMGGLTIPC +DTF+++ SR
Subjt:  LSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISR

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family4.8e-2251.04Show/hide
Query:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGE-SQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN
        M  R++R++ + + + L SL+ +  +  I KG+ AVYVGE  QKRRFV+P+ YL+ P F+ LL + EEEFG+ HPMGGLTIPC++  F+DL SRL+
Subjt:  MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGE-SQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN

AT4G38840.1 SAUR-like auxin-responsive protein family6.7e-2449.49Show/hide
Query:  MGFRLARMVNAVQNI----RLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN
        M  R+ R++ + + I    +L S +++  S  + KGY AVYVGE   +RFV+P++YL++P F+DLL + EEEFG+ HPMGGLTIPCS++ F+DL SR N
Subjt:  MGFRLARMVNAVQNI----RLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN

AT5G18020.1 SAUR-like auxin-responsive protein family1.6e-2261.04Show/hide
Query:  LSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISR
        LS  TT   ++P  KG+ AVYVGESQK+R+++PI+YLN+P F+ LLS+ EEEFG+ HPMGGLTIPC +DTF+++ SR
Subjt:  LSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISR

AT5G18060.1 SAUR-like auxin-responsive protein family6.2e-2264.62Show/hide
Query:  KGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN
        KG+ AVYVGESQK+R+++P++YLN+P F+ LLS+ EEEFG+ HPMGGLTIPC +DTF+++ SRL+
Subjt:  KGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLN

AT5G18080.1 SAUR-like auxin-responsive protein family2.1e-2258.23Show/hide
Query:  RLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRL
        ++ S +T  GS+   KG+ AVYVGESQK+R+++P++YLN+P F+ LLS+ EEEFG+ HPMGGLTIPC +DTF+++ SRL
Subjt:  RLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTCCGTTTGGCAAGAATGGTAAATGCTGTGCAAAATATTAGACTTTCTTCTCTAACAACAAATCACGGATCGTCACCAATCCGCAAAGGTTATTGTGCAGTTTA
TGTTGGGGAAAGCCAAAAGAGGCGGTTTGTGATTCCTATTGCTTACTTGAATGAGCCATTTTTCAAGGACTTGCTAAGTCAAGTTGAAGAAGAATTTGGTTACAGTCATC
CTATGGGAGGCCTCACTATTCCTTGCAGCGATGACACATTCATGGATCTCATCTCTCGTCTGAATGATCAAAGACTGGTATTGGAGGGTAGCATGGTGGAACAAGATCCT
GTGCTGCAGTCACTCTGGTTTTCTCTTCCATTTAATTACCCTTTGTACTTAGAGCCACATTCATTATCATCGGAACCTTCCTTTGTCATTCAAGAAAACATAATGACATT
AGCTGACAAGAACTTTAATTTCGGAGCTTTCAAGGATATAATAGCTAATAAAGATCTTGTTGTAGGAGACGCGGTAAAGCTTGGAAGCAACACAAGTTTATTTCATGGAT
CTTCTGCTCGACTCCGACAACACATTTCTCTTCAGGAACTACTACATTTGAAGAGGGACCAAACTGTGCGCAGTTACTTTCTTAGCCCTGAGCTCAAGCTGCAAGTTGGA
AGACAGAGCCATGTGAAGCCCTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTCCGTTTGGCAAGAATGGTAAATGCTGTGCAAAATATTAGACTTTCTTCTCTAACAACAAATCACGGATCGTCACCAATCCGCAAAGGTTATTGTGCAGTTTA
TGTTGGGGAAAGCCAAAAGAGGCGGTTTGTGATTCCTATTGCTTACTTGAATGAGCCATTTTTCAAGGACTTGCTAAGTCAAGTTGAAGAAGAATTTGGTTACAGTCATC
CTATGGGAGGCCTCACTATTCCTTGCAGCGATGACACATTCATGGATCTCATCTCTCGTCTGAATGATCAAAGACTGGTATTGGAGGGTAGCATGGTGGAACAAGATCCT
GTGCTGCAGTCACTCTGGTTTTCTCTTCCATTTAATTACCCTTTGTACTTAGAGCCACATTCATTATCATCGGAACCTTCCTTTGTCATTCAAGAAAACATAATGACATT
AGCTGACAAGAACTTTAATTTCGGAGCTTTCAAGGATATAATAGCTAATAAAGATCTTGTTGTAGGAGACGCGGTAAAGCTTGGAAGCAACACAAGTTTATTTCATGGAT
CTTCTGCTCGACTCCGACAACACATTTCTCTTCAGGAACTACTACATTTGAAGAGGGACCAAACTGTGCGCAGTTACTTTCTTAGCCCTGAGCTCAAGCTGCAAGTTGGA
AGACAGAGCCATGTGAAGCCCTTGTGAACTCTGCTCTAACCAGACCCCAACCTGCCTCTTCCTCCGTCCCAGAACTTTTATATGATATTATAACGTCACAGCCAAGATTT
GGAATTTGAATTCGGCACCTAATAACCTTAGCATTCCCTTGCCTGGCGCGCCATCTTTGCTTACACTACTTCTAAGAGTGAAAGACTATTCTCACAAATTAAGAAGCACA
CTTAACTCTGAAGTTCCTATGGTTGAGCCACAAAAAAGGAAGGTGCATCTAGTTGATATAGATAGTAACTTTCAATTCTTTTAAGTCTTTCTTAACCATGTTTTTATATG
CTTAGAATTCTCTCATTCAAATGTGATTTATGTGATTTATGTTCATTTATGTACCCTTTCTAAATTCAGGCCATACAAAATGAGTGTAAATAGGATTTTCTAT
Protein sequenceShow/hide protein sequence
MGFRLARMVNAVQNIRLSSLTTNHGSSPIRKGYCAVYVGESQKRRFVIPIAYLNEPFFKDLLSQVEEEFGYSHPMGGLTIPCSDDTFMDLISRLNDQRLVLEGSMVEQDP
VLQSLWFSLPFNYPLYLEPHSLSSEPSFVIQENIMTLADKNFNFGAFKDIIANKDLVVGDAVKLGSNTSLFHGSSARLRQHISLQELLHLKRDQTVRSYFLSPELKLQVG
RQSHVKPL