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Clc11G04130 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04130
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin-responsive protein
Genome locationClcChr11:3865530..3866426
RNA-Seq ExpressionClc11G04130
SyntenyClc11G04130
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147005.1 auxin-responsive protein SAUR50 [Cucumis sativus]3.8e-5194.55Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILK NKLPQ TVLKQILKRCSSLGKK SNN AYDAD++LPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_008457621.1 PREDICTED: auxin-induced protein 15A [Cucumis melo]1.5e-5295.45Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKK SNN AYDAD++LPLDVPKGHFAVYVGENRSR+IVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_022943433.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]6.4e-5191.82Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K++N  AYDADDDLPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_022947563.1 auxin-responsive protein SAUR50 [Cucurbita moschata]4.6e-4991.82Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K NKLPQPTVLKQILKRCSSLGKK +NN  YD D+DLP+DVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

XP_038900691.1 auxin-responsive protein SAUR50 [Benincasa hispida]1.1e-5599.09Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKKSSNN AYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

TrEMBL top hitse value%identityAlignment
A0A0A0LJ77 Uncharacterized protein1.8e-5194.55Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILK NKLPQ TVLKQILKRCSSLGKK SNN AYDAD++LPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A1S3C616 auxin-induced protein 15A7.4e-5395.45Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKK SNN AYDAD++LPLDVPKGHFAVYVGENRSR+IVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A5D3BIH0 Auxin-induced protein 15A7.4e-5395.45Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAILKVNKLPQPTVLKQILKRCSSLGKK SNN AYDAD++LPLDVPKGHFAVYVGENRSR+IVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A6J1FWX1 auxin-responsive protein SAUR50-like3.1e-5191.82Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K++N  AYDADDDLPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

A0A6J1J850 auxin-responsive protein SAUR50-like3.1e-5191.82Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MAI K+NKLPQ TVLKQILKRCSSLG+K++N  AYDADDDLPLDVPKGHFAVYVGENRSRFIVPIS LTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLTSSMLR
Subjt:  FRSLTSSMLR

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR503.2e-3775.7Show/hide
Query:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH
        MAI+ K +KL Q  +LKQILKRCSSLGKK  N   YD +D LPLDVPKGHF VYVGENRSR+IVPISFLTHPEFQ LL++AEEEFGFDH MGLTIPC E 
Subjt:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH

Query:  VFRSLTS
        VF++LTS
Subjt:  VFRSLTS

P0DKL1 Auxin-responsive protein SAUR501.1e-2455.77Show/hide
Query:  ILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR
        I K +K  Q   +K+I+K+CSS GK +        D  LP DVPKGHF VYVGE R+R+IVPIS L HP FQ LL+++EEEFGF+H MG+ IPCQE  F 
Subjt:  ILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFR

Query:  SLTS
        S  S
Subjt:  SLTS

P32295 Indole-3-acetic acid-induced protein ARG74.4e-1862.69Show/hide
Query:  LDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM
        LD PKG+ AVYVGEN  RF++P+S L  P FQ LL QAEEEFG+DH M GLTIPC E +F+ +TS +
Subjt:  LDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM

P33081 Auxin-induced protein 15A5.7e-1862.12Show/hide
Query:  DVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM
        D PKG+ AVYVGE   RF++P+S+L  P FQ LL QAEEEFG+DH M GLTIPC E VF+ +TS +
Subjt:  DVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYM-GLTIPCQEHVFRSLTSSM

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 104.5e-3166.06Show/hide
Query:  MAILKVNKL--PQPTVLKQILKRCSSLGK-KSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ
        MAI + +K    Q   +KQI+KRCSSL K K+ N   Y+ +DDLP DVPKGHF VYVG NRSR+IVPIS+L H EFQ LLR AEEEFGFDH MGLTIPC 
Subjt:  MAILKVNKL--PQPTVLKQILKRCSSLGK-KSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ

Query:  EHVFRSLTS
        E  FRSL S
Subjt:  EHVFRSLTS

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family1.1e-3768.14Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSN--NAAYDAD-DDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ
        MAI+  +KL Q T++KQILKRCSSLGKK S+  N  ++ D D LPLDVPKGHF VYVG NR R+++PISFLT PEFQ LL+QAEEEFGFDH MGLTIPC+
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSN--NAAYDAD-DDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQ

Query:  EHVFRSLTSSMLR
        E  F+SL +SML+
Subjt:  EHVFRSLTSSMLR

AT1G75580.1 SAUR-like auxin-responsive protein family5.1e-3872.73Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MA+ K NKL Q  ++KQILKRCSSLGKK SN    D ++  PL+VPKGHF VYVGENR R++VPISFLT PEFQ LL+QAEEEFGFDH MGLTIPC+E V
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTSSMLR
        FRSLT SMLR
Subjt:  FRSLTSSMLR

AT2G16580.1 SAUR-like auxin-responsive protein family5.3e-3569.16Show/hide
Query:  MAILKVN-KLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH
        M+ILK + KL Q  +L+QILKRCSSLGKK+      +   DLPLDVPKGHF VYVG NRSR+IVPISFLT+ +FQCLLR+AEEEFGFDH MGLTIPC E 
Subjt:  MAILKVN-KLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH

Query:  VFRSLTS
         F+ LTS
Subjt:  VFRSLTS

AT2G21220.1 SAUR-like auxin-responsive protein family2.8e-3670.75Show/hide
Query:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV
        MA+ + +KL Q  +LKQILKRCSSL K    N  YD +D LP+DVPKGHF VYVGE RSR+IVPISFLTHP+F+ LL+QAEEEFGF+H MGLTIPC+E V
Subjt:  MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHV

Query:  FRSLTS
        FRSLTS
Subjt:  FRSLTS

AT4G34760.1 SAUR-like auxin-responsive protein family2.3e-3875.7Show/hide
Query:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH
        MAI+ K +KL Q  +LKQILKRCSSLGKK  N   YD +D LPLDVPKGHF VYVGENRSR+IVPISFLTHPEFQ LL++AEEEFGFDH MGLTIPC E 
Subjt:  MAIL-KVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEH

Query:  VFRSLTS
        VF++LTS
Subjt:  VFRSLTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATCCTAAAGGTAAACAAACTCCCACAACCTACCGTCCTCAAACAAATCCTCAAACGTTGCTCTAGCCTCGGCAAAAAATCGTCCAACAACGCCGCCTACGACGC
CGACGACGACCTCCCTCTCGACGTCCCCAAGGGCCACTTTGCTGTCTACGTCGGTGAAAACCGAAGCCGTTTCATCGTTCCGATCTCCTTCTTAACCCATCCAGAATTCC
AATGCTTACTTCGTCAAGCAGAAGAAGAATTTGGATTTGATCATTACATGGGCCTCACCATCCCTTGTCAAGAACATGTCTTCAGATCCTTAACCTCCTCCATGCTTAGA
TGA
mRNA sequenceShow/hide mRNA sequence
TAGAAAAAGACTTACTAGTTCCCACCTCTCTCTCTCTGTATGAGGGTCCAACTTGCCATTGGGATAGCCAACATACAAAGCAAAAGTAGACCCATTTGGTTTTTTCTCCT
CTCTCTCTCTCTCCCTCCTTCCCTCCCTTAGGACACATTACCCAACACTCTCATGGCTTGTCCTTCACTCCTTTCTCTTCTCCTCTCCATATTTCATTCTCAATCTCACC
CCCTTCTTCTTAAATACCCCATTCTCCTCCTCCTCCACCCGCTCATATCCATCCACTTTTTTTTTTCTCCAAAAGGAGATTATTAGTTCCCCATTTTCCCCATTTTCCTC
ACTCAAATTCCCACAAACACATACACAATCAAATGGCCATCCTAAAGGTAAACAAACTCCCACAACCTACCGTCCTCAAACAAATCCTCAAACGTTGCTCTAGCCTCGGC
AAAAAATCGTCCAACAACGCCGCCTACGACGCCGACGACGACCTCCCTCTCGACGTCCCCAAGGGCCACTTTGCTGTCTACGTCGGTGAAAACCGAAGCCGTTTCATCGT
TCCGATCTCCTTCTTAACCCATCCAGAATTCCAATGCTTACTTCGTCAAGCAGAAGAAGAATTTGGATTTGATCATTACATGGGCCTCACCATCCCTTGTCAAGAACATG
TCTTCAGATCCTTAACCTCCTCCATGCTTAGATGAATTATTACCAAACCCAAAACACTATATTATTTCAACTTCATTTTCTTTCATCAAGATGGGGTTTTTCATGGACAA
GAATTCACAAGAATTTGAAGATGGCCAAGGAACAGAGATTATTGCTCATAATCTCTTTTTCTTTTTTTTTTTCCAACCATCTTCTTTTTCACTTTCTTTTCCATGGATTT
CATCATCTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MAILKVNKLPQPTVLKQILKRCSSLGKKSSNNAAYDADDDLPLDVPKGHFAVYVGENRSRFIVPISFLTHPEFQCLLRQAEEEFGFDHYMGLTIPCQEHVFRSLTSSMLR