; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G04140 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04140
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionAuxin-responsive protein
Genome locationClcChr11:3889668..3890398
RNA-Seq ExpressionClc11G04140
SyntenyClc11G04140
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045662.1 auxin-responsive protein SAUR64 [Cucumis melo var. makuwa]5.1e-6589.51Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA+RAPP+DVPAGH+AVCVG+ CRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +VVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

KAE8651884.1 hypothetical protein Csa_006495 [Cucumis sativus]1.5e-6477.91Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA  APP+DVPAGH+AVCVG+ CRRFIVR TFLNHPIF KLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLLLLLFTLRSNKPDYIEATGPPPVRFGRRDG
        +VVA SELSNSSR SNLKDL RRCDEDVR   L                      YIEATGPP VRFGRRDG
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLLLLLFTLRSNKPDYIEATGPPPVRFGRRDG

XP_004147056.1 auxin-induced protein X10A [Cucumis sativus]3.0e-6590.91Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA  APP+DVPAGH+AVCVG+ CRRFIVR TFLNHPIF KLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +VVA SELSNSSR SNLKDL RRCDEDVR KNLEFLGESRPLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

XP_008457620.1 PREDICTED: auxin-responsive protein SAUR64 [Cucumis melo]5.1e-6589.51Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA+RAPP+DVPAGH+AVCVG+ CRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +VVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

XP_038902037.1 auxin-responsive protein SAUR71-like [Benincasa hispida]3.8e-6895.1Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MS +TSKS+KIRRIVRLRQMLQHWRKKARAAA RAPP+DVPAGHVAVCVGS CRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +VVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

TrEMBL top hitse value%identityAlignment
A0A0A0LM48 Uncharacterized protein1.5e-6590.91Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA  APP+DVPAGH+AVCVG+ CRRFIVR TFLNHPIF KLLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +VVA SELSNSSR SNLKDL RRCDEDVR KNLEFLGESRPLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A1S3C5H3 auxin-responsive protein SAUR642.5e-6589.51Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA+RAPP+DVPAGH+AVCVG+ CRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +VVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A5A7TQK8 Auxin-responsive protein SAUR642.5e-6589.51Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MSPETSKSHKIRRIVRLRQMLQHWRKKAR AA+RAPP+DVPAGH+AVCVG+ CRRFIV  TFLNHPIFR+LLSQAEEEYGFETRGPLALPCDESVFEEVL
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +VVARSELSN+SR SNLKDL RRCDEDVR KNLEFLGES PLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A6J1FXH8 auxin-responsive protein SAUR50-like4.1e-6085.31Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MS   +KS+KIR IVRLRQMLQHWRKKARAAA+RAPP DVPA HVAVCVGS CRRFIVRA+FLNHPIFRKLLSQAEEEYGF TRGPLALPCDESVFEEV+
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +V+ARSEL+NSSR+S+LKDLQRRCD+DVR KNLE+LGESRPLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

A0A6J1JBR0 auxin-responsive protein SAUR50-like7.0e-6084.62Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL
        MS   +KS+KIR IVRLRQMLQHWRKKARAAA+RAPP DVPA HVAVCVGS CRRFIVRA+FLNHPIFRKLLSQAEEEYGF TRGPLALPCDESVFEEV+
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVL

Query:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        +V+ARSEL+NSSR+S++KDLQRRCD+DVR KNLE+LGESRPLL
Subjt:  QVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR408.9e-1248.44Show/hide
Query:  ADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQ
        + VP+GHV V VG D  RF+V A  LNHP+F  LL+++ +EYG+  +G L +PC+  VFE+V++
Subjt:  ADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQ

O65695 Auxin-responsive protein SAUR503.4e-1137.62Show/hide
Query:  KSHKIRRIVRLRQMLQH----WRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQV
        K+ K+ +   L+Q+L+      +K          P DVP GH  V VG +  R+IV  +FL HP F+ LL +AEEE+GF+    L +PCDE VF+ +  +
Subjt:  KSHKIRRIVRLRQMLQH----WRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQV

Query:  V
        +
Subjt:  V

Q9LTV3 Auxin-responsive protein SAUR728.9e-1246.88Show/hide
Query:  ADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQ
        + VP GHV V VG +  RF+V A  LNHP+F  LL+++ +EYG+E +G L +PC   VFE +++
Subjt:  ADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQ

Q9SA49 Auxin-responsive protein SAUR417.5e-1134.11Show/hide
Query:  HKIRRIVR---------LRQMLQHWRKKARAAANRAPPA-----------DVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLA
        H IRR+ R         +R+    +R +       APP             VPAGHV V VG +  RF+V A  +NHPIF  LL+++ +EYG+  +G L 
Subjt:  HKIRRIVR---------LRQMLQHWRKKARAAANRAPPA-----------DVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLA

Query:  LPCDESVFEEVLQVVARSELSNSSRNSNL
        +PC   VFE V++ +       S    NL
Subjt:  LPCDESVFEEVLQVVARSELSNSSRNSNL

Q9SGU2 Auxin-responsive protein SAUR715.2e-1240Show/hide
Query:  IRRIVRLRQMLQHWRKKARAAANRAPPAD----VPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQ
        IRR+ R+    Q+   ++ +   R         VP GHV V VG +  RF+V A  LNHP+F  LL Q+ +EYG+E +G L +PC   VFE +L+
Subjt:  IRRIVRLRQMLQHWRKKARAAANRAPPAD----VPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQ

Arabidopsis top hitse value%identityAlignment
AT1G19840.1 SAUR-like auxin-responsive protein family3.9e-3957.24Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV
        M+    K  KIR IVRLRQML+ WR KAR ++ +R  P+DVP+GHVAVCVGS CRRF+VRA++LNHPI   LL QAEEE+GF  +GPL +PC+ESVFEE 
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV

Query:  LQVVARSELSNSSRNSNLKDLQRRCDEDVRIKN-LEFLGESRPLL
        ++ ++RS+ S SSR +   DLQ +C+  ++IK+ L+ + ESRPLL
Subjt:  LQVVARSELSNSSRNSNLKDLQRRCDEDVRIKN-LEFLGESRPLL

AT1G75590.1 SAUR-like auxin-responsive protein family1.5e-3553.1Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA--NRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEE
        M+    K  KIR IVRLRQML+ WR +AR ++  +R  P+DVP+GHVAV VGS CRRF+VRAT+LNHP+ R LL QAEEE+GF  +GPL +PC+ESVFEE
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAA--NRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEE

Query:  VLQVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
         ++ ++RS+ + S R +   D Q+ C        L+   ESRPLL
Subjt:  VLQVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL

AT4G34750.1 SAUR-like auxin-responsive protein family4.2e-3354.55Show/hide
Query:  KSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQVVAR
        K++KI  +VR+RQML+ W+KKA   ++N  P +DVP GHVAV VG + RR++VRA  LNHPIFR+LL++AEEEYGF   GPLA+PCDES+FE+++ +V R
Subjt:  KSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQVVAR

Query:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL
         E S+SS   N     L+DL RRC      KN     ESRPLL
Subjt:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL

AT4G34750.2 SAUR-like auxin-responsive protein family4.2e-3354.55Show/hide
Query:  KSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQVVAR
        K++KI  +VR+RQML+ W+KKA   ++N  P +DVP GHVAV VG + RR++VRA  LNHPIFR+LL++AEEEYGF   GPLA+PCDES+FE+++ +V R
Subjt:  KSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQVVAR

Query:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL
         E S+SS   N     L+DL RRC      KN     ESRPLL
Subjt:  SELSNSSRNSN-----LKDLQRRCDEDVRIKNLEFLGESRPLL

AT5G10990.1 SAUR-like auxin-responsive protein family1.2e-3252.78Show/hide
Query:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV
        M+    K  KIR IV+LRQML+ WR KAR ++  R+ P+DVP+GHVAV VG  CRRF+V AT+LNHPI   LL +AEEE+GF  +GPL +PC+ESVFEE 
Subjt:  MSPETSKSHKIRRIVRLRQMLQHWRKKAR-AAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEV

Query:  LQVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL
        ++ + R     SSR +   DL++     +R K L+ L ESRPLL
Subjt:  LQVVARSELSNSSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACCGGAGACGTCGAAAAGTCACAAGATCCGTCGCATTGTCCGCCTCCGGCAAATGCTACAACACTGGCGCAAGAAGGCACGTGCCGCGGCCAACAGAGCACCGCC
AGCCGACGTTCCCGCCGGTCACGTCGCCGTATGCGTCGGTAGCGACTGCCGGCGATTCATCGTCCGCGCCACCTTCCTAAACCATCCGATCTTCCGTAAGTTACTCTCAC
AGGCCGAAGAAGAATACGGCTTCGAAACGCGAGGTCCTCTGGCTCTTCCGTGCGACGAATCGGTCTTCGAAGAAGTTCTCCAAGTCGTCGCTCGCTCCGAGTTGAGTAAC
TCATCGCGAAATTCGAATCTCAAGGATTTACAAAGGCGATGCGATGAAGATGTTAGGATTAAGAACCTCGAGTTCTTAGGCGAATCGAGACCTTTACTACTTCTTCTTTT
TACCTTACGTTCTAACAAACCGGATTATATTGAAGCTACGGGTCCTCCTCCGGTAAGATTTGGCCGGAGAGACGGCCGGATGGCCATTAACGGTTGCTTCAGCGAGCCAG
TCGGCGTGGAATCGGAGGTTTTTTCTTCTTCTTTAGTTTATATTATAGTTTGTAAATGCCCTAATGAGGCCTCCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCACCGGAGACGTCGAAAAGTCACAAGATCCGTCGCATTGTCCGCCTCCGGCAAATGCTACAACACTGGCGCAAGAAGGCACGTGCCGCGGCCAACAGAGCACCGCC
AGCCGACGTTCCCGCCGGTCACGTCGCCGTATGCGTCGGTAGCGACTGCCGGCGATTCATCGTCCGCGCCACCTTCCTAAACCATCCGATCTTCCGTAAGTTACTCTCAC
AGGCCGAAGAAGAATACGGCTTCGAAACGCGAGGTCCTCTGGCTCTTCCGTGCGACGAATCGGTCTTCGAAGAAGTTCTCCAAGTCGTCGCTCGCTCCGAGTTGAGTAAC
TCATCGCGAAATTCGAATCTCAAGGATTTACAAAGGCGATGCGATGAAGATGTTAGGATTAAGAACCTCGAGTTCTTAGGCGAATCGAGACCTTTACTACTTCTTCTTTT
TACCTTACGTTCTAACAAACCGGATTATATTGAAGCTACGGGTCCTCCTCCGGTAAGATTTGGCCGGAGAGACGGCCGGATGGCCATTAACGGTTGCTTCAGCGAGCCAG
TCGGCGTGGAATCGGAGGTTTTTTCTTCTTCTTTAGTTTATATTATAGTTTGTAAATGCCCTAATGAGGCCTCCATTTAA
Protein sequenceShow/hide protein sequence
MSPETSKSHKIRRIVRLRQMLQHWRKKARAAANRAPPADVPAGHVAVCVGSDCRRFIVRATFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLQVVARSELSN
SSRNSNLKDLQRRCDEDVRIKNLEFLGESRPLLLLLFTLRSNKPDYIEATGPPPVRFGRRDGRMAINGCFSEPVGVESEVFSSSLVYIIVCKCPNEASI