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Clc11G04210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:3984922..3990424
RNA-Seq ExpressionClc11G04210
SyntenyClc11G04210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571074.1 hypothetical protein SDJN03_29989, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2382.61Show/hide
Query:  KKKREKVRDEFFIDGGIFGSASRPEGEGSDPLPASSQRHSQLGCSSPSLLPRCVGPPGEIRGKQTRGRS
        ++K E+ R+E F+DGGIFGSASRPEGEGSDPLPAS QRHSQLGCSSPSLL RCVGPPGEIR KQ RGRS
Subjt:  KKKREKVRDEFFIDGGIFGSASRPEGEGSDPLPASSQRHSQLGCSSPSLLPRCVGPPGEIRGKQTRGRS
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCACCCACTTGCCCGAGAAATGGCCATTTCATCAAGCTCAGAAAAATTTTGGCACCTACATGGTTTGATCACTCTTGGCTGGCTCTGCTTTCTAACCTACAATC
TCAGCTCGCATCTGAATTTGAAGCTTACTTCTCTTCAAGTCCCTCCAAGCAGCTGAAGGTAGATACAAGGCATCTGAAGAAGAAGAAGAGAGAGAAAGTGAGAGATGAGT
TTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCTGTTCATCGCCA
TCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGATTCGAGGCAAACAAACACGTGGAAGATCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCACCCACTTGCCCGAGAAATGGCCATTTCATCAAGCTCAGAAAAATTTTGGCACCTACATGGTTTGATCACTCTTGGCTGGCTCTGCTTTCTAACCTACAATC
TCAGCTCGCATCTGAATTTGAAGCTTACTTCTCTTCAAGTCCCTCCAAGCAGCTGAAGGTAGATACAAGGCATCTGAAGAAGAAGAAGAGAGAGAAAGTGAGAGATGAGT
TTTTCATCGACGGCGGGATATTTGGCTCGGCGAGCCGCCCAGAAGGAGAGGGTTCGGATCCTTTACCGGCGAGCTCTCAAAGACACTCTCAATTGGGCTGTTCATCGCCA
TCTCTTTTACCGAGATGCGTCGGACCTCCGGGAGAGATTCGAGGCAAACAAACACGTGGAAGATCTTGA
Protein sequenceShow/hide protein sequence
MEPPTCPRNGHFIKLRKILAPTWFDHSWLALLSNLQSQLASEFEAYFSSSPSKQLKVDTRHLKKKKREKVRDEFFIDGGIFGSASRPEGEGSDPLPASSQRHSQLGCSSP
SLLPRCVGPPGEIRGKQTRGRS