CuGenDBv2

Gene ID	Clc11G04280
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Squalene synthase
Genome location	ClcChr11:4060815..4066957
RNA-Seq Expression	Clc11G04280
Synteny	Clc11G04280
Gene Ontology terms	GO:0008610 - lipid biosynthetic process (biological process) GO:0045338 - farnesyl diphosphate metabolic process (biological process) GO:0005789 - endoplasmic reticulum membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0004310 - farnesyl-diphosphate farnesyltransferase activity (molecular function) GO:0051996 - squalene synthase activity (molecular function)
InterPro domains	IPR002060 - Squalene/phytoene synthase IPR006449 - Squalene synthase-like IPR008949 - Isoprenoid synthase domain superfamily IPR019845 - Squalene/phytoene synthase, conserved site IPR033904 - Trans-isoprenyl diphosphate synthases, head-to-head IPR044844 - Trans-isoprenyl diphosphate synthases, eukaryotic-type

Homology

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GenBank top hits

e value

%identity

Alignment

ARE29887.1 squalene synthase [Cucumis sativus]

1.4e-225

96.22

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Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGLSKLFHAA+ EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRIEAIQ+TCKQSG+LN+RKLYVVRSEPM+NPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

ARE29889.1 squalene synthase [Benincasa hispida var. chieh-qua]

3.8e-228

97.48

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLH+VSRSFALVIQQL+PELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGLSKLFHAAK EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

KAA0045628.1 squalene synthase-like [Cucumis melo var. makuwa]

1.8e-225

96.47

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Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGLSKLFHAA+ EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRIEAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

XP_008461009.1 PREDICTED: squalene synthase-like [Cucumis melo]

1.8e-225

96.47

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGLSKLFHAA+ EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRIEAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

XP_038902127.1 squalene synthase 12-like [Benincasa hispida]

3.8e-228

97.48

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Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLH+VSRSFALVIQQL+PELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGLSKLFHAAK EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIW1 Squalene synthase

1.9e-225

95.97

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGLSKLFHAA+ EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRIEAIQ+TCKQSG+LN+RKLYVVRSEPM+NPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

A0A1S3CD95 Squalene synthase

8.6e-226

96.47

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGLSKLFHAA+ EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRIEAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

A0A2R2WEW0 Squalene synthase

6.6e-226

96.22

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGLSKLFHAA+ EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRIEAIQ+TCKQSG+LN+RKLYVVRSEPM+NPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

A0A2R2WEW2 Squalene synthase

1.8e-228

97.48

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLH+VSRSFALVIQQL+PELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGLSKLFHAAK EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNN+EVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

A0A5A7TS05 Squalene synthase

8.6e-226

96.47

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPE HWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDT IQTDIKVPILKAFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFIC+EVETV DYDEYCHYVAGLVGLGLSKLFHAA+ EDLAPDSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS
        YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNS+DPNASKTLSRIEAIQQTC+QSGL+NKRKLYVVRSEPMYNPAV+   +S
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYS

SwissProt top hits

e value

%identity

Alignment

A0A1P7Y0A8 Squalene synthase 12

8.0e-197

81.31

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDT I T++KVPI+ AFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IY+ DWHFSCGTK+YKVLMDEFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGLSKLFHA+ +EDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY
        +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+++DPNA+KTLSR+EAIQ+TCK+SG L+KRK Y++ SE  +N A+++  +
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY

A0A1P7Y0D0 Squalene synthase 13

8.0e-197

81.31

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDT I T++KVPI+ AFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IY+ DWHFSCGTK+YKVLMDEFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGLSKLFHA+ +EDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY
        +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+++DPNA+KTLSR+EAIQ+TCK+SG L+KRK Y++ SE  +N A+++  +
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY

C9E894 Squalene synthase 2

6.8e-196

82.7

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDT I T++KVPIL AFH H
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IY+ DWHFSCGTK+YKVLMDEFHHVS AFL+LG GY+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGLSKLFHA+ +EDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIM+IGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSG-LLNKRKLYVVRSEPMYNPAVV
        YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYGAFFDFS MLK+KV+++DPNA+KTLSR+EAIQ+ CK SG L  KRK Y++ +E  YN  ++
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSG-LLNKRKLYVVRSEPMYNPAVV

D2K762 Squalene synthase 3

4.0e-196

82.44

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHPDDFYPLLKLK+AARHAEKQIP EPHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDT I T++KVPI+ AFHCH
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IY+ DWHFSCGTK+YKVLMDEFHHVS AFL+LG  Y+EAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGLSKLFHA+ +EDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VTNAL HVEDCLKYMS+LRD +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSG-LLNKRKLYVVRSEPMYNPAVV
        YNN++VFRGVVKMRRGLTAKVIDRT TM+DVYG FFDFS MLK+KV+++DPNA+KTLSR+EAIQ+ CK SG L  KRK Y++ +E  YN  ++
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSG-LLNKRKLYVVRSEPMYNPAVV

O48666 Squalene synthase 1

7.3e-198

82.07

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLGAILKHP+DFYPLLKLK AARHAEKQIPPEPHW FCY+MLHKVSRSF LVIQQL P+LR+AVCIFYLVLRALDTVEDDT I T++KVPIL AFH H
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS
        IY++DWHFSCGTK+YKVLMDEFHHVS AFLELG GYQEAIEDIT RMGAGMAKFIC+EVET+ DYDEYCHYVAGLVGLGLSKLFHA+ +EDLA DSLSNS
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNS

Query:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC
        MGLFLQKTNIIRDYLEDINEIPKSRMFWPR+IW KY DKLED KYEENS KAVQCLND+VT+AL H EDCLKYMS+LR  +IFRFCAIPQIMAIGTLALC
Subjt:  MGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALC

Query:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY
        +NN +VFRGVVKMRRGLTAKVID+TKTM+DVYGAFFDFS +LK+KV+++DPNA+KTLSR+EAIQ+TCK+SG L+KRK Y++ SE  +N A+++  +
Subjt:  YNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYY

Arabidopsis top hits

e value

%identity

Alignment

AT4G34640.1 squalene synthase 1

2.0e-187

81.41

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSLG +L++PDD YPLLK+K A   AEKQIPPEPHWGFCY+MLHKVSRSF+LVIQQL  ELRNAVC+FYLVLRALDTVEDDT I TD KVPIL AFH H
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPD--SLS
        IY+ DWH+SCGTK+YK+LMD+FHHVS AFLEL KGYQEAIE+IT+RMGAGMAKFICQEVETV DYDEYCHYVAGLVGLGLSKLF AA SE L PD  ++S
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA
        NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLED KYEEN+ K+VQCLN++VTNAL H+EDCLKYM +LRD SIFRFCAIPQIMAIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYV
        LCYNN +VFRGVVK+RRGLTAKVIDRTKTMADVYGAF+DFS MLK KV+ +DPNASKTL+R+EA+Q+ C+ +G+L  RK YV
Subjt:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYV

AT4G34650.1 squalene synthase 2

9.8e-174

75.39

Show/hide

Query:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH
        MGSL  IL+HPD+ YPLLKLK+A   A+KQIP EPH  FCY++LHKVS+SF+LVIQQL  ELRNAVC+FYL+LRALDTVEDDT +  +IKVPIL AFH H
Subjt:  MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCH

Query:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPD--SLS
        IY+ DWHFSCGTK+YK+LMD+FHHVS AFL+L KGYQEAIEDITKRMGAGMAKFIC+EVET+ DYDEYCHY AGLVGLGLSK+F A++ E L PD   +S
Subjt:  IYNRDWHFSCGTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPD--SLS

Query:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA
        NS GLFLQKTNII+DYLEDINE PKSRMFWPREIWGKY DKLEDFK EE + KAVQCLN++VTNALNHVEDCLK +++LRD +IF+ CAIPQI+AIGTLA
Subjt:  NSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLA

Query:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYV
        LCYNNV+VFRGVV++RRGL AKVIDRTKTM DVYGAF+DFS ML+ KV+++DPNA KTL+R+E I++ CK++G L+KRK YV
Subjt:  LCYNNVEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTTTGAAACTGAAAATGGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTG
GGGATTTTGCTATACCATGCTGCATAAAGTCTCAAGAAGTTTTGCACTCGTTATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGCATATTTTATCTTGTTCTGC
GAGCCCTCGATACTGTTGAGGATGATACAGGCATACAAACAGACATCAAAGTGCCCATTCTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCATTTTTCATGT
GGCACAAAGGACTATAAAGTTCTTATGGATGAGTTTCATCATGTTTCAACTGCGTTTCTAGAACTTGGGAAAGGGTACCAGGAAGCAATTGAGGATATCACAAAACGGAT
GGGTGCAGGCATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGGTGATTATGATGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGT
TCCACGCTGCGAAGTCAGAGGATTTGGCACCTGATTCTCTTTCAAATTCTATGGGATTGTTTCTTCAGAAAACAAACATTATCCGAGATTACTTGGAGGACATTAATGAG
ATACCAAAGTCTAGAATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTGATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTCAAGGCCGTGCAATGCCTCAA
TGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATGTCTAACTTAAGAGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGATTATGGCGA
TTGGAACTCTAGCATTGTGCTACAATAATGTCGAAGTCTTCAGAGGGGTGGTCAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCGAACAAAAACGATGGCTGAC
GTCTATGGAGCTTTCTTTGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACAGCAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAACATG
CAAGCAGTCGGGGCTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAGCCAATGTACAATCCAGCTGTGGTGAGTTTCTATTACTCAAATCGCATTAAAATGATAT
CGTTAAGTAATTACGTAAGAATGTCTGATGATGTGTGTTGTTCGAATCCAGATTGTCATACTTTTCAGCCTATTATGCATCATTCTCGCGTATCTCTCTGCCAAACGGTT
ACCAGCCAACCAATCTGTATGAGCGTCAAACTCCGTATACGAGTTCCAACAGAACACACTGCAAACGTGCACGGCATGATTCAGTTTCTGGTCATTATCTTTCTCAGAGC
TTTGTTTAAATATTACAATGGCTGTAAGTTACTGTTTGTTTAG

mRNA sequence

Show/hide mRNA sequence

TGAAAATTGATTATCATTTGAATTTGAGGCTTCAAAAAAATTCAGTTTTGAACACGCCATTTTGGCAATTTGTATATTCACCATTGATCAGGAAGGGCTCTCTGTCTACA
AGTTCCTCATCCATTTCTGTATTAAGAAACCACGTCTTTCACGTTTTTTTCTTTCCAATCTCTGATTACAGGAAGGATCTCAACAAACATTTTGATTTTGATTTTGATTC
TGCATAGCAATAAAAGCAACAAACAACTAGCCAAAGTCTTCTTTCAAACTTCGCTCTGCAAAAACTCGTTTGTCTTCCTTTTACGTTGAGACACATCTGAAAATAACCCT
TCATTCAGTTTTCAGTCATTTGGGTTTCAATCATTCTGTTCTCTTTGCTTTCTACTTTGAATTTCTCATCATCAATTGAAGAATTGGAATCCCATTTGAGGAATTGGGCA
TTTGTTTTACGGGTTGACCAGCGAGAGATCTGAAGCTCTGTGGTTGTGAGAGCGAGAAATGGGGAGTTTGGGGGCAATTTTGAAACACCCAGATGATTTTTACCCGCTTT
TGAAACTGAAAATGGCCGCTAGACATGCGGAGAAGCAGATCCCACCTGAGCCTCATTGGGGATTTTGCTATACCATGCTGCATAAAGTCTCAAGAAGTTTTGCACTCGTT
ATTCAGCAGCTTAAGCCCGAGCTTCGCAATGCTGTATGCATATTTTATCTTGTTCTGCGAGCCCTCGATACTGTTGAGGATGATACAGGCATACAAACAGACATCAAAGT
GCCCATTCTGAAAGCTTTTCACTGTCACATATATAACCGTGATTGGCATTTTTCATGTGGCACAAAGGACTATAAAGTTCTTATGGATGAGTTTCATCATGTTTCAACTG
CGTTTCTAGAACTTGGGAAAGGGTACCAGGAAGCAATTGAGGATATCACAAAACGGATGGGTGCAGGCATGGCTAAATTCATTTGCCAAGAGGTTGAGACAGTTGGTGAT
TATGATGAATATTGCCACTATGTAGCTGGACTTGTCGGACTAGGTTTATCTAAGCTGTTCCACGCTGCGAAGTCAGAGGATTTGGCACCTGATTCTCTTTCAAATTCTAT
GGGATTGTTTCTTCAGAAAACAAACATTATCCGAGATTACTTGGAGGACATTAATGAGATACCAAAGTCTAGAATGTTTTGGCCTCGTGAGATTTGGGGCAAATATGCTG
ATAAATTAGAGGATTTTAAATATGAGGAGAATTCAGTCAAGGCCGTGCAATGCCTCAATGATTTGGTCACTAATGCTTTGAACCATGTGGAGGATTGTCTGAAATACATG
TCTAACTTAAGAGATCTTTCCATTTTTCGATTTTGTGCAATCCCTCAGATTATGGCGATTGGAACTCTAGCATTGTGCTACAATAATGTCGAAGTCTTCAGAGGGGTGGT
CAAAATGCGTCGGGGTCTTACTGCTAAGGTCATTGATCGAACAAAAACGATGGCTGACGTCTATGGAGCTTTCTTTGATTTCTCTGTTATGCTGAAGGCTAAGGTCAACA
GCAGTGATCCTAATGCTTCTAAAACCCTGAGCAGGATCGAGGCAATACAGCAAACATGCAAGCAGTCGGGGCTCTTGAACAAGAGGAAATTGTATGTAGTAAGAAGTGAG
CCAATGTACAATCCAGCTGTGGTGAGTTTCTATTACTCAAATCGCATTAAAATGATATCGTTAAGTAATTACGTAAGAATGTCTGATGATGTGTGTTGTTCGAATCCAGA
TTGTCATACTTTTCAGCCTATTATGCATCATTCTCGCGTATCTCTCTGCCAAACGGTTACCAGCCAACCAATCTGTATGAGCGTCAAACTCCGTATACGAGTTCCAACAG
AACACACTGCAAACGTGCACGGCATGATTCAGTTTCTGGTCATTATCTTTCTCAGAGCTTTGTTTAAATATTACAATGGCTGTAAGTTACTGTTTGTTTAGTACAGAACA
GGAAACAACTGAAATCCTGTAGCCTTCTAATGGATATAGTGTAATGTTTGACATGAAAATAAGCTTGCTATTCATCTTGTTTTCCAGTCTTCTAATAAGGGATTAAGTCT
TGGAATTAAGAGTTCTTCATAAGAGTAATTTACAATGAACAAATGGTATGCATCTGTT

Protein sequence

Show/hide protein sequence

MGSLGAILKHPDDFYPLLKLKMAARHAEKQIPPEPHWGFCYTMLHKVSRSFALVIQQLKPELRNAVCIFYLVLRALDTVEDDTGIQTDIKVPILKAFHCHIYNRDWHFSC
GTKDYKVLMDEFHHVSTAFLELGKGYQEAIEDITKRMGAGMAKFICQEVETVGDYDEYCHYVAGLVGLGLSKLFHAAKSEDLAPDSLSNSMGLFLQKTNIIRDYLEDINE
IPKSRMFWPREIWGKYADKLEDFKYEENSVKAVQCLNDLVTNALNHVEDCLKYMSNLRDLSIFRFCAIPQIMAIGTLALCYNNVEVFRGVVKMRRGLTAKVIDRTKTMAD
VYGAFFDFSVMLKAKVNSSDPNASKTLSRIEAIQQTCKQSGLLNKRKLYVVRSEPMYNPAVVSFYYSNRIKMISLSNYVRMSDDVCCSNPDCHTFQPIMHHSRVSLCQTV
TSQPICMSVKLRIRVPTEHTANVHGMIQFLVIIFLRALFKYYNGCKLLFV

Clc11G04280 (gene) of Watermelon (cordophanus) v2 genome