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Clc11G04340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLong-chain-alcohol oxidase
Genome locationClcChr11:4132436..4132708
RNA-Seq ExpressionClc11G04340
SyntenyClc11G04340
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046577 - long-chain-alcohol oxidase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR007867 - Glucose-methanol-choline oxidoreductase, C-terminal
IPR036188 - FAD/NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591858.1 Long-chain-alcohol oxidase FAO4A, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1983.33Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

KAG7024722.1 Long-chain-alcohol oxidase FAO4A, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-1983.33Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

XP_023535226.1 long-chain-alcohol oxidase FAO4A-like [Cucurbita pepo subsp. pepo]1.8e-1983.33Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

XP_031740350.1 long-chain-alcohol oxidase FAO4A isoform X1 [Cucumis sativus]1.8e-1983.33Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

XP_031740351.1 long-chain-alcohol oxidase FAO4A isoform X2 [Cucumis sativus]1.8e-1983.33Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

TrEMBL top hitse value%identityAlignment
A0A0A0L1L5 GMC_oxred_C domain-containing protein8.9e-2083.33Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

A0A1S3BAQ9 Long-chain-alcohol oxidase4.4e-1981.82Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMG GAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

A0A5A7UFJ6 Long-chain-alcohol oxidase4.4e-1981.82Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMG GAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

A0A6J1FFC0 Long-chain-alcohol oxidase2.6e-1981.82Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+FIADSSVFPTAL VNP+VTVQAIAYCT + VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

A0A6J1IPF0 Long-chain-alcohol oxidase1.2e-1981.82Show/hide
Query:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGIGAKD VVNQ    WEVEG+F+ADSSVFPTAL VNP+VTVQAIAYCT Q VLETLKR+R
Subjt:  MGSCRMGIGAKDYVVNQ---IWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

SwissProt top hitse value%identityAlignment
B5WWZ8 Long-chain-alcohol oxidase FAO13.2e-1144.78Show/hide
Query:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERM
        MGSCRMG+  K+  V+   + WE +G+F+ D+S+ PTA+ VNP++T+Q+ AYC    V++ LKR+++
Subjt:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERM

B5WWZ9 Long-chain-alcohol oxidase FAO29.8e-0838.46Show/hide
Query:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRE
        M SCRM    ++  V+   + WE +G+++ D SV P+A+ VNP++T+Q+ AYC    + E+LK++
Subjt:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRE

O65709 Long-chain-alcohol oxidase FAO4A5.9e-1356.06Show/hide
Query:  MGSCRMGIGAKDYVV---NQIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGI  ++  V    + WEVE +F+AD+SVFPTAL VNP+VTVQ+IAYC    V++ LK+++
Subjt:  MGSCRMGIGAKDYVV---NQIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

Q94BP3 Long-chain-alcohol oxidase FAO4B4.7e-1039.71Show/hide
Query:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERMV
        MGSCRMG+ A++  ++   + WE EG+F+ D S+ P+A+ VNP++T+Q+ AYC    ++++L+ +  V
Subjt:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERMV

Q9ZWB9 Long-chain-alcohol oxidase FAO16.8e-0940.91Show/hide
Query:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        +G CRMG   K+  ++   + WE E +++ D+SV PTAL VNP++TVQ+ AYC    + E +K+ +
Subjt:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

Arabidopsis top hitse value%identityAlignment
AT1G03990.1 Long-chain fatty alcohol dehydrogenase family protein4.8e-1040.91Show/hide
Query:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        +G CRMG   K+  ++   + WE E +++ D+SV PTAL VNP++TVQ+ AYC    + E +K+ +
Subjt:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

AT3G23410.1 fatty alcohol oxidase 31.0e-0743.4Show/hide
Query:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYC
        MGSCR+G   K+  ++   + WE E +F+ D+S  P+A+ VNP++TV + AYC
Subjt:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYC

AT4G19380.1 Long-chain fatty alcohol dehydrogenase family protein4.2e-1456.06Show/hide
Query:  MGSCRMGIGAKDYVV---NQIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER
        MGSCRMGI  ++  V    + WEVE +F+AD+SVFPTAL VNP+VTVQ+IAYC    V++ LK+++
Subjt:  MGSCRMGIGAKDYVV---NQIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRER

AT4G28570.1 Long-chain fatty alcohol dehydrogenase family protein3.3e-1139.71Show/hide
Query:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERMV
        MGSCRMG+ A++  ++   + WE EG+F+ D S+ P+A+ VNP++T+Q+ AYC    ++++L+ +  V
Subjt:  MGSCRMGIGAKDYVVN---QIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERMV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAG
AGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTG
AACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTTGCAGGATGGGAATTGGAGCCAAGGATTATGTGGTGAATCAAATATGGGAGGTGGAAGGGGTCTTCATTGCTGATTCTAGTGTTTTTCCAACTGCTTTGAG
AGTTAATCCAGTGGTTACAGTTCAGGCTATTGCTTATTGCACTCCACAATTTGTTCTGGAAACTCTTAAGAGGGAGAGAATGGTTACAAAAGATACACATGAAACCATTG
AACTTATACAAAACACCCATTTACAACTTGGGGGGTCATGTGTCATGTTTTGA
Protein sequenceShow/hide protein sequence
MGSCRMGIGAKDYVVNQIWEVEGVFIADSSVFPTALRVNPVVTVQAIAYCTPQFVLETLKRERMVTKDTHETIELIQNTHLQLGGSCVMF