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Clc11G04775 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04775
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEncodes a protein of unknown function that is a marker for oxidative stress response.
Genome locationClcChr11:4560711..4561086
RNA-Seq ExpressionClc11G04775
SyntenyClc11G04775
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045538.1 uncharacterized protein E6C27_scaffold243G00290 [Cucumis melo var. makuwa]2.2e-3896.59Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPSTA NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD+NSET+GVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

KAG6605077.1 Epoxide hydrolase 3, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3897.73Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPS A NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

KAG7035086.1 hypothetical protein SDJN02_01881 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-3896.59Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPS A NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKN+ETSGVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

XP_008460939.1 PREDICTED: uncharacterized protein LOC103499674 [Cucumis melo]2.2e-3896.59Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPSTA NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD+NSET+GVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

XP_023006871.1 uncharacterized protein LOC111499535 [Cucurbita maxima]1.7e-3897.73Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPS A NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

TrEMBL top hitse value%identityAlignment
A0A0A0LIQ4 Uncharacterized protein7.0e-3895.45Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPSTA NPPIPSCRKKKNEEATFLEDLKDHIDEFI+ASMDEHKSCFKKTINKMFRMSKVVAD+NSET+GVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

A0A1S3CDL9 uncharacterized protein LOC1034996741.1e-3896.59Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPSTA NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD+NSET+GVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

A0A5A7TRS7 Uncharacterized protein1.1e-3896.59Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPSTA NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVAD+NSET+GVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

A0A6J1G5B9 uncharacterized protein LOC1114509967.0e-3896.59Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPS A NPPI SCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

A0A6J1KX05 uncharacterized protein LOC1114995358.3e-3997.73Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
        MEQQKEKPS A NPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G21640.1 Encodes a protein of unknown function that is a marker for oxidative stress response.9.2e-1451.16Show/hide
Query:  NPPIP-----SCRKK-KNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKM---FRMSKVVADKNSETSG-VESSLPLRTTVSE
        NPP P     SCRK+ K++ ATF  +LKDH+DEFIHASMDEHK+CFK T++K+   F  ++ VA+K  E    VE   PL+T V++
Subjt:  NPPIP-----SCRKK-KNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKM---FRMSKVVADKNSETSG-VESSLPLRTTVSE

AT3G05570.1 unknown protein7.0e-2258.89Show/hide
Query:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETS--GVESSLPLRTTVSE
        ME QK +      P   SCRKK  ++A FLED+KDHID+FI+ASMD+HK+CF KTI KMF +SK VADK    +  GVES LPL+TTVS+
Subjt:  MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETS--GVESSLPLRTTVSE

AT4G39235.1 unknown protein1.7e-2369.74Show/hide
Query:  PPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNS-ETSGVESSLPLRTTVSE
        P + SCRKK  ++ATF ED+KDHID+FIHASMDEHKSCF+KTI KMF +SK VA+K + E  GVES LPL+TTVSE
Subjt:  PPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNS-ETSGVESSLPLRTTVSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACAACAGAAAGAGAAACCATCAACTGCTACAAACCCACCCATTCCTTCTTGTCGAAAGAAGAAAAACGAAGAAGCTACATTTTTGGAGGATTTGAAGGATCACAT
CGACGAGTTCATTCATGCGTCAATGGATGAACACAAATCATGCTTCAAGAAAACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAAGAATTCAGAGACAA
GTGGAGTTGAAAGTTCTTTGCCTCTTCGAACAACAGTATCAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACAACAGAAAGAGAAACCATCAACTGCTACAAACCCACCCATTCCTTCTTGTCGAAAGAAGAAAAACGAAGAAGCTACATTTTTGGAGGATTTGAAGGATCACAT
CGACGAGTTCATTCATGCGTCAATGGATGAACACAAATCATGCTTCAAGAAAACTATCAACAAGATGTTCCGTATGTCAAAAGTTGTGGCAGATAAGAATTCAGAGACAA
GTGGAGTTGAAAGTTCTTTGCCTCTTCGAACAACAGTATCAGAATAA
Protein sequenceShow/hide protein sequence
MEQQKEKPSTATNPPIPSCRKKKNEEATFLEDLKDHIDEFIHASMDEHKSCFKKTINKMFRMSKVVADKNSETSGVESSLPLRTTVSE