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Clc11G04790 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04790
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr11:4568228..4571239
RNA-Seq ExpressionClc11G04790
SyntenyClc11G04790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_023512523.1 uncharacterized protein LOC111777245 isoform X1 [Cucurbita pepo subsp. pepo]3.8e-0665.22Show/hide
Query:  IKELVINRWVFSMKNCLVMLEIISILQSVNSQDEIFFGIKHIPDDL
        +KE +INR VFSM N L+MLE  S+L+ +NSQDE+F  IKHIPDDL
Subjt:  IKELVINRWVFSMKNCLVMLEIISILQSVNSQDEIFFGIKHIPDDL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGCAGAGGCCCTGAGAAAGTTGCCCCAACTTCACACCCAGAACAGAACAAACACACAGATTGCAGGCTCTGGGGCTATATCTTTGATGTGTCCTCTATCCTGAA
CAACCTTCCAAGCAAAGCTAGCTGGCCAAACGAGTCCTTTGGCACGCCAGTAAACGAGATTAAAGAACTAGTAATAAACCGATGGGTGTTTAGTATGAAGAATTGTTTGG
TGATGCTGGAAATTATATCAATTCTTCAATCTGTAAACAGCCAGGATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGCAACTGTTTCGGAATGGTGTTATT
GCAATATACTCTTATGCTTTGCCTACTTACTCCTTCATGATCCAAGTAGCGACTCATTTCGAACACGTTCTAGGAAAAACATACTCTAAGAAAGCATCTGATGACATAAG
ATGGCAGGGTGACACCCCTGCTTTAATCTCTAACTTAGGTAGAGAAATTAATACCTCGAAGCAGGCTTGTGATGGTGTTGTCTATTTTCTACCTGCACCGTCCAAACAAT
TACATGATATCTCTCGTGATCTTAAGCCTCCAATAGACGGTACACCATTGTCCTTAAGACCATTTTGTCAAGTTGCTCGAGTCTTGATACGCCCTCCGTTGACGTTAAGA
ATCCTTATCAAGTATCATCCTACTCCTATTCTTTTTCACATGAAAGTAATACTGGTATCGCTTCCTCCTCTCTCGTGGGACTGTTCTGCTACACAGTGGTCCTCTTCTTA
TGAGCCATTGAAAGACGACCTTGCAGGTTGGAAGAAACCAACGAGAATCTTGAACTTTATGGAGAGGAGAAGAATCGCACCGCCTCAACCTAGTTGGATGGTCCAAAGGC
GGCTGCAAAAGAATAAAGATAACTTATTATATGGAATCTTTGGAGCCAGTGAGCTTCGAATTCTGAGTTGTTTGTTTTGTTTTCCTCCAAGATTTATGCTAGTGAAGTTA
AAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGCAGAGGCCCTGAGAAAGTTGCCCCAACTTCACACCCAGAACAGAACAAACACACAGATTGCAGGCTCTGGGGCTATATCTTTGATGTGTCCTCTATCCTGAA
CAACCTTCCAAGCAAAGCTAGCTGGCCAAACGAGTCCTTTGGCACGCCAGTAAACGAGATTAAAGAACTAGTAATAAACCGATGGGTGTTTAGTATGAAGAATTGTTTGG
TGATGCTGGAAATTATATCAATTCTTCAATCTGTAAACAGCCAGGATGAAATATTTTTTGGTATCAAGCATATCCCTGATGACCTGCAACTGTTTCGGAATGGTGTTATT
GCAATATACTCTTATGCTTTGCCTACTTACTCCTTCATGATCCAAGTAGCGACTCATTTCGAACACGTTCTAGGAAAAACATACTCTAAGAAAGCATCTGATGACATAAG
ATGGCAGGGTGACACCCCTGCTTTAATCTCTAACTTAGGTAGAGAAATTAATACCTCGAAGCAGGCTTGTGATGGTGTTGTCTATTTTCTACCTGCACCGTCCAAACAAT
TACATGATATCTCTCGTGATCTTAAGCCTCCAATAGACGGTACACCATTGTCCTTAAGACCATTTTGTCAAGTTGCTCGAGTCTTGATACGCCCTCCGTTGACGTTAAGA
ATCCTTATCAAGTATCATCCTACTCCTATTCTTTTTCACATGAAAGTAATACTGGTATCGCTTCCTCCTCTCTCGTGGGACTGTTCTGCTACACAGTGGTCCTCTTCTTA
TGAGCCATTGAAAGACGACCTTGCAGGTTGGAAGAAACCAACGAGAATCTTGAACTTTATGGAGAGGAGAAGAATCGCACCGCCTCAACCTAGTTGGATGGTCCAAAGGC
GGCTGCAAAAGAATAAAGATAACTTATTATATGGAATCTTTGGAGCCAGTGAGCTTCGAATTCTGAGTTGTTTGTTTTGTTTTCCTCCAAGATTTATGCTAGTGAAGTTA
AAGAATTAG
Protein sequenceShow/hide protein sequence
MKGRGPEKVAPTSHPEQNKHTDCRLWGYIFDVSSILNNLPSKASWPNESFGTPVNEIKELVINRWVFSMKNCLVMLEIISILQSVNSQDEIFFGIKHIPDDLQLFRNGVI
AIYSYALPTYSFMIQVATHFEHVLGKTYSKKASDDIRWQGDTPALISNLGREINTSKQACDGVVYFLPAPSKQLHDISRDLKPPIDGTPLSLRPFCQVARVLIRPPLTLR
ILIKYHPTPILFHMKVILVSLPPLSWDCSATQWSSSYEPLKDDLAGWKKPTRILNFMERRRIAPPQPSWMVQRRLQKNKDNLLYGIFGASELRILSCLFCFPPRFMLVKL
KN