; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G04800 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04800
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich RNA-binding protein-like
Genome locationClcChr11:4576260..4577074
RNA-Seq ExpressionClc11G04800
SyntenyClc11G04800
Gene Ontology termsGO:0006858 - extracellular transport (biological process)
GO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:1990428 - miRNA transport (biological process)
GO:0050688 - regulation of defense response to virus (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005615 - extracellular space (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0035198 - miRNA binding (molecular function)
GO:0035197 - siRNA binding (molecular function)
GO:0005198 - structural molecule activity (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
InterPro domainsIPR035979 - RNA-binding domain superfamily
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 - RNA recognition motif domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571119.1 hypothetical protein SDJN03_30034, partial [Cucurbita argyrosperma subsp. sororia]3.1e-6091.91Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRRE-GGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN
        GGGGGYGGRRE GGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGY GGGGDGGSRY+R  GGGGGSEGGWRN
Subjt:  GGGGGYGGRRE-GGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN

XP_022943401.1 glycine-rich RNA-binding protein-like [Cucurbita moschata]2.1e-6191.38Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR----GGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGY GGGGDGGSRY+R    GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR----GGGGGSEGGWRN

XP_022986624.1 glycine-rich RNA-binding protein-like [Cucurbita maxima]2.2e-5890.23Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R  G
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G

Query:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGGGSEGGWRN
        GGGGGGGYGGRRE GGGGGY+RGGGGY  GGGGGGYGGGGYGGGRDRGY  GGGDGGSRY+RGGGGGSEGGWRN
Subjt:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGGGSEGGWRN

XP_023512522.1 glycine-rich RNA-binding protein 1-like [Cucurbita pepo subsp. pepo]1.1e-5791.33Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTFAEEE+MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGYGGGGY GGGRDRGY  GGGDGGSRY+R  GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGY-GGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN

XP_038901242.1 glycine-rich RNA-binding protein-like [Benincasa hispida]4.5e-5992.4Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVE+RCFVGGLAWATD+ ALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGG    GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR-GGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RG GGY  GGGGYGGGGYGGGRDR YGGGGGDGGSRYSR GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR-GGGGGSEGGWRN

TrEMBL top hitse value%identityAlignment
A0A1S3CE16 glycine-rich RNA-binding protein 1-like1.2e-5489.08Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-
        MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIV+DRETGRSRGFGFVTF+EE+AMRSAIEAMNG  LDGR+ITVNEAQQRGGGGGGG   GG 
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGG-

Query:  -GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGDGGSRYSR-GGGGGSEGGWRN
         GGGGGGYGGRR+GGGGGG+SRGGGGYGGGGGGY GGGGYGGGRDRGYGGGGG GG R +R GGGGGSEGGWRN
Subjt:  -GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGDGGSRYSR-GGGGGSEGGWRN

A0A6J1FRL7 glycine-rich RNA-binding protein-like1.0e-6191.38Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR----GGGGGSEGGWRN
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGY GGGGDGGSRY+R    GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR----GGGGGSEGGWRN

A0A6J1G631 glycine-rich RNA-binding protein 1-like3.4e-5789.53Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF +EEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGG    GG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGYGGGGYGGGRDRGYGGGGG  G RY R  GGGGGSEGGWRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN

A0A6J1JGK0 glycine-rich RNA-binding protein-like1.1e-5890.23Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF EE++MRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGY+R  G
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSR--G

Query:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGGGSEGGWRN
        GGGGGGGYGGRRE GGGGGY+RGGGGY  GGGGGGYGGGGYGGGRDRGY  GGGDGGSRY+RGGGGGSEGGWRN
Subjt:  GGGGGGGYGGRREGGGGGGYSRGGGGY--GGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGGGSEGGWRN

A0A6J1L652 glycine-rich RNA-binding protein 1-like isoform X13.4e-5789.71Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGYSRG
        MASSSVEYRCFVGGLAWATD++ALEKAFS FG+IVEAKIVNDRETGRSRGFGFVTF +EEAMRSAIEAMNGQNLDGRSITVNEAQQR  GGGGGGGY+R 
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR--GGGGGGGYSRG

Query:  GGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN
        GGGGGGGYGGRREGGGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGGG  G RY R  GGGGGSEGGWRN
Subjt:  GGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY-GGGGYGGGRDRGYGGGGGDGGSRYSR--GGGGGSEGGWRN

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A4.4e-3369.41Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AFS +G+++++KI+NDRETGRSRGFGFVTF +E++M+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG  RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGG--GGYGGGGGGY-----GGGGYGGGRDRGYGGGGGDGGSRYSRGGGGG
        GG    GG   GGGGGGY  GG  GGY GGGGGY     GGGGYGGG  R  G GGG GGS    GGGGG
Subjt:  GGGGGYGGRREGGGGGGYSRGG--GGYGGGGGGY-----GGGGYGGGRDRGYGGGGGDGGSRYSRGGGGG

Q03250 Glycine-rich RNA-binding protein 74.2e-3668.57Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AF+ +GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+  GGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGG
             GGGGGY GG    GGGGG   GGGGY GGGGGY     GGG YGGGR  G GG GGG+GG     GGGGG
Subjt:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGG

Q03878 Glycine-rich RNA-binding protein5.9e-3873.12Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG---
        + VEYRCFVGGLAWAT+  +LE+AFS FGDI ++KI+NDRETGRSRGFGFVTF +E++MR AIE MNGQ LDGR+ITVNEAQ RG GGGGG   GGG   
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG---

Query:  GGGGGYGGRREGGGGGGY----SRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRY
        GGGGGYGGRREGGGGGGY      GGGGYGGGGGGYGG   GG  D GYGGGG  GGSR+
Subjt:  GGGGGYGGRREGGGGGGY----SRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRY

Q43472 Glycine-rich RNA-binding protein blt8016.7e-3469.46Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG
        + VEYRCFVGGL WATD  +L+ AFS +GD++++KI+ DRETGRSRGFGFVTFA +EAMR AIEAMNGQ+LDGR+ITVNEAQ R   GGGG+    GGGG
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG

Query:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGGSEGGWR
        GGYGG+R  GGGGGY  GGGGYGGG  G GGGGY G RD G GG GGG GG   SRGG GG  G WR
Subjt:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGGSEGGWR

Q99070 Glycine-rich RNA-binding protein 21.1e-3364.61Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MA++ VEYRCFVGGLAWAT++  LE+AF+ FG ++++K++ DRETGRSRGFGFVTF+ E++M  AIE MNG+ LDGR+ITVN+AQ RGGGGGGG   G G
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGG---GGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGG-----GGSEGGWRN
        GGGGGYGGR     GGGY  GGGGYGG   GGGGYGGGGYGGG   G G GG +GG  Y  GGG     G S G WRN
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGG---GGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGG-----GGSEGGWRN

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 23.0e-3768.57Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AF+ +GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+  GGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGG
             GGGGGY GG    GGGGG   GGGGY GGGGGY     GGG YGGGR  G GG GGG+GG     GGGGG
Subjt:  -----GGGGGY-GGRREGGGGGGYSRGGGGYGGGGGGY-----GGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGG

AT2G21660.2 cold, circadian rhythm, and rna binding 21.1e-3671.95Show/hide
Query:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG
        MAS  VEYRCFVGGLAWATD  ALE AF+ +GD++++KI+NDRETGRSRGFGFVTF +E+AM+ AIE MNGQ+LDGRSITVNEAQ RG GGGGG+ RGGG
Subjt:  MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGG
          GGG GGRRE  GGGGYS GGGGY   GG  GGG YGGGR  G GG GGG+GG     GGGGG
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGG-GGGDGGSRYSRGGGGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.7e-3266.67Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRG--------GGGGGGY
        S VEYRCFVGGLAWAT+   L++ FS FGD++++KI+NDRE+GRSRGFGFVTF +E+AMR AIE MNG+ LDGR ITVNEAQ RG        GG GGGY
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRG--------GGGGGGY

Query:  SRGGGGG-GGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGG
          GGGGG  GG GG   GGGGGGY R  GGYG GGGG G G  GGGR  G G GGGDGGS Y  GGGG
Subjt:  SRGGGGG-GGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGG

AT4G39260.2 cold, circadian rhythm, and RNA binding 14.2e-3167.88Show/hide
Query:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG
        S VEYRCFVGGLAWAT+   L++ FS FGD++++KI+NDRE+GRSRGFGFVTF +E+AMR AIE MNG+ LDGR ITVNEAQ RG GGGGG   G GG G
Subjt:  SSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGG

Query:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG
        GGY      GGGGGYS      GGGGGGY GGG GGG
Subjt:  GGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGYGGG

AT5G61030.1 glycine-rich RNA-binding protein 34.1e-1852.63Show/hide
Query:  RCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR---GGGGGGGYSRGGGGGGGG
        + F+GG+A++ D ++L +AF+ +G++V+ +++ DRETGRSRGFGFVTF   EA  SAI+A++G++L GR + VN A  R   GG GGGGY    GGGGGG
Subjt:  RCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQR---GGGGGGGYSRGGGGGGGG

Query:  YGGRREGGGGGGYSRGGGGYGGGGGGYG---GGGYGGGRDRGYGGG-----GGDGGSRYSRGGGGGSEGGW
        YGG    GGG G   G GGYGGG GGYG   GGGYGG    GYGG      GGD       GGG GS GG+
Subjt:  YGGRREGGGGGGYSRGGGGYGGGGGGYG---GGGYGGGRDRGYGGG-----GGDGGSRYSRGGGGGSEGGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCTTGGGCCACTGATAGTAATGCCTTAGAGAAGGCTTTCTCTCCATTTGGCGATATCGTTGAAGC
CAAGATCGTCAACGATCGTGAAACCGGAAGGTCGAGAGGATTTGGTTTCGTTACGTTTGCTGAGGAGGAGGCGATGAGAAGTGCTATTGAAGCAATGAACGGCCAGAATC
TTGACGGTCGTAGTATTACCGTCAACGAGGCGCAGCAAAGAGGTGGAGGTGGCGGCGGTGGTTACAGCCGCGGTGGTGGTGGTGGTGGAGGTGGATACGGTGGACGCCGT
GAAGGAGGAGGCGGTGGTGGTTACAGCCGTGGAGGCGGTGGTTACGGTGGAGGAGGAGGTGGATACGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGCTACGGTGG
TGGTGGTGGTGATGGTGGATCTCGTTACTCCAGGGGTGGCGGCGGTGGATCTGAAGGAGGATGGAGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCTCTTCTGTTGAGTACCGTTGCTTTGTGGGTGGCCTTGCTTGGGCCACTGATAGTAATGCCTTAGAGAAGGCTTTCTCTCCATTTGGCGATATCGTTGAAGC
CAAGATCGTCAACGATCGTGAAACCGGAAGGTCGAGAGGATTTGGTTTCGTTACGTTTGCTGAGGAGGAGGCGATGAGAAGTGCTATTGAAGCAATGAACGGCCAGAATC
TTGACGGTCGTAGTATTACCGTCAACGAGGCGCAGCAAAGAGGTGGAGGTGGCGGCGGTGGTTACAGCCGCGGTGGTGGTGGTGGTGGAGGTGGATACGGTGGACGCCGT
GAAGGAGGAGGCGGTGGTGGTTACAGCCGTGGAGGCGGTGGTTACGGTGGAGGAGGAGGTGGATACGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGCTACGGTGG
TGGTGGTGGTGATGGTGGATCTCGTTACTCCAGGGGTGGCGGCGGTGGATCTGAAGGAGGATGGAGAAATTAG
Protein sequenceShow/hide protein sequence
MASSSVEYRCFVGGLAWATDSNALEKAFSPFGDIVEAKIVNDRETGRSRGFGFVTFAEEEAMRSAIEAMNGQNLDGRSITVNEAQQRGGGGGGGYSRGGGGGGGGYGGRR
EGGGGGGYSRGGGGYGGGGGGYGGGGYGGGRDRGYGGGGGDGGSRYSRGGGGGSEGGWRN