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Clc11G04860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionorgan-specific protein P4-like
Genome locationClcChr11:4656706..4659298
RNA-Seq ExpressionClc11G04860
SyntenyClc11G04860
Gene Ontology termsNA
InterPro domainsIPR024489 - Organ specific protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571127.1 hypothetical protein SDJN03_30042, partial [Cucurbita argyrosperma subsp. sororia]3.6e-2463.39Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT--
        M LS+AFFLLL SL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV     NQK+ FM NFDPHPNAIIYHAH+HAH     T T    
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT--

Query:  -KINPTLPNLSP
         K NPT+ N +P
Subjt:  -KINPTLPNLSP

XP_004148852.1 uncharacterized protein LOC101213460 [Cucumis sativus]8.3e-2972.48Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLL--DNDNSMVVDNNN-NQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKIN
        M LS+AFF LL SLLL GD++HG S+KEEGEYWKKIMK+EA+PEMLKELL+  D+ +SMV  NNN  QKEHF+TNFDPHPNAIIYHAH+HAH S     N
Subjt:  MNLSVAFFLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLL--DNDNSMVVDNNN-NQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKIN

Query:  PT-LPNLSP
        PT LPNLSP
Subjt:  PT-LPNLSP

XP_022944721.1 organ-specific protein P4-like [Cucurbita moschata]2.7e-2463.39Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT--
        M LS+AFF LLISL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV     NQK+ FM NFDPHPNAIIYHAH+HAH     T T    
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT--

Query:  -KINPTLPNLSP
         K NPT+ N +P
Subjt:  -KINPTLPNLSP

XP_022986644.1 organ-specific protein S2-like [Cucurbita maxima]7.2e-2561.4Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTH--------
        M LS+AFFLLL SL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV     NQK+ FM NFDPHPNAIIYHAH+HAH   H        
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTH--------

Query:  --TKINPTLPNLSP
           K NPT+ N +P
Subjt:  --TKINPTLPNLSP

XP_038901980.1 organ-specific protein P4 [Benincasa hispida]6.1e-3274.53Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYH-AHSHAHTST-HTKINPT
        M LSVAFFLLL+SLLL G++SHGS+KEEGEYWKKIMKDE IP++LKE LLD DNS+V   +NN+KEHFMTNFDPHPNAIIYH AH+  H +  H KINPT
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYH-AHSHAHTST-HTKINPT

Query:  LPNLSP
        LPN SP
Subjt:  LPNLSP

TrEMBL top hitse value%identityAlignment
A0A0A0LP62 Uncharacterized protein4.0e-2972.48Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLL--DNDNSMVVDNNN-NQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKIN
        M LS+AFF LL SLLL GD++HG S+KEEGEYWKKIMK+EA+PEMLKELL+  D+ +SMV  NNN  QKEHF+TNFDPHPNAIIYHAH+HAH S     N
Subjt:  MNLSVAFFLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLL--DNDNSMVVDNNN-NQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKIN

Query:  PT-LPNLSP
        PT LPNLSP
Subjt:  PT-LPNLSP

A0A6J1FYV4 organ-specific protein P4-like1.3e-2463.39Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT--
        M LS+AFF LLISL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV     NQK+ FM NFDPHPNAIIYHAH+HAH     T T    
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAH-----TSTHT--

Query:  -KINPTLPNLSP
         K NPT+ N +P
Subjt:  -KINPTLPNLSP

A0A6J1G7K5 organ-specific protein P4-like1.3e-1958Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPTLP
        M LS AFFLL   L+L  +VSH ++KE+GEYWKK+MKDEAIPEMLKELL D+D+ +   +++ Q EHFM NFD HPNAIIYH+H   H     K  P+ P
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPTLP

A0A6J1JGL9 organ-specific protein S2-like3.5e-2561.4Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTH--------
        M LS+AFFLLL SL+LF DVSHGS+K++G+YWKK+MK+E IPEMLKELL   D+SMV     NQK+ FM NFDPHPNAIIYHAH+HAH   H        
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTH--------

Query:  --TKINPTLPNLSP
           K NPT+ N +P
Subjt:  --TKINPTLPNLSP

A0A6J1L3N5 organ-specific protein P4-like8.4e-1959Show/hide
Query:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPTLP
        M LS AFFLL  SLLL  +VSH ++KE+GEYWKK+MKDEAIPEMLKELL D+D+ +   +++ Q E FM NFD HPNAIIYH+H   H     K   T P
Subjt:  MNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHAHSHAHTSTHTKINPTLP

SwissProt top hitse value%identityAlignment
P17772 Organ-specific protein S29.5e-0439.29Show/hide
Query:  MNLSVAFFLL-LISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHF--MTNFDPHPNAIIY
        M+L  AF LL L  LL+  +V   S+K+ GEYWK +MKD+ +PE ++ LL   D S + ++  + KE+   +  F+P P A  Y
Subjt:  MNLSVAFFLL-LISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHF--MTNFDPHPNAIIY

Arabidopsis top hitse value%identityAlignment
AT1G49310.1 unknown protein2.1e-0642.31Show/hide
Query:  FLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNN--NNQKEHFMTNFDPHPNAIIYH
        F++L+S LLF ++S G +     EYWKK+MK+E +PE +KELL          NN     +E F+ NFD     IIYH
Subjt:  FLLLISLLLFGDVSHG-SKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNN--NNQKEHFMTNFDPHPNAIIYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACCAACCATGGTTAAAACCCAAAAAAAAGAATATAACATTGCTTCTGCCTTCATCTGTTGCGAGACAAACACATATGAACCTTTCTGTTGCTTTCTTCCTTCT
CCTAATTTCTCTTCTCCTGTTTGGAGATGTAAGCCATGGAAGCAAGAAGGAAGAAGGAGAATACTGGAAAAAGATAATGAAAGATGAAGCAATTCCAGAGATGTTAAAAG
AGCTTTTATTGGATAATGATAATTCAATGGTTGTGGACAACAACAACAACCAAAAGGAGCATTTTATGACCAATTTTGATCCTCATCCAAATGCTATAATTTACCATGCC
CATTCCCATGCTCATACCTCCACTCATACCAAAATTAACCCCACTCTTCCCAATTTATCCCCATAA
mRNA sequenceShow/hide mRNA sequence
CCCAAACCCATCCCAAAACCCTAGAAAATTTAATTATTGAGAATACTTCCTTTTTTATATATAAAAATAAAAATAAAAATAAAATATTTATGATAAGTATAGTTCCAATA
ATTAAATAATTTAATGTTTTGACCCAGAAATATTTGTCTATAAAATGGAAAACCAACCATGGTTAAAACCCAAAAAAAAGAATATAACATTGCTTCTGCCTTCATCTGTT
GCGAGACAAACACATATGAACCTTTCTGTTGCTTTCTTCCTTCTCCTAATTTCTCTTCTCCTGTTTGGAGATGTAAGCCATGGAAGCAAGAAGGAAGAAGGAGAATACTG
GAAAAAGATAATGAAAGATGAAGCAATTCCAGAGATGTTAAAAGAGCTTTTATTGGATAATGATAATTCAATGGTTGTGGACAACAACAACAACCAAAAGGAGCATTTTA
TGACCAATTTTGATCCTCATCCAAATGCTATAATTTACCATGCCCATTCCCATGCTCATACCTCCACTCATACCAAAATTAACCCCACTCTTCCCAATTTATCCCCATAA
AATCTTCTTAATTTCCCATATATATATATATATATTCCTAATTGTCAACTCCCTTATCTTTTCTGTAAATTAATATATTTAGTGTGTGTTTTTTTTCATATATATACCCT
CCAACTTTGTACTTTGTTTAAAAAAAAATTTATATAATCTTATTATTGACATTTCAAAAGTATTACAATGTATGGCAATGACGTAAAACGATGTGGTGATGTAAATTTTC
GTTATAAATTATTGTTGCATATAATATACCATTTTTATATTTTGGTTTTGAAAGGATACGAGTATTTTTTAAATAAATGGTAAAGTTTAAAGTATATTCAACTTATAATT
CTAGGTTTGGGTGTTTAAATTATTGTTATTCTATTTGAGAAGTATATATGTGCAAATTTATCCGTTCTTAAATTCTAGATACGTGGTTACTAT
Protein sequenceShow/hide protein sequence
MENQPWLKPKKKNITLLLPSSVARQTHMNLSVAFFLLLISLLLFGDVSHGSKKEEGEYWKKIMKDEAIPEMLKELLLDNDNSMVVDNNNNQKEHFMTNFDPHPNAIIYHA
HSHAHTSTHTKINPTLPNLSP