; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc11G04890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G04890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationClcChr11:4692595..4697053
RNA-Seq ExpressionClc11G04890
SyntenyClc11G04890
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605088.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]3.6e-13591.97Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+ QLS RNS RSIVSA+PRPYGD STIGLSSKT+GAPLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

XP_008457934.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Cucumis melo]2.4e-13995.26Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSI QLSRR SHRSIVSALPRPYGD STIGLSSKT GAPLNLDDKDFLLTSTSYGPIEA+KGNP IMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ IEKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

XP_022948075.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita moschata]7.3e-13692.34Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+GAPLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

XP_023534664.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic [Cucurbita pepo subsp. pepo]3.6e-13591.61Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIG S KT+GAPLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

XP_038902836.1 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic isoform X1 [Benincasa hispida]4.0e-14295.99Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        M VASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGD STIGLSSKTMG PL++DDKDFL TSTSYGPIEA+KGNP IMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHK+D MYAAFTGQPIEKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

TrEMBL top hitse value%identityAlignment
A0A0A0LLX4 ATP-dependent Clp protease proteolytic subunit4.5e-13188.32Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVAS FTASLSFSV+S+NR SSISQLSRRNSHRSIVSA PRPYGD STIGLSSKT GAPLNLDDKDFL TSTSY PI A++ NP +MPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFG+ ASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGG VEDVRRQVNEAVQSR+K++ MYAAFTGQ IE +QQY +RDRFLS SEAL+FGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

A0A1S3C7Y1 ATP-dependent Clp protease proteolytic subunit1.2e-13995.26Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVAS FTASL+FSV+S NRTSSI QLSRR SHRSIVSALPRPYGD STIGLSSKT GAPLNLDDKDFLLTSTSYGPIEA+KGNP IMPAVMTPGGPLDL
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQPVNS VAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQ IEKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

A0A6J1D5M0 ATP-dependent Clp protease proteolytic subunit1.1e-13491.58Show/hide
Query:  VVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLS
        + ASAFTASL+FSVSS+NRTSSI  LSRRNS RS+VS LPRPYGD STIGLSSK++ APL+LDDKDFL  STSY PIEAKKGNP IMPAVMTPGGPLDLS
Subjt:  VVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLS

Query:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
        SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM
Subjt:  SVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIM

Query:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        IHQPQSGCGGHVEDVRRQVNEAVQSRHKVD M++AFTGQP+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  IHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

A0A6J1G8P9 ATP-dependent Clp protease proteolytic subunit3.5e-13692.34Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        MVVASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+GAPLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

A0A6J1KXP8 ATP-dependent Clp protease proteolytic subunit1.7e-13591.61Show/hide
Query:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL
        M VASAFTASL FSVSSHNR SS+ QLSRRNS RSIVSA+PRPYGD STIGLSSKT+G PLNLD+ DFL TSTSYGPI AKKGNP IMPAVMTPGGPL+L
Subjt:  MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDL

Query:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
        SSVLFRNRIIFIGQP+NS VAQRVISQLVTLATIDE++DILVYLNCPGGSTYS+LAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI
Subjt:  SSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRI

Query:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQP+EKVQQYTERDRFLS SEALEFGLIDGVLETEY
Subjt:  MIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

SwissProt top hitse value%identityAlignment
P54415 ATP-dependent Clp protease proteolytic subunit 14.9e-4246.56Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++ + A  TGQP+ +++  T+RD F+SASEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE

Q59993 ATP-dependent Clp protease proteolytic subunit 21.2e-4347.5Show/hide
Query:  PIEAKKGN--PSIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT
        P+    GN   S++P V+   G      D+ S L R RIIF+G PV+  VA  +++QL+ L   D + DI +Y+N PGGS Y+ LAIYD M  I+P V T
Subjt:  PIEAKKGN--PSIMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGT

Query:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVL
        +CFG+AAS GA LL+GG KG R A+P+SRIMIHQP  G  G   ++  Q  E +  + +++ M    TGQP+EK+Q+ TERD F+SA EA E+GLID V+
Subjt:  VCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVL

Q5N665 ATP-dependent Clp protease proteolytic subunit 14.9e-4246.56Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L R RIIF+G+PV S VA R+++QL+ L   D + DI +Y+N PGGS Y  L I+D M+ I+P V TVC G+AAS GA 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE
        LLA G KG R ++ +SRIMIHQP  G  G  +D+  Q NE +  +  ++ + A  TGQP+ +++  T+RD F+SASEA+E+GLID V++
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE

Q5P161 ATP-dependent Clp protease proteolytic subunit2.9e-4245.21Show/hide
Query:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL
        ++P V+   G      D+ S L + R+IF+  PVN + A  +++QL+ L + + D D+  Y+N PGGS  S +AIYD M +IKP V T+C G AAS G+ 
Subjt:  IMPAVMTPGG----PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGAL

Query:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVL
        LLA GEKG R+ +PNSR+MIHQP  G  G   D+     E +  R K++ M A  TGQPIE++++ T+RDRF+SA++A+E+G++D VL
Subjt:  LLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVL

Q9SAA2 ATP-dependent Clp protease proteolytic subunit 6, chloroplastic2.7e-10975.85Show/hide
Query:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K     +  +G IEAKKGNP +MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        GGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYTERDRFLSASEALEFGLIDG+LETEY
Subjt:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 55.2e-3943.63Show/hide
Query:  DFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKP
        D  + S+ Y P  A+   P  M           + S LF+ RII  G  V+  +A  +++QL+ L  +D   DI++Y+N PGGS  + +AI+D M  I+P
Subjt:  DFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKP

Query:  KVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLI
         V TVC G+AAS GA LL+ G KG RY++PNSRIMIHQP  G  G   D+  Q NE +  +  ++   A  TGQ +EK+ Q T+RD F+SA EA E+GLI
Subjt:  KVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLI

Query:  DGVL
        DGV+
Subjt:  DGVL

AT1G11750.1 CLP protease proteolytic subunit 61.9e-11075.85Show/hide
Query:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI
        LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K     +  +G IEAKKGNP +MP+VMTPGGPLDLSSVLFRNRI
Subjt:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRI

Query:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC
        IFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMPN+R+MIHQPQ+GC
Subjt:  IFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGC

Query:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        GGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYTERDRFLSASEALEFGLIDG+LETEY
Subjt:  GGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

AT1G11750.2 CLP protease proteolytic subunit 63.3e-11073.74Show/hide
Query:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDK----------DFLLTSTSY---GPIEAKKGNPSIMPAVMTPGG
        LSFS  + N + +S    ++RN  R IVSAL  PYGD    GLSS   G+P+ +D+K          + L +ST Y   G IEAKKGNP +MP+VMTPGG
Subjt:  LSFSVSSHN-RTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDK----------DFLLTSTSY---GPIEAKKGNPSIMPAVMTPGG

Query:  PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP
        PLDLSSVLFRNRIIFIGQP+N+ VAQRVISQLVTLA+ID+ +DIL+YLNCPGGSTYSVLAIYDCMSWIKPKVGTV FGVAASQGALLLAGGEKGMRYAMP
Subjt:  PLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMP

Query:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY
        N+R+MIHQPQ+GCGGHVEDVRRQVNEA+++R K+D MYAAFTGQP+EKVQQYTERDRFLSASEALEFGLIDG+LETEY
Subjt:  NSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY

AT1G66670.1 CLP protease proteolytic subunit 36.7e-3941.24Show/hide
Query:  IEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA
        I++   +PS +P+       LD +++L R RI+F+G  V+ + A  VISQL+ L   D + DI +++N PGGS  + + IYD M   K  V TVC G+AA
Subjt:  IEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRIIFIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAA

Query:  SQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE
        S GA LLA G KG RY MPNS++MIHQP    GG   ++  ++ E +  + K++ +++  TG+P  +++  T+RD FL+  EA E+GLID V++
Subjt:  SQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE

AT5G45390.1 CLP protease P41.6e-3535.25Show/hide
Query:  SFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLS-SKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRII
        + S+SS  + S +S  SR NS  S  S+    +  P+ + L  +K +  PL       L  + +   IE  +   S +      G   D+  +L R RI+
Subjt:  SFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLS-SKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRII

Query:  FIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG
        F+G  ++  VA  ++SQL+ L   D   DI +++N PGGS  + +AIYD +  ++  V T+  G+AAS  +++L  G KG R+AMPN+RIMIHQP  G  
Subjt:  FIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCG

Query:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE
        G   DV  Q  E + +++ V  + A  T +  E+V +  +RDR++S  EA+E+GLIDGV++
Subjt:  GHVEDVRRQVNEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGTAGCTTCAGCTTTTACTGCATCTCTCAGTTTCTCTGTCTCTTCGCACAATCGAACGTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCGATAGT
ATCTGCCTTGCCGAGGCCATATGGTGACCCTTCGACAATTGGATTATCGAGTAAAACAATGGGGGCACCTCTAAACCTTGACGATAAAGACTTTCTTCTCACCAGTACAA
GTTATGGACCTATAGAGGCTAAGAAAGGTAATCCATCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATTATA
TTTATTGGTCAACCTGTCAACTCTATCGTGGCACAGCGAGTCATATCACAACTTGTGACTTTAGCAACAATTGACGAGGATGCAGATATCCTGGTGTATCTGAATTGCCC
TGGTGGAAGTACATACTCGGTATTAGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGAGCTCTTCTCC
TTGCAGGTGGAGAAAAGGGGATGCGCTATGCCATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGACGTCAAGTC
AATGAAGCAGTTCAATCACGCCATAAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCTATAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTGTCTGC
TTCCGAGGCTTTAGAGTTTGGGCTTATTGACGGCGTGCTGGAAACAGAATACTGA
mRNA sequenceShow/hide mRNA sequence
CGATATTGTTGTAATTTCCATTAGTCTCTTTTGGTTTCACAGTGAAGCTCGATAACACAGCGCCATTCTCACAAGCTTCGCTCAAAATGGTAGTAGCTTCAGCTTTTACT
GCATCTCTCAGTTTCTCTGTCTCTTCGCACAATCGAACGTCATCCATTTCTCAACTTTCTCGAAGAAATTCACACAGGTCGATAGTATCTGCCTTGCCGAGGCCATATGG
TGACCCTTCGACAATTGGATTATCGAGTAAAACAATGGGGGCACCTCTAAACCTTGACGATAAAGACTTTCTTCTCACCAGTACAAGTTATGGACCTATAGAGGCTAAGA
AAGGTAATCCATCCATTATGCCTGCAGTGATGACACCAGGAGGGCCTTTGGATCTCTCTTCTGTGTTATTTAGGAATCGTATTATATTTATTGGTCAACCTGTCAACTCT
ATCGTGGCACAGCGAGTCATATCACAACTTGTGACTTTAGCAACAATTGACGAGGATGCAGATATCCTGGTGTATCTGAATTGCCCTGGTGGAAGTACATACTCGGTATT
AGCAATTTATGATTGTATGTCTTGGATAAAGCCTAAGGTTGGTACAGTGTGCTTCGGAGTTGCTGCAAGCCAAGGAGCTCTTCTCCTTGCAGGTGGAGAAAAGGGGATGC
GCTATGCCATGCCAAATTCTCGAATTATGATACATCAGCCACAAAGTGGATGTGGGGGTCATGTGGAGGATGTTAGACGTCAAGTCAATGAAGCAGTTCAATCACGCCAT
AAAGTTGACATGATGTATGCTGCATTTACTGGCCAACCTATAGAGAAAGTACAACAATACACGGAGAGGGATCGGTTTTTGTCTGCTTCCGAGGCTTTAGAGTTTGGGCT
TATTGACGGCGTGCTGGAAACAGAATACTGAGCTTTTTGGCGAAGACTAAAAGTGTGCGGAATCATCTTCTCCAAGCTTTGGTACAGAATATCAAAATTTCAGTCCGAAT
TAGCGTCGTTTCATTGGTGAACTCCCAAATTCTCTGAATCAATGCTCATGAGCTAGCAATTGAGAACACGATGAGATGATTCCTATATTCAATCTCATTCTTGTCAAAAT
TCTTGTTCTTGAAAAAACATGTATTCTTGAACTCTCACCTTGTCGGCTTCAACATTAAGAATTCATCCTGATAGCAACTTGAAAAATAGAGCACCGAAAGCAGGTTTGGA
AGCTGTTCTCAAATTTTAGATAGATCGTTTTTTAAAGGTAGATAGCTTATCTATTTTGTCTCTAAACTTAGTTTAGAGCTGTATAATATAATAGTTATCTCAATTTTTAA
TTTTGTGTTTGCGTTGGATCTAGGTTTTCCATAATTTGAAATTTTTTAAAATTAATTGAATTATTTAATATG
Protein sequenceShow/hide protein sequence
MVVASAFTASLSFSVSSHNRTSSISQLSRRNSHRSIVSALPRPYGDPSTIGLSSKTMGAPLNLDDKDFLLTSTSYGPIEAKKGNPSIMPAVMTPGGPLDLSSVLFRNRII
FIGQPVNSIVAQRVISQLVTLATIDEDADILVYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNSRIMIHQPQSGCGGHVEDVRRQV
NEAVQSRHKVDMMYAAFTGQPIEKVQQYTERDRFLSASEALEFGLIDGVLETEY