CuGenDBv2

Gene ID	Clc11G05800
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	thylakoid membrane protein slr0575
Genome location	ClcChr11:5590688..5596976
RNA-Seq Expression	Clc11G05800
Synteny	Clc11G05800
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021275 - Protein of unknown function DUF2854

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039379.1 thylakoid membrane protein [Cucumis melo var. makuwa]

6.7e-123

89.11

Show/hide

Query:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE
        MSI+ ISPTPGL + S+ QFTL NRLS++SL FS P R ISLP GGNF+ R N  VHFE +TLL KP RLAFTFS RAADSTQPS+VSASPDKAVVTDDE
Subjt:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

XP_004141498.1 uncharacterized protein LOC101213350 [Cucumis sativus]

1.8e-123

89.49

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Query:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE
        MSI+ ISPTPGL +CS+DQFTL NRLS+VSL FS P RTISLP G NF+ R N  VHFE  TLL KP RLAF+FS RAADSTQPS+VSASP KAVVTDDE
Subjt:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFE+RQ
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

XP_008459460.1 PREDICTED: thylakoid membrane protein slr0575 [Cucumis melo]

2.5e-122

88.72

Show/hide

Query:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE
        MSI+ ISPTPGL + S+ QFTL NRLS++SL FS P R I LP GGNF+ R N  VHFE +TLL KP RLAFTFS RAADSTQPS+VSASPDKAVVTDDE
Subjt:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

XP_023524489.1 uncharacterized protein LOC111788387 [Cucurbita pepo subsp. pepo]

2.4e-120

87.84

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Query:  ISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFS
        +SGISP   L  CS+D+FTL NRLS+VSLRFS PY   SLP GGN+ GR NF VHFEPR  LQKPQRLAFTFSARAAD+TQPSSVSASPDKAVVTDDEFS
Subjt:  ISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFN+LPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDV+R+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE

Query:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFE+RQ
Subjt:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

XP_038890554.1 thylakoid membrane protein slr0575-like [Benincasa hispida]

1.1e-138

83.07

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Query:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE
        MSISGISPTPGLCSCS+DQFTLGNRLSV+SLRFS PYRTIS P GGNF+GRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVV+DDE
Subjt:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTY DAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQKINLIVAQTQILLVLMQNLLLFLDQGSPQKLVRERMICMKSGL
        DEALKRIFQYG+AGGIPRRSAPILQSIREEV EDGKYCLVLVFEAKALTLSDFEQRQ                     F   G   ++ +      ++GL
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQKINLIVAQTQILLVLMQNLLLFLDQGSPQKLVRERMICMKSGL

Query:  FLTLFPVLHHDKL
        FLTLFPVLH DK+
Subjt:  FLTLFPVLHHDKL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KVX1 Uncharacterized protein

8.5e-124

89.49

Show/hide

Query:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE
        MSI+ ISPTPGL +CS+DQFTL NRLS+VSL FS P RTISLP G NF+ R N  VHFE  TLL KP RLAF+FS RAADSTQPS+VSASP KAVVTDDE
Subjt:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFE+RQ
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

A0A1S3CAR1 thylakoid membrane protein slr0575

1.2e-122

88.72

Show/hide

Query:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE
        MSI+ ISPTPGL + S+ QFTL NRLS++SL FS P R I LP GGNF+ R N  VHFE +TLL KP RLAFTFS RAADSTQPS+VSASPDKAVVTDDE
Subjt:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

A0A5A7TDN5 Thylakoid membrane protein

3.2e-123

89.11

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Query:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE
        MSI+ ISPTPGL + S+ QFTL NRLS++SL FS P R ISLP GGNF+ R N  VHFE +TLL KP RLAFTFS RAADSTQPS+VSASPDKAVVTDDE
Subjt:  MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDE

Query:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
        FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL
Subjt:  FSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHL

Query:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        DEALKRIFQYGLAGGIPRRSAPIL+SIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
Subjt:  DEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

A0A6J1GWV5 uncharacterized protein LOC111458174

1.5e-120

88.63

Show/hide

Query:  ISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFS
        +SGISP   L  CS+D+FTL NRLS+VSLRFS PY   SLP GGN  GR NF VHFEPR  LQKPQRLAFTFSARAAD+TQPSSVSASPDKAVVTDDEFS
Subjt:  ISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE

Query:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFE+RQ
Subjt:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

A0A6J1JQQ4 uncharacterized protein LOC111486968

1.7e-119

87.84

Show/hide

Query:  ISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFS
        +SGISP   L  CS+D+FTL NRLS+VSLRFS PY   SLP GGN  GR NF VH EPR  LQKPQRLAFTFSARAAD+TQPSSVSASPDKAVVTDDEFS
Subjt:  ISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFS

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE
        LAKVSFGVIGLGVG+SLLSYGFGAYFNILPGSEWSA+MLTYGFPLAIIGMALKYAELKPVPCLTYL+AQKLRE+CATPILKQVRDDVIR+RYGDEQHLDE
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDE

Query:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        ALKRIFQ+GLAGGIPRRSAPILQSIREEVTEDGKYCLVL+FEAKALTLSDFE+RQ
Subjt:  ALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

SwissProt top hits

e value

%identity

Alignment

Q55403 Thylakoid membrane protein slr0575

1.0e-17

40.12

Show/hide

Query:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLT---YGFPLAIIGMALKYAELKPVPCLTYLDAQK---LRETCATPILKQVRDDVIRFRYGD
        L K+S   +GL VG  L   GF AY       +++ L L    YG PL + G+ALK AELKP+P  +   ++K   LR   ATP   Q+R DV R+RYG 
Subjt:  LAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLT---YGFPLAIIGMALKYAELKPVPCLTYLDAQK---LRETCATPILKQVRDDVIRFRYGD

Query:  EQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQK
        E HLDE+L+R+   GL+     R  P+L S+ E+  E GKY L L F +  ++L  ++++Q+
Subjt:  EQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQK

Arabidopsis top hits

e value

%identity

Alignment

AT5G38660.1 acclimation of photosynthesis to environment

1.5e-80

76.77

Show/hide

Query:  PRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAEL
        P T L K + L      RAADST  S   AS D+ ++ DDEF+LAK+SFGVIGLG+GVSLLSYGFGAYF ILPG+EWSA+MLTYGFPL+IIGMALKYAEL
Subjt:  PRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAEL

Query:  KPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ
        KPVPCL+Y DA KLRE+CATPIL QVR+DV R+RYGDEQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFE+RQ
Subjt:  KPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQ

AT5G38660.2 acclimation of photosynthesis to environment

1.3e-79

68.24

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Query:  PRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAEL
        P T L K + L      RAADST  S   AS D+ ++ DDEF+LAK+SFGVIGLG+GVSLLSYGFGAYF ILPG+EWSA+MLTYGFPL+IIGMALKYAEL
Subjt:  PRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFSLAKVSFGVIGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAEL

Query:  KPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQKI
        KPVPCL+Y DA KLRE+CATPIL QVR+DV R+RYGDEQHL+EALKRIFQYGL GGIPRRSAPILQ IREEV  DG+YC+VLVFEAKALTLSDFE+RQ  
Subjt:  KPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRSAPILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQKI

Query:  NLIVAQTQILLVLMQNLLLFLDQGSPQKLVRER
                I   + + + + + + SP+KL  ER
Subjt:  NLIVAQTQILLVLMQNLLLFLDQGSPQKLVRER

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCAATCAGCGGAATATCTCCAACTCCTGGTCTCTGTTCTTGCTCCTATGACCAATTCACTCTCGGCAATCGCCTCTCCGTTGTTTCTCTGCGTTTCTCTCCTCCCTA
CCGCACAATTTCCCTTCCTGTTGGTGGCAATTTCCTCGGCAGACCCAACTTTTTGGTACATTTTGAACCGAGAACGCTTCTGCAGAAGCCTCAGCGATTAGCTTTCACAT
TCTCGGCTAGAGCTGCTGATTCTACTCAGCCGTCTTCCGTTTCAGCCTCGCCGGACAAAGCAGTAGTTACCGACGACGAATTCTCGCTTGCGAAAGTTTCATTTGGTGTT
ATTGGCTTAGGTGTTGGGGTTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTCCCTGGATCTGAATGGTCTGCCCTTATGCTAACATATGGCTTCCCTCT
TGCAATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCGCCACCCCAATTCTCAAAC
AGGTAAGAGATGATGTTATTAGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTCTGGCTGGTGGAATTCCTCGAAGGAGT
GCACCTATTTTGCAAAGTATTCGTGAAGAAGTCACAGAAGATGGAAAGTATTGCCTGGTCTTGGTGTTTGAAGCCAAAGCCTTGACATTGTCAGATTTTGAGCAAAGACA
GAAGATTAATTTAATTGTTGCTCAAACCCAAATTTTGCTAGTGCTGATGCAAAATTTGCTTCTTTTTTTGGACCAGGGATCACCGCAGAAGTTGGTAAGGGAGAGAATGA
TTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCATGATAAATTGCTAAAGCTGGTGGCTCCGCTCCTGGCTTCTCCTAAAGTTCTCTTCAAGTTG
CTTTCTGAAAGTATCATCTCCTTTCAGTAG

mRNA sequence

Show/hide mRNA sequence

AATATGGGGACACGTAGTGTAAATTGGCGGGTTAGAGAAACGGATCCGATTCTCGTTTCTTTCTAACCAACCGAGCTTCGCTTTCCATTGGCGTTCTTCAGAGTTTCAGA
GAAAGAGAGAGAGAGTCAATGTCAATCAGCGGAATATCTCCAACTCCTGGTCTCTGTTCTTGCTCCTATGACCAATTCACTCTCGGCAATCGCCTCTCCGTTGTTTCTCT
GCGTTTCTCTCCTCCCTACCGCACAATTTCCCTTCCTGTTGGTGGCAATTTCCTCGGCAGACCCAACTTTTTGGTACATTTTGAACCGAGAACGCTTCTGCAGAAGCCTC
AGCGATTAGCTTTCACATTCTCGGCTAGAGCTGCTGATTCTACTCAGCCGTCTTCCGTTTCAGCCTCGCCGGACAAAGCAGTAGTTACCGACGACGAATTCTCGCTTGCG
AAAGTTTCATTTGGTGTTATTGGCTTAGGTGTTGGGGTTTCTTTGTTGTCGTATGGATTCGGTGCATACTTTAATATCCTCCCTGGATCTGAATGGTCTGCCCTTATGCT
AACATATGGCTTCCCTCTTGCAATTATTGGCATGGCTCTAAAGTATGCTGAACTCAAACCAGTGCCATGCTTGACATACTTAGATGCTCAAAAACTGAGGGAAACATGCG
CCACCCCAATTCTCAAACAGGTAAGAGATGATGTTATTAGGTTCCGTTATGGGGATGAACAACACTTGGATGAGGCATTGAAACGGATTTTCCAGTATGGTCTGGCTGGT
GGAATTCCTCGAAGGAGTGCACCTATTTTGCAAAGTATTCGTGAAGAAGTCACAGAAGATGGAAAGTATTGCCTGGTCTTGGTGTTTGAAGCCAAAGCCTTGACATTGTC
AGATTTTGAGCAAAGACAGAAGATTAATTTAATTGTTGCTCAAACCCAAATTTTGCTAGTGCTGATGCAAAATTTGCTTCTTTTTTTGGACCAGGGATCACCGCAGAAGT
TGGTAAGGGAGAGAATGATTTGTATGAAGTCCGGCTTATTTCTAACACTATTCCCGGTGCTTCACCATGATAAATTGCTAAAGCTGGTGGCTCCGCTCCTGGCTTCTCCT
AAAGTTCTCTTCAAGTTGCTTTCTGAAAGTATCATCTCCTTTCAGTAGCCATTAAAAGGGGGGAATTGAGAAACATGTGTTTTTATGCTCTTTTGGCTTTTGTATATTCT
CTCAAGGGTCAAGTCCACGTGAAACTTCCATTACAGATATCCTATTGTCTCTTCTCTTCCACTCCCCGCTTTTCAATTTTCATCGCTGTAAAAAATGGGATTTTGACTAT
CTCATCGAGGAGAATCACCTCGAGCGAGGGCCCAAATTTCCTAATCGAAGAGTTGGCATCTCCTTCGTCTATGGGTGAGAATCGGGTCGACTAAAGTCTATAATTCAGTT
AAAAATTAGATGGGCCAGGAAAATACTTGTATCGGAAAGTTCTTGCAAATTGCTGCTTTAGAAAGGTGCATTTCTGAATAACACTAGGGCGAGGAATTCGGGTAAACTAA
AGTGTGAAATGAAAACATACATATTCGAAG

Protein sequence

Show/hide protein sequence

MSISGISPTPGLCSCSYDQFTLGNRLSVVSLRFSPPYRTISLPVGGNFLGRPNFLVHFEPRTLLQKPQRLAFTFSARAADSTQPSSVSASPDKAVVTDDEFSLAKVSFGV
IGLGVGVSLLSYGFGAYFNILPGSEWSALMLTYGFPLAIIGMALKYAELKPVPCLTYLDAQKLRETCATPILKQVRDDVIRFRYGDEQHLDEALKRIFQYGLAGGIPRRS
APILQSIREEVTEDGKYCLVLVFEAKALTLSDFEQRQKINLIVAQTQILLVLMQNLLLFLDQGSPQKLVRERMICMKSGLFLTLFPVLHHDKLLKLVAPLLASPKVLFKL
LSESIISFQ

Clc11G05800 (gene) of Watermelon (cordophanus) v2 genome