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Clc11G05890 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc11G05890
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHEAT repeat-containing protein 5B isoform X2
Genome locationClcChr11:5691105..5693756
RNA-Seq ExpressionClc11G05890
SyntenyClc11G05890
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018815433.1 protein SWEETIE isoform X1 [Juglans regia]2.9e-1067.19Show/hide
Query:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        R  +PL   G  + QLESIV+SAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
XP_018815434.1 protein SWEETIE isoform X2 [Juglans regia]2.9e-1067.19Show/hide
Query:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        R  +PL   G  + QLESIV+SAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
XP_022939608.1 protein SWEETIE isoform X1 [Cucurbita moschata]5.0e-1080Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
XP_041007569.1 protein SWEETIE isoform X1 [Juglans microcarpa x Juglans regia]3.9e-1070.49Show/hide
Query:  LPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        +PL   G  + QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  LPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
XP_041007570.1 protein SWEETIE isoform X2 [Juglans microcarpa x Juglans regia]3.9e-1070.49Show/hide
Query:  LPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        +PL   G  + QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  LPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
TrEMBL top hitse value%identityAlignment
A0A2I4E7Q6 protein SWEETIE isoform X11.4e-1067.19Show/hide
Query:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        R  +PL   G  + QLESIV+SAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
A0A2I4E7R4 protein SWEETIE isoform X21.4e-1067.19Show/hide
Query:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        R  +PL   G  + QLESIV+SAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  RFLLPLDN-GEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
A0A5A7T8T6 HEAT repeat-containing protein 5B isoform X22.4e-1080Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
A0A6J1JQS3 protein SWEETIE isoform X12.4e-1080Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
A0A6J1K049 protein SWEETIE isoform X22.4e-1080Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPK+ I L    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
SwissProt top hitse value%identityAlignment
F4HRS2 Protein SWEETIE8.9e-1064Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK+ + +    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
Arabidopsis top hitse value%identityAlignment
AT1G67140.1 HEAT repeat-containing protein6.3e-1164Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK+ + +    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
AT1G67140.2 HEAT repeat-containing protein6.3e-1164Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK+ + +    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
AT1G67140.3 HEAT repeat-containing protein6.3e-1164Show/hide
Query:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY
        QLESIVASA+Q+ P+PLLCF++LSDLISAIDEEPK+ + +    C  A+Y
Subjt:  QLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKD-IELASCNCNSAVY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAGGACTGGGAGAAGGCATATGGGCAGCCTGAATATGGTGAAAAGGAGCGATCGGCAAACGATCGACTAATCAACACGGACTCTGATTCACCGGCTTCAATCGA
CATAGAATTGCCACTCTGCACACTGGAGCAGCTCAATTGTCGATTCCTGCTCCCACTCGACAATGGTGAAGACTTACCTCAGCTAGAATCCATAGTCGCCTCCGCTGCTC
AGCAGCCTCCGGAGCCCCTTCTCTGTTTCGATCTTCTATCCGATCTCATTTCCGCCATCGATGAAGAGCCAAAGGATATAGAGCTCGCATCATGTAATTGTAATTCAGCA
GTGTACGACTGTCGCTGGAACATGGAGGAAATGACACAGTTCATTAATAGTGAAACAAATCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAGGACTGGGAGAAGGCATATGGGCAGCCTGAATATGGTGAAAAGGAGCGATCGGCAAACGATCGACTAATCAACACGGACTCTGATTCACCGGCTTCAATCGA
CATAGAATTGCCACTCTGCACACTGGAGCAGCTCAATTGTCGATTCCTGCTCCCACTCGACAATGGTGAAGACTTACCTCAGCTAGAATCCATAGTCGCCTCCGCTGCTC
AGCAGCCTCCGGAGCCCCTTCTCTGTTTCGATCTTCTATCCGATCTCATTTCCGCCATCGATGAAGAGCCAAAGGATATAGAGCTCGCATCATGTAATTGTAATTCAGCA
GTGTACGACTGTCGCTGGAACATGGAGGAAATGACACAGTTCATTAATAGTGAAACAAATCTCTAG
Protein sequenceShow/hide protein sequence
MLKDWEKAYGQPEYGEKERSANDRLINTDSDSPASIDIELPLCTLEQLNCRFLLPLDNGEDLPQLESIVASAAQQPPEPLLCFDLLSDLISAIDEEPKDIELASCNCNSA
VYDCRWNMEEMTQFINSETNL