CuGenDBv2

Gene ID	Clc11G05960
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	60S ribosomal protein L10-like
Genome location	ClcChr11:5836759..5838999
RNA-Seq Expression	Clc11G05960
Synteny	Clc11G05960
Gene Ontology terms	GO:0000027 - ribosomal large subunit assembly (biological process) GO:0006412 - translation (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001197 - Ribosomal protein L10e IPR016180 - Ribosomal protein L10e/L16 IPR018255 - Ribosomal protein L10e, conserved site IPR036920 - Ribosomal protein L10e/L16 superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578494.1 60S ribosomal protein L10, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-119

89.92

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        AYKA+NKILPDGVNAKLLGCHGPLANRQPGRAFLP+TA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_008459481.1 PREDICTED: 60S ribosomal protein L10-like [Cucumis melo]

2.7e-120

91.18

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_022142890.1 60S ribosomal protein L10-like [Momordica charantia]

1.3e-119

90.76

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
         YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_022148973.1 60S ribosomal protein L10-like [Momordica charantia]

2.3e-119

89.92

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        +YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

XP_038891235.1 60S ribosomal protein L10-like [Benincasa hispida]

1.0e-119

90.76

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQ A
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CAD5 60S ribosomal protein L10-like

1.3e-120

91.18

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A5A7TFE6 60S ribosomal protein L10

5.4e-119

89.5

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
         +K+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1CM71 60S ribosomal protein L10-like

6.4e-120

90.76

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
         YKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1D5K0 60S ribosomal protein L10-like

1.1e-119

89.92

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        +YK+ENKI+PDGVNAKLLGCHGPLANRQPGRAFLPQTA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

A0A6J1FEG0 60S ribosomal protein L10-like

5.4e-119

89.5

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQH+QEALRRAKFKFPGRQKIIVSRKW                     GFTKFSRADYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
        AYKA+NKILPDGVNAKLLGCHGPLANRQPGRAFLP TA
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

SwissProt top hits

e value

%identity

Alignment

P93847 60S ribosomal protein L10

5.6e-113

85.47

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKW                     GFTKFSR DYL
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
         YK+EN+I+PDGVNAKLLG HGPLA RQPGRAFL
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

Q08770 60S ribosomal protein L10-2

3.5e-107

80.34

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                     GFTKF+RADY 
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
          + E +I+PDGVNAK L CHGPLANRQPG AFL
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

Q93VT9 60S ribosomal protein L10-1

9.2e-108

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                     GFTKF+RAD+ 
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP
          + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP

Q9M5M7 60S ribosomal protein L10

2.1e-112

83.61

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKW                     GFTK +RADY 
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
          K+EN+ILPDGVNAKLLGCHG LANR+PGRAF+   A
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

Q9SPB3 60S ribosomal protein L10

1.1e-113

83.76

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGKPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKW                     GFTKF+R DY+
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
         +K++N+ILPDGVNAKLLGCHGPLANRQPG+AF+
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G14320.1 Ribosomal protein L16p/L10e family protein

6.6e-109

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                     GFTKF+RAD+ 
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP
          + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP

AT1G14320.2 Ribosomal protein L16p/L10e family protein

3.9e-69

57.87

Show/hide

Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM                           
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
                                      VLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                     GFTKF+RAD+ 
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP
          + E +++PDGVNAK L CHGPLANRQPG AFLP
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLP

AT1G26910.1 Ribosomal protein L16p/L10e family protein

2.5e-108

80.34

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Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFP+CVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                     GFTKF+RADY 
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL
          + E +I+PDGVNAK L CHGPLANRQPG AFL
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFL

AT1G66580.1 senescence associated gene 24

1.4e-106

78.57

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Query:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML
        RPARCYRQIK KPYPKSR+CRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYM K AGKDAFHLR+RVHPFHVLRINKML
Subjt:  RPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKML

Query:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL
        SCAGADRLQTGMRGAFGK  GTCARVAIGQVLLSVRCKD++  HAQEALRRAKFKFPGRQKIIVSRKW                     GFTKF+RA+Y 
Subjt:  SCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYL

Query:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA
          +A  +I+PDGVNAK L  HGPLANRQPG AF+  T+
Subjt:  AYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

Sequences

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CDS sequence

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ATGGCGGGTTTCTGGTGCCGACGAGGTCAAGTTCGAGTGGGGAGGGACGAGGTAACGCGCGCTCGCCATGGGGAGAAGTACATACAAATTGTTCGTCGTTTTTTCTTGAC
GGAAAATTTAGTTGTTGGAAATGGATGCATTTCCGATTGTTACCATTGGAGACCTGCAAGGTGTTACAGGCAAATTAAAAATAAGCCTTATCCAAAATCCAGATTTTGTC
GTGGTGTCCCTGATCCTAAGATCAGGATCTACGATGTTGGAATGAAAAAGAAGGGTGTGGATGAATTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAGGAAAACGTG
TCGAGTGAGGCTTTGGAAGCTGCTCGGATTGCTTGCAATAAGTATATGGCTAAGTTCGCTGGGAAGGATGCATTCCACTTGAGGGTCAGGGTTCACCCCTTCCATGTTCT
GCGAATTAATAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACTGGTATGAGAGGTGCTTTTGGCAAACCTCAAGGAACCTGTGCAAGAGTGGCCATCGGTCAGG
TTCTTCTTTCAGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAAGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGTCAGAAGATCATTGTCAGCAGGAAG
TGGTATGTCTCAAGAGATTTTTGCAATTTTTTTCTTCTTGTTCAGCTAAAGAAATGCCCTTCTGGGGGATTCACTAAATTCAGTCGGGCTGATTACCTTGCTTACAAGGC
AGAGAACAAAATTCTTCCAGATGGTGTTAACGCCAAGCTTCTTGGATGCCATGGACCTTTAGCCAATCGTCAACCTGGAAGAGCATTTCTACCTCAAACTGCCTAA

mRNA sequence

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Protein sequence

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MAGFWCRRGQVRVGRDEVTRARHGEKYIQIVRRFFLTENLVVGNGCISDCYHWRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRK
WYVSRDFCNFFLLVQLKKCPSGGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLPQTA

Clc11G05960 (gene) of Watermelon (cordophanus) v2 genome